Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.33□□□□□ -1.88
GPC3P51654 USP9YP22-201ENST00000438971 294 ntBASIC3.33□□□□□ -1.88
GPC3P51654 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.33□□□□□ -1.88
GPC3P51654 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
GPC3P51654 AC079776.3-201ENST00000450665 370 ntBASIC3.33□□□□□ -1.88
GPC3P51654 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.33□□□□□ -1.88
GPC3P51654 SNORA59A-201ENST00000459326 152 ntBASIC3.33□□□□□ -1.88
GPC3P51654 RPS29P26-201ENST00000477483 171 ntBASIC3.33□□□□□ -1.88
GPC3P51654 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
GPC3P51654 AL359273.1-201ENST00000510918 627 ntBASIC3.33□□□□□ -1.88
GPC3P51654 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.33□□□□□ -1.88
GPC3P51654 SNORA70.16-201ENST00000516390 95 ntBASIC3.33□□□□□ -1.88
GPC3P51654 AC245166.1-201ENST00000521012 253 ntBASIC3.33□□□□□ -1.88
GPC3P51654 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
GPC3P51654 OR5AK1P-201ENST00000524837 922 ntBASIC3.33□□□□□ -1.88
GPC3P51654 DEFB108D-201ENST00000527787 222 ntBASIC3.33□□□□□ -1.88
GPC3P51654 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.33□□□□□ -1.88
GPC3P51654 MIR3921-201ENST00000577308 85 ntBASIC3.33□□□□□ -1.88
GPC3P51654 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.33□□□□□ -1.88
GPC3P51654 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.33□□□□□ -1.88
GPC3P51654 AC015688.2-201ENST00000584523 262 ntBASIC3.33□□□□□ -1.88
GPC3P51654 MIR4506-201ENST00000584693 77 ntBASIC3.33□□□□□ -1.88
GPC3P51654 AC078899.3-201ENST00000599065 212 ntBASIC3.33□□□□□ -1.88
GPC3P51654 AC004009.2-201ENST00000623016 728 ntBASIC3.33□□□□□ -1.88
GPC3P51654 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
GPC3P51654 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
GPC3P51654 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
GPC3P51654 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.32□□□□□ -1.88
GPC3P51654 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
GPC3P51654 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
GPC3P51654 RNU6-216P-201ENST00000363282 104 ntBASIC3.32□□□□□ -1.88
GPC3P51654 RNU5E-10P-201ENST00000363506 118 ntBASIC3.32□□□□□ -1.88
GPC3P51654 CD24P4-201ENST00000382840 243 ntBASIC3.32□□□□□ -1.88
GPC3P51654 AL356131.1-201ENST00000405826 414 ntBASIC3.32□□□□□ -1.88
GPC3P51654 RNU2-43P-201ENST00000410306 190 ntBASIC3.32□□□□□ -1.88
GPC3P51654 EEF1A1P41-201ENST00000414667 207 ntBASIC3.32□□□□□ -1.88
GPC3P51654 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.32□□□□□ -1.88
GPC3P51654 SDCBPP3-201ENST00000419629 891 ntBASIC3.32□□□□□ -1.88
GPC3P51654 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC3.32□□□□□ -1.88
GPC3P51654 TRIM60P18-201ENST00000441518 828 ntBASIC3.32□□□□□ -1.88
GPC3P51654 AC025750.2-201ENST00000442609 450 ntBASIC3.32□□□□□ -1.88
GPC3P51654 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.32□□□□□ -1.88
GPC3P51654 snoU109.3-201ENST00000459477 145 ntBASIC3.32□□□□□ -1.88
GPC3P51654 AC069528.1-202ENST00000482888 637 ntBASIC3.32□□□□□ -1.88
GPC3P51654 RN7SL283P-201ENST00000489055 303 ntBASIC3.32□□□□□ -1.88
GPC3P51654 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.32□□□□□ -1.88
GPC3P51654 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
GPC3P51654 AC239860.2-201ENST00000525886 270 ntBASIC3.32□□□□□ -1.88
GPC3P51654 AP000889.1-201ENST00000530968 660 ntBASIC3.32□□□□□ -1.88
GPC3P51654 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.32□□□□□ -1.88
GPC3P51654 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.32□□□□□ -1.88
GPC3P51654 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.32□□□□□ -1.88
GPC3P51654 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.32□□□□□ -1.88
GPC3P51654 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.32□□□□□ -1.88
GPC3P51654 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.32□□□□□ -1.88
GPC3P51654 MIR4637-201ENST00000582405 84 ntBASIC3.32□□□□□ -1.88
GPC3P51654 AL606834.3-201ENST00000602615 496 ntBASIC3.32□□□□□ -1.88
GPC3P51654 DUXAP11-201ENST00000603858 526 ntBASIC3.32□□□□□ -1.88
GPC3P51654 AC144521.1-201ENST00000607148 956 ntBASIC3.32□□□□□ -1.88
GPC3P51654 AC092953.2-201ENST00000608000 699 ntBASIC3.32□□□□□ -1.88
GPC3P51654 AC009269.6-201ENST00000621778 588 ntBASIC3.32□□□□□ -1.88
GPC3P51654 OR1S1-201ENST00000624470 978 ntBASIC3.32□□□□□ -1.88
GPC3P51654 SCARNA15.3-201ENST00000626315 122 ntBASIC3.32□□□□□ -1.88
GPC3P51654 SCARNA4.1-201ENST00000628597 123 ntBASIC3.32□□□□□ -1.88
GPC3P51654 AC097714.1-201ENST00000511272 1647 ntBASIC3.32□□□□□ -1.88
GPC3P51654 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
GPC3P51654 AC008568.2-201ENST00000623862 2313 ntBASIC3.32□□□□□ -1.88
GPC3P51654 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
GPC3P51654 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
GPC3P51654 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.31□□□□□ -1.88
GPC3P51654 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
GPC3P51654 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
GPC3P51654 CDR1-202ENST00000625883 1485 ntBASIC3.31□□□□□ -1.88
GPC3P51654 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
GPC3P51654 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
GPC3P51654 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.31□□□□□ -1.88
GPC3P51654 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
GPC3P51654 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
GPC3P51654 RNU6-799P-201ENST00000363567 107 ntBASIC3.31□□□□□ -1.88
GPC3P51654 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.31□□□□□ -1.88
GPC3P51654 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.31□□□□□ -1.88
GPC3P51654 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.31□□□□□ -1.88
GPC3P51654 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.31□□□□□ -1.88
GPC3P51654 AC024082.2-201ENST00000434771 238 ntBASIC3.31□□□□□ -1.88
GPC3P51654 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.31□□□□□ -1.88
GPC3P51654 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.31□□□□□ -1.88
GPC3P51654 AL358794.1-201ENST00000445689 381 ntBASIC3.31□□□□□ -1.88
GPC3P51654 AC112492.1-201ENST00000449607 712 ntBASIC3.31□□□□□ -1.88
GPC3P51654 MTATP6P14-201ENST00000455189 673 ntBASIC3.31□□□□□ -1.88
GPC3P51654 AL359385.1-201ENST00000456509 365 ntBASIC3.31□□□□□ -1.88
GPC3P51654 AL031183.1-201ENST00000457667 207 ntBASIC3.31□□□□□ -1.88
GPC3P51654 RPS26P21-201ENST00000475397 348 ntBASIC3.31□□□□□ -1.88
GPC3P51654 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.31□□□□□ -1.88
GPC3P51654 RN7SL20P-201ENST00000488827 297 ntBASIC3.31□□□□□ -1.88
GPC3P51654 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.31□□□□□ -1.88
GPC3P51654 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.31□□□□□ -1.88
GPC3P51654 SCARNA1-201ENST00000517138 166 ntBASIC3.31□□□□□ -1.88
GPC3P51654 AC103783.1-201ENST00000520506 373 ntBASIC3.31□□□□□ -1.88
GPC3P51654 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.31□□□□□ -1.88
GPC3P51654 HSPE1P3-201ENST00000559254 309 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms