Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 AL136133.1-201ENST00000413694 376 ntBASIC3.31□□□□□ -1.88
USP6P35125 AC114973.1-201ENST00000429057 632 ntBASIC3.31□□□□□ -1.88
USP6P35125 AC005345.1-201ENST00000431868 217 ntBASIC3.31□□□□□ -1.88
USP6P35125 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.31□□□□□ -1.88
USP6P35125 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
USP6P35125 AC012170.1-201ENST00000495139 359 ntBASIC3.31□□□□□ -1.88
USP6P35125 AC084024.2-201ENST00000503480 791 ntBASIC3.31□□□□□ -1.88
USP6P35125 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.31□□□□□ -1.88
USP6P35125 RN7SKP31-201ENST00000516354 278 ntBASIC3.31□□□□□ -1.88
USP6P35125 IGKV2D-36-201ENST00000518643 226 ntBASIC3.31□□□□□ -1.88
USP6P35125 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.31□□□□□ -1.88
USP6P35125 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.31□□□□□ -1.88
USP6P35125 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.31□□□□□ -1.88
USP6P35125 MIR1273D-201ENST00000577266 86 ntBASIC3.31□□□□□ -1.88
USP6P35125 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.31□□□□□ -1.88
USP6P35125 MIR5092-201ENST00000583139 88 ntBASIC3.31□□□□□ -1.88
USP6P35125 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.31□□□□□ -1.88
USP6P35125 AC012119.1-201ENST00000603184 222 ntBASIC3.31□□□□□ -1.88
USP6P35125 AL009028.1-201ENST00000604895 802 ntBASIC3.31□□□□□ -1.88
USP6P35125 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
USP6P35125 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.31□□□□□ -1.88
USP6P35125 AC123767.1-202ENST00000620407 817 ntBASIC3.31□□□□□ -1.88
USP6P35125 AL157770.1-201ENST00000623049 439 ntBASIC3.31□□□□□ -1.88
USP6P35125 AC109454.4-201ENST00000623411 649 ntBASIC3.31□□□□□ -1.88
USP6P35125 AC099654.9-201ENST00000637055 678 ntBASIC3.31□□□□□ -1.88
USP6P35125 AC099063.3-201ENST00000642066 185 ntBASIC3.31□□□□□ -1.88
USP6P35125 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
USP6P35125 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
USP6P35125 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.31□□□□□ -1.88
USP6P35125 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
USP6P35125 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
USP6P35125 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
USP6P35125 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
USP6P35125 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.3□□□□□ -1.88
USP6P35125 AP001486.2-201ENST00000561652 5113 ntBASIC3.3□□□□□ -1.88
USP6P35125 RNU6-251P-201ENST00000363235 104 ntBASIC3.3□□□□□ -1.88
USP6P35125 RNU6-921P-201ENST00000384361 107 ntBASIC3.3□□□□□ -1.88
USP6P35125 TMSB4XP8-201ENST00000402089 135 ntBASIC3.3□□□□□ -1.88
USP6P35125 AL121978.1-201ENST00000402778 359 ntBASIC3.3□□□□□ -1.88
USP6P35125 RNA5SP129-201ENST00000410276 118 ntBASIC3.3□□□□□ -1.88
USP6P35125 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.3□□□□□ -1.88
USP6P35125 TMSB4XP6-201ENST00000415187 135 ntBASIC3.3□□□□□ -1.88
USP6P35125 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
USP6P35125 TMSB4XP1-201ENST00000424567 135 ntBASIC3.3□□□□□ -1.88
USP6P35125 AC096632.1-201ENST00000427395 310 ntBASIC3.3□□□□□ -1.88
USP6P35125 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.3□□□□□ -1.88
USP6P35125 AL590103.1-201ENST00000434488 307 ntBASIC3.3□□□□□ -1.88
USP6P35125 MTCO1P53-201ENST00000441633 699 ntBASIC3.3□□□□□ -1.88
USP6P35125 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.3□□□□□ -1.88
USP6P35125 AC104164.3-201ENST00000467363 1258 ntBASIC3.3□□□□□ -1.88
USP6P35125 AP000926.1-201ENST00000479573 241 ntBASIC3.3□□□□□ -1.88
USP6P35125 RPL23AP44-201ENST00000482216 473 ntBASIC3.3□□□□□ -1.88
USP6P35125 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.3□□□□□ -1.88
USP6P35125 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.3□□□□□ -1.88
USP6P35125 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.3□□□□□ -1.88
USP6P35125 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.3□□□□□ -1.88
USP6P35125 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.3□□□□□ -1.88
USP6P35125 OR4G1P-201ENST00000588632 938 ntBASIC3.3□□□□□ -1.88
USP6P35125 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.3□□□□□ -1.88
USP6P35125 GAS5-AS1-201ENST00000602767 694 ntBASIC3.3□□□□□ -1.88
USP6P35125 AC083899.3-201ENST00000603413 594 ntBASIC3.3□□□□□ -1.88
USP6P35125 AC046143.2-201ENST00000609789 160 ntBASIC3.3□□□□□ -1.88
USP6P35125 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
USP6P35125 AC006213.4-201ENST00000616184 634 ntBASIC3.3□□□□□ -1.88
USP6P35125 AC121761.2-201ENST00000617300 689 ntBASIC3.3□□□□□ -1.88
USP6P35125 AC006065.5-201ENST00000623427 349 ntBASIC3.3□□□□□ -1.88
USP6P35125 AC025125.1-201ENST00000624743 1922 ntBASIC3.3□□□□□ -1.88
USP6P35125 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.3□□□□□ -1.88
USP6P35125 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
USP6P35125 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
USP6P35125 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
USP6P35125 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
USP6P35125 ZNF542P-204ENST00000482727 1305 ntBASIC3.3□□□□□ -1.88
USP6P35125 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
USP6P35125 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.3□□□□□ -1.88
USP6P35125 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
USP6P35125 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
USP6P35125 HMGB1P5-201ENST00000255320 642 ntBASIC3.29□□□□□ -1.88
USP6P35125 RNU6-1066P-201ENST00000363573 105 ntBASIC3.29□□□□□ -1.88
USP6P35125 RNU6-356P-201ENST00000384140 107 ntBASIC3.29□□□□□ -1.88
USP6P35125 RNA5SP239-201ENST00000410218 129 ntBASIC3.29□□□□□ -1.88
USP6P35125 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.29□□□□□ -1.88
USP6P35125 DPH3P2-201ENST00000422618 250 ntBASIC3.29□□□□□ -1.88
USP6P35125 AC005517.2-201ENST00000424673 553 ntBASIC3.29□□□□□ -1.88
USP6P35125 RAC1P8-201ENST00000427086 527 ntBASIC3.29□□□□□ -1.88
USP6P35125 CKS1BP5-201ENST00000434172 273 ntBASIC3.29□□□□□ -1.88
USP6P35125 AC244505.4-201ENST00000434905 287 ntBASIC3.29□□□□□ -1.88
USP6P35125 RPS12P2-201ENST00000439728 269 ntBASIC3.29□□□□□ -1.88
USP6P35125 AC093155.1-201ENST00000440164 826 ntBASIC3.29□□□□□ -1.88
USP6P35125 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.29□□□□□ -1.88
USP6P35125 SSXP5-201ENST00000443473 287 ntBASIC3.29□□□□□ -1.88
USP6P35125 RPL7P12-201ENST00000446719 750 ntBASIC3.29□□□□□ -1.88
USP6P35125 EXOSC3P1-201ENST00000448649 500 ntBASIC3.29□□□□□ -1.88
USP6P35125 AC146507.1-201ENST00000468335 354 ntBASIC3.29□□□□□ -1.88
USP6P35125 AC132942.1-201ENST00000486753 483 ntBASIC3.29□□□□□ -1.88
USP6P35125 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
USP6P35125 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.29□□□□□ -1.88
USP6P35125 AC093519.1-201ENST00000566109 298 ntBASIC3.29□□□□□ -1.88
USP6P35125 MIR3186-201ENST00000577404 85 ntBASIC3.29□□□□□ -1.88
USP6P35125 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms