Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 snoU109.4-201ENST00000458953 143 ntBASIC2.44□□□□□ -2.02
CD74P04233 AC092757.1-201ENST00000467293 467 ntBASIC2.44□□□□□ -2.02
CD74P04233 RN7SL807P-201ENST00000470923 297 ntBASIC2.44□□□□□ -2.02
CD74P04233 AC117440.1-201ENST00000474107 571 ntBASIC2.44□□□□□ -2.02
CD74P04233 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.44□□□□□ -2.02
CD74P04233 AC079203.1-201ENST00000487972 404 ntBASIC2.44□□□□□ -2.02
CD74P04233 AP001025.2-201ENST00000490908 477 ntBASIC2.44□□□□□ -2.02
CD74P04233 AC026427.2-201ENST00000506228 536 ntBASIC2.44□□□□□ -2.02
CD74P04233 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CD74P04233 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.44□□□□□ -2.02
CD74P04233 OR7K1P-201ENST00000546439 926 ntBASIC2.44□□□□□ -2.02
CD74P04233 AC126177.3-201ENST00000551839 688 ntBASIC2.44□□□□□ -2.02
CD74P04233 GTF2IP8-201ENST00000560687 584 ntBASIC2.44□□□□□ -2.02
CD74P04233 MIR3200-201ENST00000580767 85 ntBASIC2.44□□□□□ -2.02
CD74P04233 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.44□□□□□ -2.02
CD74P04233 AL158050.2-201ENST00000605336 568 ntBASIC2.44□□□□□ -2.02
CD74P04233 AF129408.1-201ENST00000608767 431 ntBASIC2.44□□□□□ -2.02
CD74P04233 AL109620.1-201ENST00000618738 1197 ntBASIC2.44□□□□□ -2.02
CD74P04233 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.44□□□□□ -2.02
CD74P04233 AC084824.4-201ENST00000620106 731 ntBASIC2.44□□□□□ -2.02
CD74P04233 AP003485.1-201ENST00000625093 753 ntBASIC2.44□□□□□ -2.02
CD74P04233 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.44□□□□□ -2.02
CD74P04233 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.44□□□□□ -2.02
CD74P04233 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
CD74P04233 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.44□□□□□ -2.02
CD74P04233 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.44□□□□□ -2.02
CD74P04233 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.44□□□□□ -2.02
CD74P04233 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.43□□□□□ -2.02
CD74P04233 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CD74P04233 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.43□□□□□ -2.02
CD74P04233 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
CD74P04233 NUP58P1-201ENST00000502546 1738 ntBASIC2.43□□□□□ -2.02
CD74P04233 RNU6-1180P-201ENST00000364935 107 ntBASIC2.43□□□□□ -2.02
CD74P04233 SNORD21-201ENST00000383953 95 ntBASIC2.43□□□□□ -2.02
CD74P04233 RNU6-1176P-201ENST00000390955 107 ntBASIC2.43□□□□□ -2.02
CD74P04233 ARF4P3-201ENST00000397387 509 ntBASIC2.43□□□□□ -2.02
CD74P04233 SNRPEP2-201ENST00000397592 279 ntBASIC2.43□□□□□ -2.02
CD74P04233 MTCO1P56-201ENST00000401674 224 ntBASIC2.43□□□□□ -2.02
CD74P04233 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CD74P04233 RNU2-25P-201ENST00000411041 191 ntBASIC2.43□□□□□ -2.02
CD74P04233 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.43□□□□□ -2.02
CD74P04233 OR4K6P-201ENST00000416478 897 ntBASIC2.43□□□□□ -2.02
CD74P04233 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.43□□□□□ -2.02
CD74P04233 AL645937.1-202ENST00000421799 937 ntBASIC2.43□□□□□ -2.02
CD74P04233 AC091390.3-201ENST00000426478 338 ntBASIC2.43□□□□□ -2.02
CD74P04233 AC005326.1-201ENST00000429197 123 ntBASIC2.43□□□□□ -2.02
CD74P04233 AC012497.1-201ENST00000429392 575 ntBASIC2.43□□□□□ -2.02
CD74P04233 GTF2IP3-201ENST00000433887 494 ntBASIC2.43□□□□□ -2.02
CD74P04233 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.43□□□□□ -2.02
CD74P04233 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.43□□□□□ -2.02
CD74P04233 VN1R10P-201ENST00000447106 875 ntBASIC2.43□□□□□ -2.02
CD74P04233 AC112492.1-201ENST00000449607 712 ntBASIC2.43□□□□□ -2.02
CD74P04233 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
CD74P04233 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.43□□□□□ -2.02
CD74P04233 AC234775.1-201ENST00000454247 670 ntBASIC2.43□□□□□ -2.02
CD74P04233 AC090525.1-201ENST00000479116 478 ntBASIC2.43□□□□□ -2.02
CD74P04233 AC069528.1-202ENST00000482888 637 ntBASIC2.43□□□□□ -2.02
CD74P04233 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.43□□□□□ -2.02
CD74P04233 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.43□□□□□ -2.02
CD74P04233 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.43□□□□□ -2.02
CD74P04233 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.43□□□□□ -2.02
CD74P04233 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CD74P04233 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.43□□□□□ -2.02
CD74P04233 FAM60BP-201ENST00000578364 658 ntBASIC2.43□□□□□ -2.02
CD74P04233 AC138761.3-201ENST00000579993 334 ntBASIC2.43□□□□□ -2.02
CD74P04233 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.43□□□□□ -2.02
CD74P04233 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.43□□□□□ -2.02
CD74P04233 AL160281.1-201ENST00000605307 311 ntBASIC2.43□□□□□ -2.02
CD74P04233 AL121652.1-201ENST00000608851 448 ntBASIC2.43□□□□□ -2.02
CD74P04233 AP001521.1-201ENST00000609150 300 ntBASIC2.43□□□□□ -2.02
CD74P04233 AL158163.2-201ENST00000619110 700 ntBASIC2.43□□□□□ -2.02
CD74P04233 CR381653.2-201ENST00000624041 768 ntBASIC2.43□□□□□ -2.02
CD74P04233 AC010872.1-201ENST00000624225 675 ntBASIC2.43□□□□□ -2.02
CD74P04233 AP005901.5-201ENST00000545779 1796 ntBASIC2.43□□□□□ -2.02
CD74P04233 AL513185.3-201ENST00000433335 1300 ntBASIC2.42□□□□□ -2.02
CD74P04233 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
CD74P04233 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
CD74P04233 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CD74P04233 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.42□□□□□ -2.02
CD74P04233 SNORA25.6-201ENST00000364121 118 ntBASIC2.42□□□□□ -2.02
CD74P04233 SUGT1P1-201ENST00000379514 476 ntBASIC2.42□□□□□ -2.02
CD74P04233 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
CD74P04233 U3.19-201ENST00000390893 196 ntBASIC2.42□□□□□ -2.02
CD74P04233 RNA5SP252-201ENST00000391131 119 ntBASIC2.42□□□□□ -2.02
CD74P04233 AL356057.2-201ENST00000403318 432 ntBASIC2.42□□□□□ -2.02
CD74P04233 AL139095.1-201ENST00000404326 391 ntBASIC2.42□□□□□ -2.02
CD74P04233 RNU4-47P-201ENST00000410876 114 ntBASIC2.42□□□□□ -2.02
CD74P04233 RNA5SP120-201ENST00000410900 112 ntBASIC2.42□□□□□ -2.02
CD74P04233 AC092447.6-201ENST00000414578 210 ntBASIC2.42□□□□□ -2.02
CD74P04233 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.42□□□□□ -2.02
CD74P04233 EZH2P1-201ENST00000431167 291 ntBASIC2.42□□□□□ -2.02
CD74P04233 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.42□□□□□ -2.02
CD74P04233 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.42□□□□□ -2.02
CD74P04233 LSM1P1-201ENST00000438629 273 ntBASIC2.42□□□□□ -2.02
CD74P04233 MRPL50P4-201ENST00000446432 475 ntBASIC2.42□□□□□ -2.02
CD74P04233 Z75741.1-201ENST00000446793 314 ntBASIC2.42□□□□□ -2.02
CD74P04233 ST13P20-201ENST00000447996 1065 ntBASIC2.42□□□□□ -2.02
CD74P04233 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.42□□□□□ -2.02
CD74P04233 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.42□□□□□ -2.02
CD74P04233 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms