Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 MT-TC-201ENST00000387405 66 ntBASIC2.88□□□□□ -1.95
RETP07949 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
RETP07949 SFR1P2-201ENST00000421841 730 ntBASIC2.88□□□□□ -1.95
RETP07949 AL354692.1-201ENST00000423044 315 ntBASIC2.88□□□□□ -1.95
RETP07949 AL035410.1-201ENST00000427409 427 ntBASIC2.88□□□□□ -1.95
RETP07949 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2.88□□□□□ -1.95
RETP07949 ARL5AP4-201ENST00000430731 512 ntBASIC2.88□□□□□ -1.95
RETP07949 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.88□□□□□ -1.95
RETP07949 AL050341.1-201ENST00000447743 313 ntBASIC2.88□□□□□ -1.95
RETP07949 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.88□□□□□ -1.95
RETP07949 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.88□□□□□ -1.95
RETP07949 FCF1P6-201ENST00000456841 595 ntBASIC2.88□□□□□ -1.95
RETP07949 RPS20P22-201ENST00000473700 357 ntBASIC2.88□□□□□ -1.95
RETP07949 AC010301.1-201ENST00000473936 355 ntBASIC2.88□□□□□ -1.95
RETP07949 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.88□□□□□ -1.95
RETP07949 AC009901.1-201ENST00000506703 541 ntBASIC2.88□□□□□ -1.95
RETP07949 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.88□□□□□ -1.95
RETP07949 MTATP6P9-201ENST00000515039 680 ntBASIC2.88□□□□□ -1.95
RETP07949 AC022690.1-201ENST00000526681 550 ntBASIC2.88□□□□□ -1.95
RETP07949 AP000873.5-201ENST00000533906 236 ntBASIC2.88□□□□□ -1.95
RETP07949 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RETP07949 AC125611.2-201ENST00000551907 647 ntBASIC2.88□□□□□ -1.95
RETP07949 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.88□□□□□ -1.95
RETP07949 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.88□□□□□ -1.95
RETP07949 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.88□□□□□ -1.95
RETP07949 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.88□□□□□ -1.95
RETP07949 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.88□□□□□ -1.95
RETP07949 AC234778.2-201ENST00000566241 354 ntBASIC2.88□□□□□ -1.95
RETP07949 AC122134.1-202ENST00000569111 1201 ntBASIC2.88□□□□□ -1.95
RETP07949 SNORD53-201ENST00000579969 78 ntBASIC2.88□□□□□ -1.95
RETP07949 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.88□□□□□ -1.95
RETP07949 AC012119.1-201ENST00000603184 222 ntBASIC2.88□□□□□ -1.95
RETP07949 AF129408.1-201ENST00000608767 431 ntBASIC2.88□□□□□ -1.95
RETP07949 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.88□□□□□ -1.95
RETP07949 AC002064.3-201ENST00000623448 346 ntBASIC2.88□□□□□ -1.95
RETP07949 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.88□□□□□ -1.95
RETP07949 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
RETP07949 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
RETP07949 AC091564.4-201ENST00000533934 2194 ntBASIC2.88□□□□□ -1.95
RETP07949 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.88□□□□□ -1.95
RETP07949 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
RETP07949 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
RETP07949 AP006437.1-201ENST00000641440 3685 ntBASIC2.87□□□□□ -1.95
RETP07949 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
RETP07949 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
RETP07949 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.87□□□□□ -1.95
RETP07949 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.87□□□□□ -1.95
RETP07949 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
RETP07949 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.87□□□□□ -1.95
RETP07949 AC073325.2-201ENST00000339545 159 ntBASIC2.87□□□□□ -1.95
RETP07949 U8.2-201ENST00000363156 134 ntBASIC2.87□□□□□ -1.95
RETP07949 RNU5B-4P-201ENST00000363508 111 ntBASIC2.87□□□□□ -1.95
RETP07949 BX682237.1-201ENST00000415016 335 ntBASIC2.87□□□□□ -1.95
RETP07949 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.87□□□□□ -1.95
RETP07949 AL592437.1-201ENST00000443781 492 ntBASIC2.87□□□□□ -1.95
RETP07949 NDUFA5P7-201ENST00000452914 242 ntBASIC2.87□□□□□ -1.95
RETP07949 HMGB1P25-201ENST00000468402 607 ntBASIC2.87□□□□□ -1.95
RETP07949 AC091860.1-201ENST00000505723 432 ntBASIC2.87□□□□□ -1.95
RETP07949 RNU6-885P-201ENST00000516607 104 ntBASIC2.87□□□□□ -1.95
RETP07949 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.87□□□□□ -1.95
RETP07949 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
RETP07949 AL669831.4-202ENST00000590817 238 ntBASIC2.87□□□□□ -1.95
RETP07949 RPL23AP78-201ENST00000599928 470 ntBASIC2.87□□□□□ -1.95
RETP07949 AC024933.1-201ENST00000608472 348 ntBASIC2.87□□□□□ -1.95
RETP07949 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
RETP07949 Z99129.2-201ENST00000619967 314 ntBASIC2.87□□□□□ -1.95
RETP07949 AC009269.6-201ENST00000621778 588 ntBASIC2.87□□□□□ -1.95
RETP07949 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.87□□□□□ -1.95
RETP07949 AC126544.2-201ENST00000625174 749 ntBASIC2.87□□□□□ -1.95
RETP07949 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.87□□□□□ -1.95
RETP07949 ASNSP3-201ENST00000451989 1306 ntBASIC2.87□□□□□ -1.95
RETP07949 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RETP07949 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.86□□□□□ -1.95
RETP07949 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
RETP07949 AL161431.1-201ENST00000618966 4205 ntBASIC2.86□□□□□ -1.95
RETP07949 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.86□□□□□ -1.95
RETP07949 RNU6-989P-201ENST00000362756 107 ntBASIC2.86□□□□□ -1.95
RETP07949 RNU6-619P-201ENST00000365146 108 ntBASIC2.86□□□□□ -1.95
RETP07949 RNU6-339P-201ENST00000384310 107 ntBASIC2.86□□□□□ -1.95
RETP07949 MIR649-201ENST00000384843 97 ntBASIC2.86□□□□□ -1.95
RETP07949 FO393413.1-201ENST00000402892 195 ntBASIC2.86□□□□□ -1.95
RETP07949 AL513477.1-202ENST00000417061 214 ntBASIC2.86□□□□□ -1.95
RETP07949 AC233981.1-201ENST00000423224 461 ntBASIC2.86□□□□□ -1.95
RETP07949 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.86□□□□□ -1.95
RETP07949 AC096632.1-201ENST00000427395 310 ntBASIC2.86□□□□□ -1.95
RETP07949 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.86□□□□□ -1.95
RETP07949 RPL31P54-201ENST00000429803 370 ntBASIC2.86□□□□□ -1.95
RETP07949 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
RETP07949 ARF4P4-201ENST00000439608 520 ntBASIC2.86□□□□□ -1.95
RETP07949 AC002542.1-201ENST00000440683 193 ntBASIC2.86□□□□□ -1.95
RETP07949 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.86□□□□□ -1.95
RETP07949 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.86□□□□□ -1.95
RETP07949 AP000936.2-201ENST00000447151 681 ntBASIC2.86□□□□□ -1.95
RETP07949 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.86□□□□□ -1.95
RETP07949 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC2.86□□□□□ -1.95
RETP07949 AC104073.1-201ENST00000451988 151 ntBASIC2.86□□□□□ -1.95
RETP07949 snoU13.15-201ENST00000459407 104 ntBASIC2.86□□□□□ -1.95
RETP07949 AP001025.2-201ENST00000490908 477 ntBASIC2.86□□□□□ -1.95
RETP07949 OR5H5P-201ENST00000503164 928 ntBASIC2.86□□□□□ -1.95
RETP07949 AIG1P1-201ENST00000503376 148 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 150.4 ms