Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 RNU4-65P-201ENST00000410473 140 ntBASIC3.7□□□□□ -1.82
SOX2P48431 RNA5SP107-201ENST00000411358 122 ntBASIC3.7□□□□□ -1.82
SOX2P48431 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.7□□□□□ -1.82
SOX2P48431 AC009237.5-201ENST00000414271 501 ntBASIC3.7□□□□□ -1.82
SOX2P48431 AC138393.2-201ENST00000414742 246 ntBASIC3.7□□□□□ -1.82
SOX2P48431 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC3.7□□□□□ -1.82
SOX2P48431 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.7□□□□□ -1.82
SOX2P48431 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.7□□□□□ -1.82
SOX2P48431 USP9YP9-201ENST00000429406 715 ntBASIC3.7□□□□□ -1.82
SOX2P48431 AL606489.2-201ENST00000433886 234 ntBASIC3.7□□□□□ -1.82
SOX2P48431 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.7□□□□□ -1.82
SOX2P48431 RPS20P5-201ENST00000434808 360 ntBASIC3.7□□□□□ -1.82
SOX2P48431 SEPT14P3-201ENST00000439401 183 ntBASIC3.7□□□□□ -1.82
SOX2P48431 RPS15AP9-201ENST00000439856 381 ntBASIC3.7□□□□□ -1.82
SOX2P48431 CALM1P1-201ENST00000442082 433 ntBASIC3.7□□□□□ -1.82
SOX2P48431 AL732372.2-207ENST00000445840 183 ntBASIC3.7□□□□□ -1.82
SOX2P48431 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.7□□□□□ -1.82
SOX2P48431 AL162591.2-201ENST00000449634 317 ntBASIC3.7□□□□□ -1.82
SOX2P48431 AC006480.1-201ENST00000449887 378 ntBASIC3.7□□□□□ -1.82
SOX2P48431 SEPT14P2-201ENST00000453405 183 ntBASIC3.7□□□□□ -1.82
SOX2P48431 RNU6-261P-201ENST00000459506 102 ntBASIC3.7□□□□□ -1.82
SOX2P48431 AC010326.1-201ENST00000462726 602 ntBASIC3.7□□□□□ -1.82
SOX2P48431 RN7SL354P-201ENST00000469282 294 ntBASIC3.7□□□□□ -1.82
SOX2P48431 AC093278.1-201ENST00000494700 600 ntBASIC3.7□□□□□ -1.82
SOX2P48431 NDUFB5P1-201ENST00000508134 564 ntBASIC3.7□□□□□ -1.82
SOX2P48431 SEPT14P4-201ENST00000513445 186 ntBASIC3.7□□□□□ -1.82
SOX2P48431 AC026801.2-201ENST00000515352 425 ntBASIC3.7□□□□□ -1.82
SOX2P48431 RNU7-51P-201ENST00000516560 62 ntBASIC3.7□□□□□ -1.82
SOX2P48431 RNU6-64P-201ENST00000517119 105 ntBASIC3.7□□□□□ -1.82
SOX2P48431 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.7□□□□□ -1.82
SOX2P48431 FO082796.1-201ENST00000523795 183 ntBASIC3.7□□□□□ -1.82
SOX2P48431 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SOX2P48431 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.7□□□□□ -1.82
SOX2P48431 AP001922.4-201ENST00000526967 290 ntBASIC3.7□□□□□ -1.82
SOX2P48431 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.7□□□□□ -1.82
SOX2P48431 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.7□□□□□ -1.82
SOX2P48431 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.7□□□□□ -1.82
SOX2P48431 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.7□□□□□ -1.82
SOX2P48431 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.7□□□□□ -1.82
SOX2P48431 AC126177.3-201ENST00000551839 688 ntBASIC3.7□□□□□ -1.82
SOX2P48431 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.7□□□□□ -1.82
SOX2P48431 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC3.7□□□□□ -1.82
SOX2P48431 AC034105.3-201ENST00000565294 442 ntBASIC3.7□□□□□ -1.82
SOX2P48431 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC3.7□□□□□ -1.82
SOX2P48431 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.7□□□□□ -1.82
SOX2P48431 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.7□□□□□ -1.82
SOX2P48431 AC092794.2-201ENST00000620933 563 ntBASIC3.7□□□□□ -1.82
SOX2P48431 MIR7702-201ENST00000621931 59 ntBASIC3.7□□□□□ -1.82
SOX2P48431 MIR6719-201ENST00000622428 87 ntBASIC3.7□□□□□ -1.82
SOX2P48431 AL136313.1-201ENST00000624804 202 ntBASIC3.7□□□□□ -1.82
SOX2P48431 MIR3662-201ENST00000637030 95 ntBASIC3.7□□□□□ -1.82
SOX2P48431 CASC19-280ENST00000642102 1351 ntBASIC3.7□□□□□ -1.82
SOX2P48431 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.7□□□□□ -1.82
SOX2P48431 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.7□□□□□ -1.82
SOX2P48431 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.7□□□□□ -1.82
SOX2P48431 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
SOX2P48431 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SOX2P48431 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.69□□□□□ -1.82
SOX2P48431 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.69□□□□□ -1.82
SOX2P48431 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.69□□□□□ -1.82
SOX2P48431 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SOX2P48431 XIAPP3-201ENST00000312918 795 ntBASIC3.69□□□□□ -1.82
SOX2P48431 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.69□□□□□ -1.82
SOX2P48431 Y_RNA.38-201ENST00000362617 102 ntBASIC3.69□□□□□ -1.82
SOX2P48431 SNORA72.1-201ENST00000363485 129 ntBASIC3.69□□□□□ -1.82
SOX2P48431 RNU6-511P-201ENST00000363496 107 ntBASIC3.69□□□□□ -1.82
SOX2P48431 RNU6-1155P-201ENST00000363554 107 ntBASIC3.69□□□□□ -1.82
SOX2P48431 SNORD113.2-201ENST00000364166 89 ntBASIC3.69□□□□□ -1.82
SOX2P48431 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
SOX2P48431 RNU6-74P-201ENST00000384235 107 ntBASIC3.69□□□□□ -1.82
SOX2P48431 RNU6-39P-201ENST00000384344 107 ntBASIC3.69□□□□□ -1.82
SOX2P48431 MIR124-3-201ENST00000384866 87 ntBASIC3.69□□□□□ -1.82
SOX2P48431 MIR558-201ENST00000384920 94 ntBASIC3.69□□□□□ -1.82
SOX2P48431 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SOX2P48431 RNU6-1158P-201ENST00000391167 107 ntBASIC3.69□□□□□ -1.82
SOX2P48431 AL583834.1-201ENST00000406943 343 ntBASIC3.69□□□□□ -1.82
SOX2P48431 RAP1BP3-201ENST00000407180 549 ntBASIC3.69□□□□□ -1.82
SOX2P48431 MIR1179-201ENST00000408703 91 ntBASIC3.69□□□□□ -1.82
SOX2P48431 RNU6-908P-201ENST00000410160 94 ntBASIC3.69□□□□□ -1.82
SOX2P48431 RN7SKP159-201ENST00000410657 292 ntBASIC3.69□□□□□ -1.82
SOX2P48431 TMSB10P2-201ENST00000416049 131 ntBASIC3.69□□□□□ -1.82
SOX2P48431 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.69□□□□□ -1.82
SOX2P48431 SNRPEP10-201ENST00000420249 274 ntBASIC3.69□□□□□ -1.82
SOX2P48431 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.69□□□□□ -1.82
SOX2P48431 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.69□□□□□ -1.82
SOX2P48431 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.69□□□□□ -1.82
SOX2P48431 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.69□□□□□ -1.82
SOX2P48431 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.69□□□□□ -1.82
SOX2P48431 MED13P1-201ENST00000428342 171 ntBASIC3.69□□□□□ -1.82
SOX2P48431 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.69□□□□□ -1.82
SOX2P48431 AL121871.1-201ENST00000443413 436 ntBASIC3.69□□□□□ -1.82
SOX2P48431 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.69□□□□□ -1.82
SOX2P48431 DDX3P2-201ENST00000446138 111 ntBASIC3.69□□□□□ -1.82
SOX2P48431 AC016696.1-201ENST00000446949 318 ntBASIC3.69□□□□□ -1.82
SOX2P48431 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.69□□□□□ -1.82
SOX2P48431 AC114755.5-201ENST00000447760 831 ntBASIC3.69□□□□□ -1.82
SOX2P48431 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.69□□□□□ -1.82
SOX2P48431 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.69□□□□□ -1.82
SOX2P48431 RPS29P19-201ENST00000479709 171 ntBASIC3.69□□□□□ -1.82
SOX2P48431 RPL32P9-201ENST00000487963 407 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms