Protein–RNA interactions for Protein: P18827

SDC1, Syndecan-1, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1P18827 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC2.92□□□□□ -1.94
SDC1P18827 NDUFB4P5-201ENST00000415445 361 ntBASIC2.92□□□□□ -1.94
SDC1P18827 TRIAP1P1-201ENST00000427062 225 ntBASIC2.92□□□□□ -1.94
SDC1P18827 AC005326.1-201ENST00000429197 123 ntBASIC2.92□□□□□ -1.94
SDC1P18827 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.92□□□□□ -1.94
SDC1P18827 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.92□□□□□ -1.94
SDC1P18827 AC009969.1-201ENST00000438726 172 ntBASIC2.92□□□□□ -1.94
SDC1P18827 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.92□□□□□ -1.94
SDC1P18827 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.92□□□□□ -1.94
SDC1P18827 AC016696.1-201ENST00000446949 318 ntBASIC2.92□□□□□ -1.94
SDC1P18827 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.92□□□□□ -1.94
SDC1P18827 HMGB1P36-201ENST00000487709 576 ntBASIC2.92□□□□□ -1.94
SDC1P18827 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
SDC1P18827 AC108043.1-201ENST00000512696 574 ntBASIC2.92□□□□□ -1.94
SDC1P18827 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.92□□□□□ -1.94
SDC1P18827 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SDC1P18827 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.92□□□□□ -1.94
SDC1P18827 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.92□□□□□ -1.94
SDC1P18827 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.92□□□□□ -1.94
SDC1P18827 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.92□□□□□ -1.94
SDC1P18827 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.92□□□□□ -1.94
SDC1P18827 AC009097.3-201ENST00000563557 1018 ntBASIC2.92□□□□□ -1.94
SDC1P18827 AC090615.1-201ENST00000577519 154 ntBASIC2.92□□□□□ -1.94
SDC1P18827 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.92□□□□□ -1.94
SDC1P18827 UBL5P2-201ENST00000583788 219 ntBASIC2.92□□□□□ -1.94
SDC1P18827 SNORD84-203ENST00000584275 78 ntBASIC2.92□□□□□ -1.94
SDC1P18827 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.92□□□□□ -1.94
SDC1P18827 AC004987.4-201ENST00000603383 338 ntBASIC2.92□□□□□ -1.94
SDC1P18827 AL031176.1-201ENST00000604554 466 ntBASIC2.92□□□□□ -1.94
SDC1P18827 AC079395.3-201ENST00000615161 484 ntBASIC2.92□□□□□ -1.94
SDC1P18827 AL136981.2-201ENST00000617319 734 ntBASIC2.92□□□□□ -1.94
SDC1P18827 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SDC1P18827 MIR7975-201ENST00000619350 68 ntBASIC2.92□□□□□ -1.94
SDC1P18827 AC099506.2-201ENST00000623074 221 ntBASIC2.92□□□□□ -1.94
SDC1P18827 AC018692.3-201ENST00000623929 123 ntBASIC2.92□□□□□ -1.94
SDC1P18827 AC079228.1-201ENST00000624774 1049 ntBASIC2.92□□□□□ -1.94
SDC1P18827 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.92□□□□□ -1.94
SDC1P18827 MAPK10-362ENST00000641864 4484 ntBASIC2.91□□□□□ -1.94
SDC1P18827 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.91□□□□□ -1.94
SDC1P18827 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
SDC1P18827 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
SDC1P18827 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
SDC1P18827 RNU6-289P-201ENST00000364093 107 ntBASIC2.91□□□□□ -1.94
SDC1P18827 DYNLT3P1-201ENST00000378574 347 ntBASIC2.91□□□□□ -1.94
SDC1P18827 SNORD15B-201ENST00000384714 146 ntBASIC2.91□□□□□ -1.94
SDC1P18827 RPL7P25-201ENST00000404151 721 ntBASIC2.91□□□□□ -1.94
SDC1P18827 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SDC1P18827 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.91□□□□□ -1.94
SDC1P18827 YPEL5P1-201ENST00000419731 367 ntBASIC2.91□□□□□ -1.94
SDC1P18827 MTCO2P21-201ENST00000419780 677 ntBASIC2.91□□□□□ -1.94
SDC1P18827 XKRYP1-201ENST00000423438 492 ntBASIC2.91□□□□□ -1.94
SDC1P18827 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.91□□□□□ -1.94
SDC1P18827 XKRYP2-201ENST00000432915 492 ntBASIC2.91□□□□□ -1.94
SDC1P18827 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.91□□□□□ -1.94
SDC1P18827 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.91□□□□□ -1.94
SDC1P18827 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SDC1P18827 ANKRD26P4-201ENST00000455755 950 ntBASIC2.91□□□□□ -1.94
SDC1P18827 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.91□□□□□ -1.94
SDC1P18827 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.91□□□□□ -1.94
SDC1P18827 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.91□□□□□ -1.94
SDC1P18827 AC118282.1-201ENST00000506408 765 ntBASIC2.91□□□□□ -1.94
SDC1P18827 MLLT10P2-201ENST00000506434 249 ntBASIC2.91□□□□□ -1.94
SDC1P18827 MTCO2P32-201ENST00000514865 403 ntBASIC2.91□□□□□ -1.94
SDC1P18827 RNA5SP468-201ENST00000516782 93 ntBASIC2.91□□□□□ -1.94
SDC1P18827 EEF1A1P37-201ENST00000522748 715 ntBASIC2.91□□□□□ -1.94
SDC1P18827 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.91□□□□□ -1.94
SDC1P18827 AL606834.2-201ENST00000602954 668 ntBASIC2.91□□□□□ -1.94
SDC1P18827 AL596327.1-201ENST00000603629 213 ntBASIC2.91□□□□□ -1.94
SDC1P18827 AL022099.1-201ENST00000604551 712 ntBASIC2.91□□□□□ -1.94
SDC1P18827 TUSC7.1-201ENST00000610969 165 ntBASIC2.91□□□□□ -1.94
SDC1P18827 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.91□□□□□ -1.94
SDC1P18827 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.91□□□□□ -1.94
SDC1P18827 AC095031.1-201ENST00000623685 672 ntBASIC2.91□□□□□ -1.94
SDC1P18827 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
SDC1P18827 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.91□□□□□ -1.94
SDC1P18827 CRYM-AS1-204ENST00000637983 556 ntBASIC2.91□□□□□ -1.94
SDC1P18827 MTND5P19-201ENST00000424872 1794 ntBASIC2.91□□□□□ -1.94
SDC1P18827 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.91□□□□□ -1.94
SDC1P18827 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.91□□□□□ -1.94
SDC1P18827 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
SDC1P18827 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SDC1P18827 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
SDC1P18827 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.9□□□□□ -1.95
SDC1P18827 FRG1BP-201ENST00000278882 761 ntBASIC2.9□□□□□ -1.95
SDC1P18827 RNU6-882P-201ENST00000391025 103 ntBASIC2.9□□□□□ -1.95
SDC1P18827 RNU4-47P-201ENST00000410876 114 ntBASIC2.9□□□□□ -1.95
SDC1P18827 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.9□□□□□ -1.95
SDC1P18827 HIGD1AP15-201ENST00000416198 280 ntBASIC2.9□□□□□ -1.95
SDC1P18827 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.9□□□□□ -1.95
SDC1P18827 OR2B8P-201ENST00000432841 938 ntBASIC2.9□□□□□ -1.95
SDC1P18827 AC091862.1-201ENST00000438016 1100 ntBASIC2.9□□□□□ -1.95
SDC1P18827 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.9□□□□□ -1.95
SDC1P18827 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.9□□□□□ -1.95
SDC1P18827 PRDX3P3-201ENST00000447765 522 ntBASIC2.9□□□□□ -1.95
SDC1P18827 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.9□□□□□ -1.95
SDC1P18827 RPL23AP31-201ENST00000456160 467 ntBASIC2.9□□□□□ -1.95
SDC1P18827 SNORA84-201ENST00000459229 133 ntBASIC2.9□□□□□ -1.95
SDC1P18827 RPL7P5-201ENST00000471472 736 ntBASIC2.9□□□□□ -1.95
SDC1P18827 RN7SL633P-201ENST00000488974 297 ntBASIC2.9□□□□□ -1.95
SDC1P18827 AC147055.4-201ENST00000504399 745 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms