Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.5□□□□□ -1.53
LMNB1P20700 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
LMNB1P20700 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LMNB1P20700 Y_RNA.231-201ENST00000364358 102 ntBASIC5.5□□□□□ -1.53
LMNB1P20700 RNU6-146P-201ENST00000384602 108 ntBASIC5.5□□□□□ -1.53
LMNB1P20700 MIR558-201ENST00000384920 94 ntBASIC5.5□□□□□ -1.53
LMNB1P20700 MIR449B-201ENST00000384995 97 ntBASIC5.5□□□□□ -1.53
LMNB1P20700 TXNP7-201ENST00000406296 293 ntBASIC5.5□□□□□ -1.53
LMNB1P20700 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.5□□□□□ -1.53
LMNB1P20700 OR1AA1P-201ENST00000419597 916 ntBASIC5.5□□□□□ -1.53
LMNB1P20700 HMGB1P18-201ENST00000438801 619 ntBASIC5.5□□□□□ -1.53
LMNB1P20700 AL121877.1-201ENST00000453704 622 ntBASIC5.5□□□□□ -1.53
LMNB1P20700 SNORD121B-201ENST00000458838 81 ntBASIC5.5□□□□□ -1.53
LMNB1P20700 snoU13.24-201ENST00000458998 104 ntBASIC5.5□□□□□ -1.53
LMNB1P20700 Y_RNA.632-201ENST00000459189 102 ntBASIC5.5□□□□□ -1.53
LMNB1P20700 RNU6-329P-201ENST00000459618 107 ntBASIC5.5□□□□□ -1.53
LMNB1P20700 AL139099.1-201ENST00000497398 403 ntBASIC5.5□□□□□ -1.53
LMNB1P20700 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC5.5□□□□□ -1.53
LMNB1P20700 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.5□□□□□ -1.53
LMNB1P20700 SNORA19.2-201ENST00000516013 114 ntBASIC5.5□□□□□ -1.53
LMNB1P20700 RN7SKP219-201ENST00000516825 296 ntBASIC5.5□□□□□ -1.53
LMNB1P20700 AP005639.2-201ENST00000527592 928 ntBASIC5.5□□□□□ -1.53
LMNB1P20700 FKBP1BP1-201ENST00000553366 325 ntBASIC5.5□□□□□ -1.53
LMNB1P20700 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.5□□□□□ -1.53
LMNB1P20700 RN7SL600P-201ENST00000581811 299 ntBASIC5.5□□□□□ -1.53
LMNB1P20700 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC5.5□□□□□ -1.53
LMNB1P20700 RPL7P50-201ENST00000600588 727 ntBASIC5.5□□□□□ -1.53
LMNB1P20700 AC010591.1-201ENST00000603941 649 ntBASIC5.5□□□□□ -1.53
LMNB1P20700 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC5.5□□□□□ -1.53
LMNB1P20700 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.5□□□□□ -1.53
LMNB1P20700 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.5□□□□□ -1.53
LMNB1P20700 AC002550.2-201ENST00000621246 394 ntBASIC5.5□□□□□ -1.53
LMNB1P20700 AL133216.2-202ENST00000634512 349 ntBASIC5.5□□□□□ -1.53
LMNB1P20700 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
LMNB1P20700 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
LMNB1P20700 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.5□□□□□ -1.53
LMNB1P20700 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
LMNB1P20700 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.5□□□□□ -1.53
LMNB1P20700 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LMNB1P20700 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
LMNB1P20700 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC5.49□□□□□ -1.53
LMNB1P20700 SAGE4P-201ENST00000442271 3381 ntBASIC5.49□□□□□ -1.53
LMNB1P20700 SMG1P4-204ENST00000523028 4131 ntBASIC5.49□□□□□ -1.53
LMNB1P20700 AL158163.1-201ENST00000603915 1649 ntBASIC5.49□□□□□ -1.53
LMNB1P20700 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
LMNB1P20700 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
LMNB1P20700 AC067945.1-201ENST00000342609 618 ntBASIC5.49□□□□□ -1.53
LMNB1P20700 MIR331-201ENST00000362302 94 ntBASIC5.49□□□□□ -1.53
LMNB1P20700 SNORA63.1-201ENST00000362493 131 ntBASIC5.49□□□□□ -1.53
LMNB1P20700 RNU6-510P-201ENST00000391239 108 ntBASIC5.49□□□□□ -1.53
LMNB1P20700 BX323014.1-201ENST00000412876 237 ntBASIC5.49□□□□□ -1.53
LMNB1P20700 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC5.49□□□□□ -1.53
LMNB1P20700 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC5.49□□□□□ -1.53
LMNB1P20700 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.49□□□□□ -1.53
LMNB1P20700 RPL12P46-201ENST00000436610 195 ntBASIC5.49□□□□□ -1.53
LMNB1P20700 AC006480.1-201ENST00000449887 378 ntBASIC5.49□□□□□ -1.53
LMNB1P20700 RPS29P15-201ENST00000458329 171 ntBASIC5.49□□□□□ -1.53
LMNB1P20700 RPS27AP13-201ENST00000498403 237 ntBASIC5.49□□□□□ -1.53
LMNB1P20700 AC092436.1-201ENST00000506450 503 ntBASIC5.49□□□□□ -1.53
LMNB1P20700 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC5.49□□□□□ -1.53
LMNB1P20700 MTCO3P44-201ENST00000510977 541 ntBASIC5.49□□□□□ -1.53
LMNB1P20700 AC008958.1-201ENST00000511047 682 ntBASIC5.49□□□□□ -1.53
LMNB1P20700 AC026726.1-201ENST00000512859 601 ntBASIC5.49□□□□□ -1.53
LMNB1P20700 RN7SKP13-201ENST00000515933 244 ntBASIC5.49□□□□□ -1.53
LMNB1P20700 Y_RNA.665-201ENST00000516177 98 ntBASIC5.49□□□□□ -1.53
LMNB1P20700 Y_RNA.691-201ENST00000516611 103 ntBASIC5.49□□□□□ -1.53
LMNB1P20700 AF186190.1-201ENST00000517470 480 ntBASIC5.49□□□□□ -1.53
LMNB1P20700 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.49□□□□□ -1.53
LMNB1P20700 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.49□□□□□ -1.53
LMNB1P20700 PSMA3P-201ENST00000555485 635 ntBASIC5.49□□□□□ -1.53
LMNB1P20700 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.49□□□□□ -1.53
LMNB1P20700 AC026464.5-201ENST00000562497 722 ntBASIC5.49□□□□□ -1.53
LMNB1P20700 AC020634.1-201ENST00000608701 549 ntBASIC5.49□□□□□ -1.53
LMNB1P20700 AL031666.3-201ENST00000609320 1006 ntBASIC5.49□□□□□ -1.53
LMNB1P20700 AC069200.1-201ENST00000609511 323 ntBASIC5.49□□□□□ -1.53
LMNB1P20700 ATM-228ENST00000639240 498 ntTSL 5 BASIC5.49□□□□□ -1.53
LMNB1P20700 ATM-230ENST00000640388 578 ntTSL 5 BASIC5.49□□□□□ -1.53
LMNB1P20700 AC004972.1-201ENST00000623934 2209 ntBASIC5.49□□□□□ -1.53
LMNB1P20700 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
LMNB1P20700 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.49□□□□□ -1.53
LMNB1P20700 Z95327.2-201ENST00000414579 1873 ntBASIC5.49□□□□□ -1.53
LMNB1P20700 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
LMNB1P20700 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
LMNB1P20700 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
LMNB1P20700 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
LMNB1P20700 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.48□□□□□ -1.53
LMNB1P20700 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LMNB1P20700 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
LMNB1P20700 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
LMNB1P20700 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.48□□□□□ -1.53
LMNB1P20700 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LMNB1P20700 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.48□□□□□ -1.53
LMNB1P20700 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
LMNB1P20700 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
LMNB1P20700 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
LMNB1P20700 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LMNB1P20700 RNU6-511P-201ENST00000363496 107 ntBASIC5.48□□□□□ -1.53
LMNB1P20700 AC019155.1-201ENST00000382242 574 ntBASIC5.48□□□□□ -1.53
LMNB1P20700 RNU6-831P-201ENST00000384548 107 ntBASIC5.48□□□□□ -1.53
LMNB1P20700 MIR454-201ENST00000390180 115 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms