Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.43□□□□□ -1.86
CTNNA1P35221 TRAV37-201ENST00000553906 342 ntBASIC3.43□□□□□ -1.86
CTNNA1P35221 AL132857.1-201ENST00000555180 708 ntBASIC3.43□□□□□ -1.86
CTNNA1P35221 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.43□□□□□ -1.86
CTNNA1P35221 DUXAP4-201ENST00000603046 613 ntBASIC3.43□□□□□ -1.86
CTNNA1P35221 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.43□□□□□ -1.86
CTNNA1P35221 AL161629.2-201ENST00000615347 275 ntBASIC3.43□□□□□ -1.86
CTNNA1P35221 AC244258.1-201ENST00000637553 1071 ntBASIC3.43□□□□□ -1.86
CTNNA1P35221 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CTNNA1P35221 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CTNNA1P35221 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
CTNNA1P35221 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.43□□□□□ -1.86
CTNNA1P35221 API5P2-201ENST00000397055 1498 ntBASIC3.42□□□□□ -1.86
CTNNA1P35221 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CTNNA1P35221 USP9YP33-201ENST00000412220 421 ntBASIC3.42□□□□□ -1.86
CTNNA1P35221 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.42□□□□□ -1.86
CTNNA1P35221 AC069157.1-201ENST00000421749 137 ntBASIC3.42□□□□□ -1.86
CTNNA1P35221 AL513175.2-201ENST00000422071 443 ntBASIC3.42□□□□□ -1.86
CTNNA1P35221 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.42□□□□□ -1.86
CTNNA1P35221 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.42□□□□□ -1.86
CTNNA1P35221 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.42□□□□□ -1.86
CTNNA1P35221 AL353705.1-201ENST00000433468 480 ntBASIC3.42□□□□□ -1.86
CTNNA1P35221 AC007389.2-201ENST00000434630 306 ntBASIC3.42□□□□□ -1.86
CTNNA1P35221 USP9YP35-201ENST00000435696 412 ntBASIC3.42□□□□□ -1.86
CTNNA1P35221 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.42□□□□□ -1.86
CTNNA1P35221 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC3.42□□□□□ -1.86
CTNNA1P35221 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.42□□□□□ -1.86
CTNNA1P35221 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.42□□□□□ -1.86
CTNNA1P35221 MTND1P9-201ENST00000453775 944 ntBASIC3.42□□□□□ -1.86
CTNNA1P35221 USP9YP10-201ENST00000454868 628 ntBASIC3.42□□□□□ -1.86
CTNNA1P35221 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.42□□□□□ -1.86
CTNNA1P35221 AL135752.1-201ENST00000479477 471 ntBASIC3.42□□□□□ -1.86
CTNNA1P35221 HMGB1P36-201ENST00000487709 576 ntBASIC3.42□□□□□ -1.86
CTNNA1P35221 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.42□□□□□ -1.86
CTNNA1P35221 AC093663.1-201ENST00000497190 394 ntBASIC3.42□□□□□ -1.86
CTNNA1P35221 AC021146.8-201ENST00000507455 733 ntBASIC3.42□□□□□ -1.86
CTNNA1P35221 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.42□□□□□ -1.86
CTNNA1P35221 AC010374.2-201ENST00000512933 535 ntBASIC3.42□□□□□ -1.86
CTNNA1P35221 RN7SKP282-201ENST00000516824 299 ntBASIC3.42□□□□□ -1.86
CTNNA1P35221 SNORA31.21-201ENST00000517180 77 ntBASIC3.42□□□□□ -1.86
CTNNA1P35221 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.42□□□□□ -1.86
CTNNA1P35221 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CTNNA1P35221 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.42□□□□□ -1.86
CTNNA1P35221 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.42□□□□□ -1.86
CTNNA1P35221 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.42□□□□□ -1.86
CTNNA1P35221 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.42□□□□□ -1.86
CTNNA1P35221 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.42□□□□□ -1.86
CTNNA1P35221 RPL23AP84-201ENST00000571193 464 ntBASIC3.42□□□□□ -1.86
CTNNA1P35221 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
CTNNA1P35221 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.42□□□□□ -1.86
CTNNA1P35221 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.42□□□□□ -1.86
CTNNA1P35221 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.42□□□□□ -1.86
CTNNA1P35221 AC079597.1-201ENST00000624306 508 ntBASIC3.42□□□□□ -1.86
CTNNA1P35221 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.42□□□□□ -1.86
CTNNA1P35221 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.42□□□□□ -1.86
CTNNA1P35221 AC092447.10-201ENST00000620607 1652 ntBASIC3.42□□□□□ -1.86
CTNNA1P35221 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
CTNNA1P35221 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.41□□□□□ -1.86
CTNNA1P35221 AL049641.1-201ENST00000441055 1948 ntBASIC3.41□□□□□ -1.86
CTNNA1P35221 AC007785.2-201ENST00000598627 1916 ntBASIC3.41□□□□□ -1.86
CTNNA1P35221 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CTNNA1P35221 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CTNNA1P35221 RNU6-289P-201ENST00000364093 107 ntBASIC3.41□□□□□ -1.86
CTNNA1P35221 RNU6-744P-201ENST00000365557 107 ntBASIC3.41□□□□□ -1.86
CTNNA1P35221 RNU6-1316P-201ENST00000384242 108 ntBASIC3.41□□□□□ -1.86
CTNNA1P35221 RNU6ATAC-201ENST00000408749 126 ntBASIC3.41□□□□□ -1.86
CTNNA1P35221 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.41□□□□□ -1.86
CTNNA1P35221 AL645937.1-202ENST00000421799 937 ntBASIC3.41□□□□□ -1.86
CTNNA1P35221 AC012498.1-201ENST00000424037 437 ntBASIC3.41□□□□□ -1.86
CTNNA1P35221 AC092648.1-201ENST00000425870 423 ntBASIC3.41□□□□□ -1.86
CTNNA1P35221 HSPD1P21-201ENST00000436541 245 ntBASIC3.41□□□□□ -1.86
CTNNA1P35221 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.41□□□□□ -1.86
CTNNA1P35221 AC112653.1-201ENST00000443851 386 ntBASIC3.41□□□□□ -1.86
CTNNA1P35221 PAXBP1P1-201ENST00000449315 447 ntBASIC3.41□□□□□ -1.86
CTNNA1P35221 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.41□□□□□ -1.86
CTNNA1P35221 RN7SL283P-201ENST00000489055 303 ntBASIC3.41□□□□□ -1.86
CTNNA1P35221 AC092185.1-201ENST00000491371 97 ntBASIC3.41□□□□□ -1.86
CTNNA1P35221 ARL4AP2-201ENST00000507378 601 ntBASIC3.41□□□□□ -1.86
CTNNA1P35221 PAICSP4-201ENST00000517543 1253 ntBASIC3.41□□□□□ -1.86
CTNNA1P35221 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.41□□□□□ -1.86
CTNNA1P35221 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.41□□□□□ -1.86
CTNNA1P35221 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.41□□□□□ -1.86
CTNNA1P35221 OR5B10P-201ENST00000532869 642 ntBASIC3.41□□□□□ -1.86
CTNNA1P35221 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.41□□□□□ -1.86
CTNNA1P35221 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.41□□□□□ -1.86
CTNNA1P35221 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.41□□□□□ -1.86
CTNNA1P35221 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.41□□□□□ -1.86
CTNNA1P35221 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.41□□□□□ -1.86
CTNNA1P35221 AC091057.3-201ENST00000602684 733 ntBASIC3.41□□□□□ -1.86
CTNNA1P35221 AC090186.1-201ENST00000605991 572 ntBASIC3.41□□□□□ -1.86
CTNNA1P35221 AC019176.2-201ENST00000611579 315 ntBASIC3.41□□□□□ -1.86
CTNNA1P35221 AC009268.2-201ENST00000621925 457 ntBASIC3.41□□□□□ -1.86
CTNNA1P35221 AC110079.1-202ENST00000635213 138 ntBASIC3.41□□□□□ -1.86
CTNNA1P35221 AC099654.7-201ENST00000635788 2127 ntBASIC3.41□□□□□ -1.86
CTNNA1P35221 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CTNNA1P35221 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CTNNA1P35221 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CTNNA1P35221 AC093908.1-201ENST00000623125 8092 ntBASIC3.4□□□□□ -1.86
CTNNA1P35221 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CTNNA1P35221 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms