Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 OR6C5P-201ENST00000452388 923 ntBASIC3.47□□□□□ -1.85
LHX1P48742 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.47□□□□□ -1.85
LHX1P48742 AC072039.1-201ENST00000477611 581 ntBASIC3.47□□□□□ -1.85
LHX1P48742 AL049830.2-201ENST00000480072 201 ntBASIC3.47□□□□□ -1.85
LHX1P48742 HMGB1P36-201ENST00000487709 576 ntBASIC3.47□□□□□ -1.85
LHX1P48742 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.47□□□□□ -1.85
LHX1P48742 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.47□□□□□ -1.85
LHX1P48742 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.47□□□□□ -1.85
LHX1P48742 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.47□□□□□ -1.85
LHX1P48742 LTV1P1-201ENST00000510683 1237 ntBASIC3.47□□□□□ -1.85
LHX1P48742 AC021146.1-201ENST00000511202 716 ntBASIC3.47□□□□□ -1.85
LHX1P48742 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.47□□□□□ -1.85
LHX1P48742 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.47□□□□□ -1.85
LHX1P48742 MIR2276-201ENST00000516886 89 ntBASIC3.47□□□□□ -1.85
LHX1P48742 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LHX1P48742 MIR5047-201ENST00000579212 100 ntBASIC3.47□□□□□ -1.85
LHX1P48742 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.47□□□□□ -1.85
LHX1P48742 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.47□□□□□ -1.85
LHX1P48742 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.47□□□□□ -1.85
LHX1P48742 ZNF415P1-201ENST00000582279 1166 ntBASIC3.47□□□□□ -1.85
LHX1P48742 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.47□□□□□ -1.85
LHX1P48742 AC007671.2-201ENST00000637344 619 ntBASIC3.47□□□□□ -1.85
LHX1P48742 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LHX1P48742 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
LHX1P48742 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
LHX1P48742 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
LHX1P48742 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LHX1P48742 AP001486.2-201ENST00000561652 5113 ntBASIC3.47□□□□□ -1.85
LHX1P48742 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
LHX1P48742 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.47□□□□□ -1.85
LHX1P48742 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.47□□□□□ -1.85
LHX1P48742 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
LHX1P48742 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
LHX1P48742 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
LHX1P48742 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
LHX1P48742 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
LHX1P48742 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
LHX1P48742 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
LHX1P48742 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.46□□□□□ -1.86
LHX1P48742 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
LHX1P48742 MIR30E-201ENST00000362104 92 ntBASIC3.46□□□□□ -1.86
LHX1P48742 RNU6-1155P-201ENST00000363554 107 ntBASIC3.46□□□□□ -1.86
LHX1P48742 MIR491-201ENST00000384877 84 ntBASIC3.46□□□□□ -1.86
LHX1P48742 AL049545.1-201ENST00000401856 572 ntBASIC3.46□□□□□ -1.86
LHX1P48742 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.46□□□□□ -1.86
LHX1P48742 RNU6-55P-201ENST00000411092 107 ntBASIC3.46□□□□□ -1.86
LHX1P48742 RNU6-954P-201ENST00000411355 107 ntBASIC3.46□□□□□ -1.86
LHX1P48742 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.46□□□□□ -1.86
LHX1P48742 AL353678.1-201ENST00000422735 741 ntBASIC3.46□□□□□ -1.86
LHX1P48742 MTND4P20-201ENST00000424125 869 ntBASIC3.46□□□□□ -1.86
LHX1P48742 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.46□□□□□ -1.86
LHX1P48742 RPL23AP83-201ENST00000434984 473 ntBASIC3.46□□□□□ -1.86
LHX1P48742 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.46□□□□□ -1.86
LHX1P48742 CST9LP2-201ENST00000437612 320 ntBASIC3.46□□□□□ -1.86
LHX1P48742 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.46□□□□□ -1.86
LHX1P48742 LSM1P1-201ENST00000438629 273 ntBASIC3.46□□□□□ -1.86
LHX1P48742 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.46□□□□□ -1.86
LHX1P48742 snoU13.4-201ENST00000458916 104 ntBASIC3.46□□□□□ -1.86
LHX1P48742 RPL9P32-201ENST00000464118 620 ntBASIC3.46□□□□□ -1.86
LHX1P48742 AC096751.1-202ENST00000502691 1067 ntBASIC3.46□□□□□ -1.86
LHX1P48742 AC026427.2-201ENST00000506228 536 ntBASIC3.46□□□□□ -1.86
LHX1P48742 ARL2BPP6-201ENST00000512757 439 ntBASIC3.46□□□□□ -1.86
LHX1P48742 PHBP14-201ENST00000512887 367 ntBASIC3.46□□□□□ -1.86
LHX1P48742 MRPS33P3-201ENST00000513456 322 ntBASIC3.46□□□□□ -1.86
LHX1P48742 RNU6-714P-201ENST00000516963 103 ntBASIC3.46□□□□□ -1.86
LHX1P48742 RN7SKP60-201ENST00000516985 239 ntBASIC3.46□□□□□ -1.86
LHX1P48742 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.46□□□□□ -1.86
LHX1P48742 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.46□□□□□ -1.86
LHX1P48742 MIR5004-201ENST00000579078 107 ntBASIC3.46□□□□□ -1.86
LHX1P48742 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.46□□□□□ -1.86
LHX1P48742 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.46□□□□□ -1.86
LHX1P48742 AL360219.1-201ENST00000610230 366 ntBASIC3.46□□□□□ -1.86
LHX1P48742 AC012531.5-201ENST00000611375 151 ntBASIC3.46□□□□□ -1.86
LHX1P48742 AL590099.1-201ENST00000615276 138 ntBASIC3.46□□□□□ -1.86
LHX1P48742 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
LHX1P48742 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.45□□□□□ -1.86
LHX1P48742 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
LHX1P48742 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.45□□□□□ -1.86
LHX1P48742 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
LHX1P48742 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LHX1P48742 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LHX1P48742 RNU6-97P-201ENST00000363387 104 ntBASIC3.45□□□□□ -1.86
LHX1P48742 RNU6-744P-201ENST00000365557 107 ntBASIC3.45□□□□□ -1.86
LHX1P48742 RNU6-1316P-201ENST00000384242 108 ntBASIC3.45□□□□□ -1.86
LHX1P48742 RPS3AP26-201ENST00000398259 784 ntBASIC3.45□□□□□ -1.86
LHX1P48742 AL356421.1-201ENST00000403255 413 ntBASIC3.45□□□□□ -1.86
LHX1P48742 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.45□□□□□ -1.86
LHX1P48742 VPS26BP1-201ENST00000417155 755 ntBASIC3.45□□□□□ -1.86
LHX1P48742 MTATP6P17-201ENST00000431030 672 ntBASIC3.45□□□□□ -1.86
LHX1P48742 OR6K5P-201ENST00000447050 945 ntBASIC3.45□□□□□ -1.86
LHX1P48742 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.45□□□□□ -1.86
LHX1P48742 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.45□□□□□ -1.86
LHX1P48742 Z99127.3-201ENST00000448158 395 ntBASIC3.45□□□□□ -1.86
LHX1P48742 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.45□□□□□ -1.86
LHX1P48742 ELOCP23-201ENST00000452014 332 ntBASIC3.45□□□□□ -1.86
LHX1P48742 ART2BP-201ENST00000453501 499 ntBASIC3.45□□□□□ -1.86
LHX1P48742 HMGN2P7-201ENST00000456186 273 ntBASIC3.45□□□□□ -1.86
LHX1P48742 CEACAMP4-201ENST00000457676 421 ntBASIC3.45□□□□□ -1.86
LHX1P48742 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.45□□□□□ -1.86
LHX1P48742 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms