Protein–RNA interactions for Protein: P12814

ACTN1, Alpha-actinin-1, humanhuman

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1P12814 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
ACTN1P12814 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.82□□□□□ -1.8
ACTN1P12814 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
ACTN1P12814 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.82□□□□□ -1.8
ACTN1P12814 AC097714.1-201ENST00000511272 1647 ntBASIC3.81□□□□□ -1.8
ACTN1P12814 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.81□□□□□ -1.8
ACTN1P12814 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ACTN1P12814 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ACTN1P12814 DDX43P2-201ENST00000604753 1354 ntBASIC3.81□□□□□ -1.8
ACTN1P12814 RNA5SP374-201ENST00000362939 125 ntBASIC3.81□□□□□ -1.8
ACTN1P12814 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ACTN1P12814 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.81□□□□□ -1.8
ACTN1P12814 RNY3P9-201ENST00000384727 106 ntBASIC3.81□□□□□ -1.8
ACTN1P12814 MIR320C1-201ENST00000408566 88 ntBASIC3.81□□□□□ -1.8
ACTN1P12814 AIMP1P1-201ENST00000418670 937 ntBASIC3.81□□□□□ -1.8
ACTN1P12814 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.81□□□□□ -1.8
ACTN1P12814 MTCO2P5-201ENST00000422621 426 ntBASIC3.81□□□□□ -1.8
ACTN1P12814 MTND4P20-201ENST00000424125 869 ntBASIC3.81□□□□□ -1.8
ACTN1P12814 SDCBPP1-201ENST00000440192 890 ntBASIC3.81□□□□□ -1.8
ACTN1P12814 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.81□□□□□ -1.8
ACTN1P12814 PAXBP1P1-201ENST00000449315 447 ntBASIC3.81□□□□□ -1.8
ACTN1P12814 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.81□□□□□ -1.8
ACTN1P12814 RPL27AP5-201ENST00000469428 449 ntBASIC3.81□□□□□ -1.8
ACTN1P12814 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.81□□□□□ -1.8
ACTN1P12814 COX7A2P2-201ENST00000505291 250 ntBASIC3.81□□□□□ -1.8
ACTN1P12814 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.81□□□□□ -1.8
ACTN1P12814 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.81□□□□□ -1.8
ACTN1P12814 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.81□□□□□ -1.8
ACTN1P12814 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.81□□□□□ -1.8
ACTN1P12814 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.81□□□□□ -1.8
ACTN1P12814 AC090888.1-201ENST00000561335 1141 ntBASIC3.81□□□□□ -1.8
ACTN1P12814 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.81□□□□□ -1.8
ACTN1P12814 AC006504.3-201ENST00000586818 523 ntBASIC3.81□□□□□ -1.8
ACTN1P12814 AC067852.3-201ENST00000589177 561 ntBASIC3.81□□□□□ -1.8
ACTN1P12814 AL109653.1-201ENST00000603091 248 ntBASIC3.81□□□□□ -1.8
ACTN1P12814 AC012669.1-201ENST00000603209 283 ntBASIC3.81□□□□□ -1.8
ACTN1P12814 RNU6-88P-201ENST00000606801 100 ntBASIC3.81□□□□□ -1.8
ACTN1P12814 AC090425.2-201ENST00000608818 501 ntBASIC3.81□□□□□ -1.8
ACTN1P12814 AC072039.2-201ENST00000608883 439 ntBASIC3.81□□□□□ -1.8
ACTN1P12814 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.81□□□□□ -1.8
ACTN1P12814 AF246928.1-201ENST00000623768 87 ntBASIC3.81□□□□□ -1.8
ACTN1P12814 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.81□□□□□ -1.8
ACTN1P12814 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.81□□□□□ -1.8
ACTN1P12814 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.81□□□□□ -1.8
ACTN1P12814 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ACTN1P12814 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.81□□□□□ -1.8
ACTN1P12814 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
ACTN1P12814 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
ACTN1P12814 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.8□□□□□ -1.8
ACTN1P12814 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
ACTN1P12814 RNU6-462P-201ENST00000362659 105 ntBASIC3.8□□□□□ -1.8
ACTN1P12814 SNORA7.2-201ENST00000364446 145 ntBASIC3.8□□□□□ -1.8
ACTN1P12814 SNORD51-201ENST00000384320 80 ntBASIC3.8□□□□□ -1.8
ACTN1P12814 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.8□□□□□ -1.8
ACTN1P12814 RNU6-712P-201ENST00000410558 100 ntBASIC3.8□□□□□ -1.8
ACTN1P12814 RNU2-47P-201ENST00000410649 186 ntBASIC3.8□□□□□ -1.8
ACTN1P12814 COTL1P1-201ENST00000422309 375 ntBASIC3.8□□□□□ -1.8
ACTN1P12814 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.8□□□□□ -1.8
ACTN1P12814 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.8□□□□□ -1.8
ACTN1P12814 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.8□□□□□ -1.8
ACTN1P12814 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.8□□□□□ -1.8
ACTN1P12814 BET1P1-201ENST00000482276 359 ntBASIC3.8□□□□□ -1.8
ACTN1P12814 RN7SL504P-201ENST00000494496 287 ntBASIC3.8□□□□□ -1.8
ACTN1P12814 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ACTN1P12814 MTND5P4-201ENST00000514978 288 ntBASIC3.8□□□□□ -1.8
ACTN1P12814 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.8□□□□□ -1.8
ACTN1P12814 IGKV2-26-201ENST00000518305 343 ntBASIC3.8□□□□□ -1.8
ACTN1P12814 COX6CP8-201ENST00000522620 226 ntBASIC3.8□□□□□ -1.8
ACTN1P12814 AP004371.1-201ENST00000525240 214 ntBASIC3.8□□□□□ -1.8
ACTN1P12814 HIGD1AP10-201ENST00000527837 282 ntBASIC3.8□□□□□ -1.8
ACTN1P12814 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.8□□□□□ -1.8
ACTN1P12814 AC027807.1-201ENST00000559921 996 ntBASIC3.8□□□□□ -1.8
ACTN1P12814 MIR5004-201ENST00000579078 107 ntBASIC3.8□□□□□ -1.8
ACTN1P12814 MIR4276-201ENST00000584832 70 ntBASIC3.8□□□□□ -1.8
ACTN1P12814 AC011468.4-201ENST00000603942 409 ntBASIC3.8□□□□□ -1.8
ACTN1P12814 AC128687.1-201ENST00000605304 619 ntBASIC3.8□□□□□ -1.8
ACTN1P12814 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.8□□□□□ -1.8
ACTN1P12814 AC004223.4-201ENST00000612426 332 ntBASIC3.8□□□□□ -1.8
ACTN1P12814 Z99129.2-201ENST00000619967 314 ntBASIC3.8□□□□□ -1.8
ACTN1P12814 AL445264.1-201ENST00000621719 171 ntBASIC3.8□□□□□ -1.8
ACTN1P12814 AC079248.2-201ENST00000623779 326 ntBASIC3.8□□□□□ -1.8
ACTN1P12814 CU459211.1-201ENST00000635667 749 ntBASIC3.8□□□□□ -1.8
ACTN1P12814 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ACTN1P12814 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
ACTN1P12814 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ACTN1P12814 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ACTN1P12814 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ACTN1P12814 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ACTN1P12814 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.79□□□□□ -1.8
ACTN1P12814 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
ACTN1P12814 AC011477.1-204ENST00000623416 1325 ntBASIC3.79□□□□□ -1.8
ACTN1P12814 RNU6-335P-201ENST00000364563 113 ntBASIC3.79□□□□□ -1.8
ACTN1P12814 SNORA51.2-201ENST00000364595 132 ntBASIC3.79□□□□□ -1.8
ACTN1P12814 Y_RNA.510-201ENST00000384511 114 ntBASIC3.79□□□□□ -1.8
ACTN1P12814 RPS15AP38-201ENST00000413110 372 ntBASIC3.79□□□□□ -1.8
ACTN1P12814 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.79□□□□□ -1.8
ACTN1P12814 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.79□□□□□ -1.8
ACTN1P12814 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.79□□□□□ -1.8
ACTN1P12814 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.79□□□□□ -1.8
ACTN1P12814 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms