Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC007283.2-201ENST00000424739 197 ntBASIC5.72□□□□□ -1.49
RXRBP28702 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.72□□□□□ -1.49
RXRBP28702 AL591212.2-201ENST00000433923 257 ntBASIC5.72□□□□□ -1.49
RXRBP28702 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC5.72□□□□□ -1.49
RXRBP28702 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.72□□□□□ -1.49
RXRBP28702 Z98949.2-201ENST00000440996 144 ntBASIC5.72□□□□□ -1.49
RXRBP28702 HSPE1P28-201ENST00000443139 211 ntBASIC5.72□□□□□ -1.49
RXRBP28702 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC5.72□□□□□ -1.49
RXRBP28702 AL137792.2-201ENST00000443484 235 ntBASIC5.72□□□□□ -1.49
RXRBP28702 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC5.72□□□□□ -1.49
RXRBP28702 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC5.72□□□□□ -1.49
RXRBP28702 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC5.72□□□□□ -1.49
RXRBP28702 UBA52P3-201ENST00000491303 382 ntBASIC5.72□□□□□ -1.49
RXRBP28702 AC110792.1-201ENST00000491826 472 ntBASIC5.72□□□□□ -1.49
RXRBP28702 AC017037.2-201ENST00000513850 890 ntBASIC5.72□□□□□ -1.49
RXRBP28702 MTCO2P24-201ENST00000515611 426 ntBASIC5.72□□□□□ -1.49
RXRBP28702 RNA5SP497-201ENST00000516081 97 ntBASIC5.72□□□□□ -1.49
RXRBP28702 RN7SKP283-201ENST00000517197 270 ntBASIC5.72□□□□□ -1.49
RXRBP28702 COX6CP8-201ENST00000522620 226 ntBASIC5.72□□□□□ -1.49
RXRBP28702 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC5.72□□□□□ -1.49
RXRBP28702 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC5.72□□□□□ -1.49
RXRBP28702 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC5.72□□□□□ -1.49
RXRBP28702 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.72□□□□□ -1.49
RXRBP28702 CTHRC1P1-201ENST00000605383 469 ntBASIC5.72□□□□□ -1.49
RXRBP28702 RNU6-89P-201ENST00000606519 100 ntBASIC5.72□□□□□ -1.49
RXRBP28702 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.72□□□□□ -1.49
RXRBP28702 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RXRBP28702 MIR3651-201ENST00000630427 90 ntBASIC5.72□□□□□ -1.49
RXRBP28702 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.72□□□□□ -1.49
RXRBP28702 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.72□□□□□ -1.49
RXRBP28702 AL049780.3-201ENST00000624612 1583 ntBASIC5.72□□□□□ -1.49
RXRBP28702 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
RXRBP28702 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
RXRBP28702 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RXRBP28702 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RXRBP28702 AP001350.1-201ENST00000601906 1524 ntBASIC5.71□□□□□ -1.5
RXRBP28702 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC5.71□□□□□ -1.5
RXRBP28702 RNU6-1097P-201ENST00000363586 107 ntBASIC5.71□□□□□ -1.5
RXRBP28702 Y_RNA.301-201ENST00000364990 103 ntBASIC5.71□□□□□ -1.5
RXRBP28702 Y_RNA.339-201ENST00000365325 102 ntBASIC5.71□□□□□ -1.5
RXRBP28702 RNU4-20P-201ENST00000365601 151 ntBASIC5.71□□□□□ -1.5
RXRBP28702 RNU6-213P-201ENST00000384051 104 ntBASIC5.71□□□□□ -1.5
RXRBP28702 MIR514A2-201ENST00000385131 88 ntBASIC5.71□□□□□ -1.5
RXRBP28702 MIR514A3-201ENST00000385132 88 ntBASIC5.71□□□□□ -1.5
RXRBP28702 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
RXRBP28702 CTSL3P-202ENST00000412179 788 ntBASIC5.71□□□□□ -1.5
RXRBP28702 TPMTP2-201ENST00000414372 726 ntBASIC5.71□□□□□ -1.5
RXRBP28702 SYF2P2-201ENST00000417620 583 ntBASIC5.71□□□□□ -1.5
RXRBP28702 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.71□□□□□ -1.5
RXRBP28702 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC5.71□□□□□ -1.5
RXRBP28702 AC114495.1-201ENST00000441274 436 ntBASIC5.71□□□□□ -1.5
RXRBP28702 AC104651.2-201ENST00000447549 528 ntBASIC5.71□□□□□ -1.5
RXRBP28702 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.71□□□□□ -1.5
RXRBP28702 RNU7-63P-201ENST00000459054 62 ntBASIC5.71□□□□□ -1.5
RXRBP28702 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.71□□□□□ -1.5
RXRBP28702 RPS26P28-201ENST00000470806 348 ntBASIC5.71□□□□□ -1.5
RXRBP28702 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.71□□□□□ -1.5
RXRBP28702 RN7SL293P-201ENST00000481765 281 ntBASIC5.71□□□□□ -1.5
RXRBP28702 RN7SL812P-201ENST00000493791 279 ntBASIC5.71□□□□□ -1.5
RXRBP28702 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC5.71□□□□□ -1.5
RXRBP28702 RNU6-714P-201ENST00000516963 103 ntBASIC5.71□□□□□ -1.5
RXRBP28702 NARSP2-201ENST00000518524 679 ntBASIC5.71□□□□□ -1.5
RXRBP28702 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC5.71□□□□□ -1.5
RXRBP28702 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC5.71□□□□□ -1.5
RXRBP28702 AC107934.1-201ENST00000522215 217 ntBASIC5.71□□□□□ -1.5
RXRBP28702 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC5.71□□□□□ -1.5
RXRBP28702 AP003122.3-201ENST00000526316 255 ntBASIC5.71□□□□□ -1.5
RXRBP28702 ZNF705CP-201ENST00000530515 889 ntBASIC5.71□□□□□ -1.5
RXRBP28702 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.71□□□□□ -1.5
RXRBP28702 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC5.71□□□□□ -1.5
RXRBP28702 SNRPGP18-201ENST00000553000 214 ntBASIC5.71□□□□□ -1.5
RXRBP28702 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC5.71□□□□□ -1.5
RXRBP28702 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC5.71□□□□□ -1.5
RXRBP28702 AC007938.3-201ENST00000604965 623 ntBASIC5.71□□□□□ -1.5
RXRBP28702 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.71□□□□□ -1.5
RXRBP28702 AC009318.4-201ENST00000620496 486 ntBASIC5.71□□□□□ -1.5
RXRBP28702 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC5.71□□□□□ -1.5
RXRBP28702 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RXRBP28702 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
RXRBP28702 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC5.71□□□□□ -1.5
RXRBP28702 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
RXRBP28702 AC092447.10-201ENST00000620607 1652 ntBASIC5.71□□□□□ -1.5
RXRBP28702 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
RXRBP28702 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
RXRBP28702 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.71□□□□□ -1.5
RXRBP28702 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RXRBP28702 USP9YP4-201ENST00000424401 1745 ntBASIC5.71□□□□□ -1.5
RXRBP28702 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.71□□□□□ -1.5
RXRBP28702 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RXRBP28702 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.7□□□□□ -1.5
RXRBP28702 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
RXRBP28702 AC025125.1-201ENST00000624743 1922 ntBASIC5.7□□□□□ -1.5
RXRBP28702 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
RXRBP28702 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
RXRBP28702 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RXRBP28702 AC067945.1-201ENST00000342609 618 ntBASIC5.7□□□□□ -1.5
RXRBP28702 Y_RNA.28-201ENST00000362554 111 ntBASIC5.7□□□□□ -1.5
RXRBP28702 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RXRBP28702 RPS29P4-201ENST00000414733 161 ntBASIC5.7□□□□□ -1.5
RXRBP28702 AC233981.1-201ENST00000423224 461 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms