Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AP001269.3-201ENST00000588718 329 ntBASIC3.72□□□□□ -1.81
HOXC13P31276 AL353778.1-201ENST00000603149 408 ntBASIC3.72□□□□□ -1.81
HOXC13P31276 AL133393.1-201ENST00000603277 287 ntBASIC3.72□□□□□ -1.81
HOXC13P31276 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXC13P31276 AL137843.1-201ENST00000605078 385 ntBASIC3.72□□□□□ -1.81
HOXC13P31276 AC004492.1-201ENST00000607036 742 ntBASIC3.72□□□□□ -1.81
HOXC13P31276 MIR7851-201ENST00000610611 160 ntBASIC3.72□□□□□ -1.81
HOXC13P31276 AL138880.2-201ENST00000616214 239 ntBASIC3.72□□□□□ -1.81
HOXC13P31276 AC004009.2-201ENST00000623016 728 ntBASIC3.72□□□□□ -1.81
HOXC13P31276 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.72□□□□□ -1.81
HOXC13P31276 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXC13P31276 AC090897.3-201ENST00000636973 1157 ntBASIC3.72□□□□□ -1.81
HOXC13P31276 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HOXC13P31276 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
HOXC13P31276 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.72□□□□□ -1.81
HOXC13P31276 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
HOXC13P31276 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
HOXC13P31276 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HOXC13P31276 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
HOXC13P31276 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HOXC13P31276 RNU4-35P-201ENST00000362588 141 ntBASIC3.71□□□□□ -1.82
HOXC13P31276 Y_RNA.465-201ENST00000384293 102 ntBASIC3.71□□□□□ -1.82
HOXC13P31276 RNU6-192P-201ENST00000391253 100 ntBASIC3.71□□□□□ -1.82
HOXC13P31276 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.71□□□□□ -1.82
HOXC13P31276 U3.39-201ENST00000408569 239 ntBASIC3.71□□□□□ -1.82
HOXC13P31276 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.71□□□□□ -1.82
HOXC13P31276 MTCO1P21-201ENST00000416634 589 ntBASIC3.71□□□□□ -1.82
HOXC13P31276 BX842559.1-201ENST00000419615 532 ntBASIC3.71□□□□□ -1.82
HOXC13P31276 SEPT2P1-201ENST00000419651 180 ntBASIC3.71□□□□□ -1.82
HOXC13P31276 TRIAP1P1-201ENST00000427062 225 ntBASIC3.71□□□□□ -1.82
HOXC13P31276 AL353706.1-201ENST00000436728 494 ntBASIC3.71□□□□□ -1.82
HOXC13P31276 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
HOXC13P31276 MTND2P4-201ENST00000445034 1004 ntBASIC3.71□□□□□ -1.82
HOXC13P31276 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.71□□□□□ -1.82
HOXC13P31276 AC104308.1-201ENST00000454621 333 ntBASIC3.71□□□□□ -1.82
HOXC13P31276 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.71□□□□□ -1.82
HOXC13P31276 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.71□□□□□ -1.82
HOXC13P31276 MTCYBP17-201ENST00000503579 789 ntBASIC3.71□□□□□ -1.82
HOXC13P31276 COX7A2P2-201ENST00000505291 250 ntBASIC3.71□□□□□ -1.82
HOXC13P31276 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.71□□□□□ -1.82
HOXC13P31276 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.71□□□□□ -1.82
HOXC13P31276 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.71□□□□□ -1.82
HOXC13P31276 AP000926.4-201ENST00000527351 454 ntBASIC3.71□□□□□ -1.82
HOXC13P31276 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.71□□□□□ -1.82
HOXC13P31276 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.71□□□□□ -1.82
HOXC13P31276 RPL21P12-201ENST00000559810 515 ntBASIC3.71□□□□□ -1.82
HOXC13P31276 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.71□□□□□ -1.82
HOXC13P31276 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.71□□□□□ -1.82
HOXC13P31276 NBR2-204ENST00000587322 63 ntBASIC3.71□□□□□ -1.82
HOXC13P31276 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.71□□□□□ -1.82
HOXC13P31276 AL355073.2-201ENST00000612106 557 ntBASIC3.71□□□□□ -1.82
HOXC13P31276 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.71□□□□□ -1.82
HOXC13P31276 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.71□□□□□ -1.82
HOXC13P31276 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HOXC13P31276 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.71□□□□□ -1.82
HOXC13P31276 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HOXC13P31276 AL079343.1-201ENST00000572358 1771 ntBASIC3.71□□□□□ -1.82
HOXC13P31276 AC099786.3-201ENST00000565735 1410 ntBASIC3.7□□□□□ -1.82
HOXC13P31276 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.7□□□□□ -1.82
HOXC13P31276 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.7□□□□□ -1.82
HOXC13P31276 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
HOXC13P31276 RNU1-33P-201ENST00000364249 162 ntBASIC3.7□□□□□ -1.82
HOXC13P31276 MIR513B-201ENST00000385136 84 ntBASIC3.7□□□□□ -1.82
HOXC13P31276 AL136372.1-201ENST00000403060 228 ntBASIC3.7□□□□□ -1.82
HOXC13P31276 BTF3L4P1-201ENST00000413813 468 ntBASIC3.7□□□□□ -1.82
HOXC13P31276 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.7□□□□□ -1.82
HOXC13P31276 RPL22P18-201ENST00000417197 377 ntBASIC3.7□□□□□ -1.82
HOXC13P31276 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.7□□□□□ -1.82
HOXC13P31276 HSPE1P1-201ENST00000421494 318 ntBASIC3.7□□□□□ -1.82
HOXC13P31276 UBE2D3P2-201ENST00000424409 445 ntBASIC3.7□□□□□ -1.82
HOXC13P31276 AC006989.1-201ENST00000427212 131 ntBASIC3.7□□□□□ -1.82
HOXC13P31276 ATP5F1P1-201ENST00000433775 569 ntBASIC3.7□□□□□ -1.82
HOXC13P31276 AL591503.2-201ENST00000442314 1005 ntBASIC3.7□□□□□ -1.82
HOXC13P31276 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.7□□□□□ -1.82
HOXC13P31276 AC005297.2-201ENST00000450430 606 ntBASIC3.7□□□□□ -1.82
HOXC13P31276 RPL12P26-201ENST00000452430 487 ntBASIC3.7□□□□□ -1.82
HOXC13P31276 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.7□□□□□ -1.82
HOXC13P31276 TRGVB-201ENST00000453257 471 ntBASIC3.7□□□□□ -1.82
HOXC13P31276 RPL18AP17-201ENST00000455326 198 ntBASIC3.7□□□□□ -1.82
HOXC13P31276 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.7□□□□□ -1.82
HOXC13P31276 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HOXC13P31276 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.7□□□□□ -1.82
HOXC13P31276 TMEM251P1-201ENST00000503717 318 ntBASIC3.7□□□□□ -1.82
HOXC13P31276 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.7□□□□□ -1.82
HOXC13P31276 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.7□□□□□ -1.82
HOXC13P31276 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.7□□□□□ -1.82
HOXC13P31276 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.7□□□□□ -1.82
HOXC13P31276 AC022861.1-201ENST00000522981 663 ntBASIC3.7□□□□□ -1.82
HOXC13P31276 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.7□□□□□ -1.82
HOXC13P31276 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.7□□□□□ -1.82
HOXC13P31276 AL121576.1-201ENST00000556055 276 ntBASIC3.7□□□□□ -1.82
HOXC13P31276 NCAPGP2-201ENST00000557911 754 ntBASIC3.7□□□□□ -1.82
HOXC13P31276 MED28P6-201ENST00000558776 231 ntBASIC3.7□□□□□ -1.82
HOXC13P31276 AC090888.1-201ENST00000561335 1141 ntBASIC3.7□□□□□ -1.82
HOXC13P31276 AC023813.2-201ENST00000564321 469 ntBASIC3.7□□□□□ -1.82
HOXC13P31276 AC055876.1-202ENST00000567053 138 ntBASIC3.7□□□□□ -1.82
HOXC13P31276 AL031176.1-201ENST00000604554 466 ntBASIC3.7□□□□□ -1.82
HOXC13P31276 AC106791.2-201ENST00000604680 391 ntBASIC3.7□□□□□ -1.82
HOXC13P31276 AC012443.1-201ENST00000605605 231 ntBASIC3.7□□□□□ -1.82
HOXC13P31276 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 154.9 ms