Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
XRCC1P18887 RNU6-621P-201ENST00000364752 109 ntBASIC3.02□□□□□ -1.93
XRCC1P18887 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.02□□□□□ -1.93
XRCC1P18887 Y_RNA.465-201ENST00000384293 102 ntBASIC3.02□□□□□ -1.93
XRCC1P18887 RPL7P25-201ENST00000404151 721 ntBASIC3.02□□□□□ -1.93
XRCC1P18887 NDUFB4P4-201ENST00000404822 243 ntBASIC3.02□□□□□ -1.93
XRCC1P18887 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
XRCC1P18887 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.02□□□□□ -1.93
XRCC1P18887 NANOGP5-201ENST00000424456 877 ntBASIC3.02□□□□□ -1.93
XRCC1P18887 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
XRCC1P18887 AC092648.1-201ENST00000425870 423 ntBASIC3.02□□□□□ -1.93
XRCC1P18887 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.02□□□□□ -1.93
XRCC1P18887 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
XRCC1P18887 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.02□□□□□ -1.93
XRCC1P18887 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.02□□□□□ -1.93
XRCC1P18887 AL121871.1-201ENST00000443413 436 ntBASIC3.02□□□□□ -1.93
XRCC1P18887 AC016696.1-201ENST00000446949 318 ntBASIC3.02□□□□□ -1.93
XRCC1P18887 ARPC3P5-201ENST00000448802 534 ntBASIC3.02□□□□□ -1.93
XRCC1P18887 Z82190.1-201ENST00000454534 490 ntBASIC3.02□□□□□ -1.93
XRCC1P18887 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.02□□□□□ -1.93
XRCC1P18887 AP004217.1-201ENST00000480579 346 ntBASIC3.02□□□□□ -1.93
XRCC1P18887 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.02□□□□□ -1.93
XRCC1P18887 AC079395.1-201ENST00000510981 262 ntBASIC3.02□□□□□ -1.93
XRCC1P18887 RN7SKP43-201ENST00000516173 320 ntBASIC3.02□□□□□ -1.93
XRCC1P18887 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.02□□□□□ -1.93
XRCC1P18887 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.02□□□□□ -1.93
XRCC1P18887 AC090695.1-201ENST00000561269 1222 ntBASIC3.02□□□□□ -1.93
XRCC1P18887 MTND1P8-201ENST00000571424 950 ntBASIC3.02□□□□□ -1.93
XRCC1P18887 AC009220.3-201ENST00000604318 586 ntBASIC3.02□□□□□ -1.93
XRCC1P18887 AC016597.2-201ENST00000613256 341 ntBASIC3.02□□□□□ -1.93
XRCC1P18887 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC3.02□□□□□ -1.93
XRCC1P18887 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
XRCC1P18887 AC106754.1-201ENST00000562632 1513 ntBASIC3.02□□□□□ -1.93
XRCC1P18887 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
XRCC1P18887 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
XRCC1P18887 API5P2-201ENST00000397055 1498 ntBASIC3.02□□□□□ -1.93
XRCC1P18887 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.02□□□□□ -1.93
XRCC1P18887 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.01□□□□□ -1.93
XRCC1P18887 AC103988.1-201ENST00000566382 2177 ntBASIC3.01□□□□□ -1.93
XRCC1P18887 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.01□□□□□ -1.93
XRCC1P18887 GNG5P1-201ENST00000255500 204 ntBASIC3.01□□□□□ -1.93
XRCC1P18887 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
XRCC1P18887 RNU6-1155P-201ENST00000363554 107 ntBASIC3.01□□□□□ -1.93
XRCC1P18887 SNORA71.1-201ENST00000364523 117 ntBASIC3.01□□□□□ -1.93
XRCC1P18887 RNU1-140P-201ENST00000365040 165 ntBASIC3.01□□□□□ -1.93
XRCC1P18887 Y_RNA.408-201ENST00000383987 102 ntBASIC3.01□□□□□ -1.93
XRCC1P18887 UBA52P6-201ENST00000399822 382 ntBASIC3.01□□□□□ -1.93
XRCC1P18887 AL356131.1-201ENST00000405826 414 ntBASIC3.01□□□□□ -1.93
XRCC1P18887 BMS1P22-201ENST00000414726 313 ntBASIC3.01□□□□□ -1.93
XRCC1P18887 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.01□□□□□ -1.93
XRCC1P18887 AC007742.1-201ENST00000425789 329 ntBASIC3.01□□□□□ -1.93
XRCC1P18887 ELOCP26-201ENST00000436067 329 ntBASIC3.01□□□□□ -1.93
XRCC1P18887 RSL24D1P3-201ENST00000449255 495 ntBASIC3.01□□□□□ -1.93
XRCC1P18887 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.01□□□□□ -1.93
XRCC1P18887 AC005297.2-201ENST00000450430 606 ntBASIC3.01□□□□□ -1.93
XRCC1P18887 SSXP4-201ENST00000451349 245 ntBASIC3.01□□□□□ -1.93
XRCC1P18887 AC092155.2-201ENST00000454675 477 ntBASIC3.01□□□□□ -1.93
XRCC1P18887 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.01□□□□□ -1.93
XRCC1P18887 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.01□□□□□ -1.93
XRCC1P18887 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.01□□□□□ -1.93
XRCC1P18887 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.01□□□□□ -1.93
XRCC1P18887 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.01□□□□□ -1.93
XRCC1P18887 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.01□□□□□ -1.93
XRCC1P18887 XKRY-201ENST00000510392 1100 ntBASIC3.01□□□□□ -1.93
XRCC1P18887 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.01□□□□□ -1.93
XRCC1P18887 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.01□□□□□ -1.93
XRCC1P18887 SNRPGP16-201ENST00000533275 226 ntBASIC3.01□□□□□ -1.93
XRCC1P18887 FAM60BP-201ENST00000578364 658 ntBASIC3.01□□□□□ -1.93
XRCC1P18887 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.01□□□□□ -1.93
XRCC1P18887 AC011471.1-201ENST00000585766 187 ntBASIC3.01□□□□□ -1.93
XRCC1P18887 VN1R78P-201ENST00000597393 564 ntBASIC3.01□□□□□ -1.93
XRCC1P18887 DUXAP3-201ENST00000603616 594 ntBASIC3.01□□□□□ -1.93
XRCC1P18887 AL031176.1-201ENST00000604554 466 ntBASIC3.01□□□□□ -1.93
XRCC1P18887 AC024933.1-201ENST00000608472 348 ntBASIC3.01□□□□□ -1.93
XRCC1P18887 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.01□□□□□ -1.93
XRCC1P18887 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.01□□□□□ -1.93
XRCC1P18887 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
XRCC1P18887 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.01□□□□□ -1.93
XRCC1P18887 AC022960.3-201ENST00000619794 441 ntBASIC3.01□□□□□ -1.93
XRCC1P18887 AC090897.3-201ENST00000636973 1157 ntBASIC3.01□□□□□ -1.93
XRCC1P18887 CRYM-AS1-204ENST00000637983 556 ntBASIC3.01□□□□□ -1.93
XRCC1P18887 MTND5P7-201ENST00000413558 1798 ntBASIC3.01□□□□□ -1.93
XRCC1P18887 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.01□□□□□ -1.93
XRCC1P18887 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.01□□□□□ -1.93
XRCC1P18887 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
XRCC1P18887 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
XRCC1P18887 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
XRCC1P18887 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
XRCC1P18887 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
XRCC1P18887 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3□□□□□ -1.93
XRCC1P18887 OR5H2-201ENST00000355273 945 ntBASIC3□□□□□ -1.93
XRCC1P18887 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3□□□□□ -1.93
XRCC1P18887 RNU6-173P-201ENST00000364215 104 ntBASIC3□□□□□ -1.93
XRCC1P18887 Y_RNA.311-201ENST00000365068 96 ntBASIC3□□□□□ -1.93
XRCC1P18887 MIR181B1-201ENST00000385240 110 ntBASIC3□□□□□ -1.93
XRCC1P18887 AC110754.1-201ENST00000399740 601 ntBASIC3□□□□□ -1.93
XRCC1P18887 AL354719.1-201ENST00000406535 843 ntBASIC3□□□□□ -1.93
XRCC1P18887 RNU6-584P-201ENST00000410350 95 ntBASIC3□□□□□ -1.93
XRCC1P18887 AL592310.1-201ENST00000414330 671 ntBASIC3□□□□□ -1.93
XRCC1P18887 RPL21P32-201ENST00000419877 477 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms