Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 RNA5SP309-201ENST00000516670 106 ntBASIC3.85□□□□□ -1.79
PTPN9P43378 AC008489.1-201ENST00000524271 483 ntBASIC3.85□□□□□ -1.79
PTPN9P43378 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.85□□□□□ -1.79
PTPN9P43378 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.85□□□□□ -1.79
PTPN9P43378 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.85□□□□□ -1.79
PTPN9P43378 AC018630.1-201ENST00000541376 925 ntBASIC3.85□□□□□ -1.79
PTPN9P43378 AC008011.1-201ENST00000545989 227 ntBASIC3.85□□□□□ -1.79
PTPN9P43378 CR383656.7-201ENST00000548164 174 ntBASIC3.85□□□□□ -1.79
PTPN9P43378 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.85□□□□□ -1.79
PTPN9P43378 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.85□□□□□ -1.79
PTPN9P43378 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.85□□□□□ -1.79
PTPN9P43378 KLKP1-201ENST00000595979 403 ntBASIC3.85□□□□□ -1.79
PTPN9P43378 AC078795.2-201ENST00000602835 1252 ntBASIC3.85□□□□□ -1.79
PTPN9P43378 AC011468.4-201ENST00000603942 409 ntBASIC3.85□□□□□ -1.79
PTPN9P43378 AL049634.3-201ENST00000604968 457 ntBASIC3.85□□□□□ -1.79
PTPN9P43378 AL139286.2-201ENST00000606838 396 ntBASIC3.85□□□□□ -1.79
PTPN9P43378 AL590099.1-201ENST00000615276 138 ntBASIC3.85□□□□□ -1.79
PTPN9P43378 AC138932.5-201ENST00000617759 563 ntBASIC3.85□□□□□ -1.79
PTPN9P43378 AL161637.1-201ENST00000622380 412 ntBASIC3.85□□□□□ -1.79
PTPN9P43378 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.85□□□□□ -1.79
PTPN9P43378 AC244205.2-202ENST00000635781 342 ntBASIC3.85□□□□□ -1.79
PTPN9P43378 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
PTPN9P43378 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PTPN9P43378 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
PTPN9P43378 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PTPN9P43378 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PTPN9P43378 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PTPN9P43378 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PTPN9P43378 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PTPN9P43378 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.84□□□□□ -1.79
PTPN9P43378 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.84□□□□□ -1.79
PTPN9P43378 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PTPN9P43378 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PTPN9P43378 AC092125.1-201ENST00000562568 1995 ntBASIC3.84□□□□□ -1.79
PTPN9P43378 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
PTPN9P43378 RNU6-1249P-201ENST00000363237 111 ntBASIC3.84□□□□□ -1.79
PTPN9P43378 Y_RNA.359-201ENST00000365498 102 ntBASIC3.84□□□□□ -1.79
PTPN9P43378 RPL7P60-201ENST00000397636 735 ntBASIC3.84□□□□□ -1.79
PTPN9P43378 MTHFD2P2-201ENST00000407725 247 ntBASIC3.84□□□□□ -1.79
PTPN9P43378 RNU4-78P-201ENST00000410940 126 ntBASIC3.84□□□□□ -1.79
PTPN9P43378 AC009237.5-201ENST00000414271 501 ntBASIC3.84□□□□□ -1.79
PTPN9P43378 RPS7P15-201ENST00000415804 584 ntBASIC3.84□□□□□ -1.79
PTPN9P43378 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.84□□□□□ -1.79
PTPN9P43378 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.84□□□□□ -1.79
PTPN9P43378 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.84□□□□□ -1.79
PTPN9P43378 RPL22P17-201ENST00000438729 315 ntBASIC3.84□□□□□ -1.79
PTPN9P43378 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.84□□□□□ -1.79
PTPN9P43378 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.84□□□□□ -1.79
PTPN9P43378 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
PTPN9P43378 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.84□□□□□ -1.79
PTPN9P43378 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
PTPN9P43378 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.84□□□□□ -1.79
PTPN9P43378 Vault.1-201ENST00000516474 102 ntBASIC3.84□□□□□ -1.79
PTPN9P43378 MTCYBP20-201ENST00000524239 1129 ntBASIC3.84□□□□□ -1.79
PTPN9P43378 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.84□□□□□ -1.79
PTPN9P43378 RPL21P5-201ENST00000554662 472 ntBASIC3.84□□□□□ -1.79
PTPN9P43378 AC034268.2-201ENST00000571784 482 ntBASIC3.84□□□□□ -1.79
PTPN9P43378 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.84□□□□□ -1.79
PTPN9P43378 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.84□□□□□ -1.79
PTPN9P43378 AC009977.1-201ENST00000586015 570 ntBASIC3.84□□□□□ -1.79
PTPN9P43378 UBE2L4-201ENST00000587688 464 ntBASIC3.84□□□□□ -1.79
PTPN9P43378 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.84□□□□□ -1.79
PTPN9P43378 AC006254.3-201ENST00000603353 884 ntBASIC3.84□□□□□ -1.79
PTPN9P43378 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.84□□□□□ -1.79
PTPN9P43378 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.84□□□□□ -1.79
PTPN9P43378 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.84□□□□□ -1.79
PTPN9P43378 OR10AB1P-201ENST00000609613 938 ntBASIC3.84□□□□□ -1.79
PTPN9P43378 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.84□□□□□ -1.79
PTPN9P43378 AC087241.4-201ENST00000612441 480 ntBASIC3.84□□□□□ -1.79
PTPN9P43378 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.84□□□□□ -1.79
PTPN9P43378 AC015540.1-201ENST00000615828 501 ntBASIC3.84□□□□□ -1.79
PTPN9P43378 AL158801.5-201ENST00000623123 465 ntBASIC3.84□□□□□ -1.79
PTPN9P43378 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PTPN9P43378 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.84□□□□□ -1.8
PTPN9P43378 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
PTPN9P43378 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
PTPN9P43378 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
PTPN9P43378 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
PTPN9P43378 RNU4-75P-201ENST00000364621 146 ntBASIC3.83□□□□□ -1.8
PTPN9P43378 RNU1-64P-201ENST00000365443 163 ntBASIC3.83□□□□□ -1.8
PTPN9P43378 RNU6-1042P-201ENST00000384204 107 ntBASIC3.83□□□□□ -1.8
PTPN9P43378 RNU6-297P-201ENST00000384636 107 ntBASIC3.83□□□□□ -1.8
PTPN9P43378 RPS3AP3-201ENST00000411933 242 ntBASIC3.83□□□□□ -1.8
PTPN9P43378 MTND1P21-201ENST00000412991 285 ntBASIC3.83□□□□□ -1.8
PTPN9P43378 AC092447.6-201ENST00000414578 210 ntBASIC3.83□□□□□ -1.8
PTPN9P43378 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.83□□□□□ -1.8
PTPN9P43378 RPL17P36-201ENST00000420302 549 ntBASIC3.83□□□□□ -1.8
PTPN9P43378 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.83□□□□□ -1.8
PTPN9P43378 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
PTPN9P43378 AL049734.2-201ENST00000441066 616 ntBASIC3.83□□□□□ -1.8
PTPN9P43378 MTND6P13-201ENST00000443510 523 ntBASIC3.83□□□□□ -1.8
PTPN9P43378 HMGN2P21-201ENST00000447764 270 ntBASIC3.83□□□□□ -1.8
PTPN9P43378 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.83□□□□□ -1.8
PTPN9P43378 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.83□□□□□ -1.8
PTPN9P43378 MTCYBP1-201ENST00000454315 1119 ntBASIC3.83□□□□□ -1.8
PTPN9P43378 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.83□□□□□ -1.8
PTPN9P43378 ACTR3P3-201ENST00000480448 893 ntBASIC3.83□□□□□ -1.8
PTPN9P43378 UBE2CP3-201ENST00000502715 450 ntBASIC3.83□□□□□ -1.8
PTPN9P43378 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.83□□□□□ -1.8
PTPN9P43378 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms