Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.27□□□□□ -2.05
HLA-DQA1P01909 SNORA70.16-201ENST00000516390 95 ntBASIC2.27□□□□□ -2.05
HLA-DQA1P01909 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.27□□□□□ -2.05
HLA-DQA1P01909 ERHP1-201ENST00000523006 310 ntBASIC2.27□□□□□ -2.05
HLA-DQA1P01909 DEFB131D-201ENST00000526803 184 ntBASIC2.27□□□□□ -2.05
HLA-DQA1P01909 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.27□□□□□ -2.05
HLA-DQA1P01909 SETP2-201ENST00000553886 926 ntBASIC2.27□□□□□ -2.05
HLA-DQA1P01909 AC034105.3-201ENST00000565294 442 ntBASIC2.27□□□□□ -2.05
HLA-DQA1P01909 OR4K7P-201ENST00000580232 945 ntBASIC2.27□□□□□ -2.05
HLA-DQA1P01909 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.27□□□□□ -2.05
HLA-DQA1P01909 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.27□□□□□ -2.05
HLA-DQA1P01909 MIR4276-201ENST00000584832 70 ntBASIC2.27□□□□□ -2.05
HLA-DQA1P01909 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.27□□□□□ -2.05
HLA-DQA1P01909 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.27□□□□□ -2.05
HLA-DQA1P01909 AC092953.2-201ENST00000608000 699 ntBASIC2.27□□□□□ -2.05
HLA-DQA1P01909 AL133445.2-201ENST00000611191 527 ntBASIC2.27□□□□□ -2.05
HLA-DQA1P01909 AC006133.1-201ENST00000617106 264 ntBASIC2.27□□□□□ -2.05
HLA-DQA1P01909 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
HLA-DQA1P01909 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.27□□□□□ -2.05
HLA-DQA1P01909 AC090617.7-201ENST00000623952 126 ntBASIC2.27□□□□□ -2.05
HLA-DQA1P01909 AL079343.1-201ENST00000572358 1771 ntBASIC2.27□□□□□ -2.05
HLA-DQA1P01909 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.27□□□□□ -2.05
HLA-DQA1P01909 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
HLA-DQA1P01909 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
HLA-DQA1P01909 OR1S2-201ENST00000302592 978 ntBASIC2.26□□□□□ -2.05
HLA-DQA1P01909 Y_RNA.311-201ENST00000365068 96 ntBASIC2.26□□□□□ -2.05
HLA-DQA1P01909 Y_RNA.465-201ENST00000384293 102 ntBASIC2.26□□□□□ -2.05
HLA-DQA1P01909 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
HLA-DQA1P01909 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.26□□□□□ -2.05
HLA-DQA1P01909 MTND4P13-201ENST00000402078 1023 ntBASIC2.26□□□□□ -2.05
HLA-DQA1P01909 RNU2-43P-201ENST00000410306 190 ntBASIC2.26□□□□□ -2.05
HLA-DQA1P01909 BX323014.1-201ENST00000412876 237 ntBASIC2.26□□□□□ -2.05
HLA-DQA1P01909 HSFY4P-201ENST00000415994 1181 ntBASIC2.26□□□□□ -2.05
HLA-DQA1P01909 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.26□□□□□ -2.05
HLA-DQA1P01909 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.26□□□□□ -2.05
HLA-DQA1P01909 RPL21P32-201ENST00000419877 477 ntBASIC2.26□□□□□ -2.05
HLA-DQA1P01909 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.26□□□□□ -2.05
HLA-DQA1P01909 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.26□□□□□ -2.05
HLA-DQA1P01909 ATP5JP1-201ENST00000431631 322 ntBASIC2.26□□□□□ -2.05
HLA-DQA1P01909 RPS29P6-201ENST00000438196 145 ntBASIC2.26□□□□□ -2.05
HLA-DQA1P01909 AC108734.1-201ENST00000439549 399 ntBASIC2.26□□□□□ -2.05
HLA-DQA1P01909 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.26□□□□□ -2.05
HLA-DQA1P01909 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC2.26□□□□□ -2.05
HLA-DQA1P01909 AC140076.1-201ENST00000449897 361 ntBASIC2.26□□□□□ -2.05
HLA-DQA1P01909 RPL21P134-201ENST00000453468 483 ntBASIC2.26□□□□□ -2.05
HLA-DQA1P01909 AP000705.1-201ENST00000454567 350 ntBASIC2.26□□□□□ -2.05
HLA-DQA1P01909 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.26□□□□□ -2.05
HLA-DQA1P01909 AL359385.1-201ENST00000456509 365 ntBASIC2.26□□□□□ -2.05
HLA-DQA1P01909 MTND1P16-201ENST00000465177 898 ntBASIC2.26□□□□□ -2.05
HLA-DQA1P01909 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC2.26□□□□□ -2.05
HLA-DQA1P01909 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HLA-DQA1P01909 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.26□□□□□ -2.05
HLA-DQA1P01909 MTND5P4-201ENST00000514978 288 ntBASIC2.26□□□□□ -2.05
HLA-DQA1P01909 RNU6-150P-201ENST00000516237 95 ntBASIC2.26□□□□□ -2.05
HLA-DQA1P01909 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.26□□□□□ -2.05
HLA-DQA1P01909 FAM60DP-201ENST00000524174 632 ntBASIC2.26□□□□□ -2.05
HLA-DQA1P01909 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
HLA-DQA1P01909 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.26□□□□□ -2.05
HLA-DQA1P01909 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.26□□□□□ -2.05
HLA-DQA1P01909 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.26□□□□□ -2.05
HLA-DQA1P01909 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.26□□□□□ -2.05
HLA-DQA1P01909 MIR1254-2-201ENST00000579553 63 ntBASIC2.26□□□□□ -2.05
HLA-DQA1P01909 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.26□□□□□ -2.05
HLA-DQA1P01909 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.26□□□□□ -2.05
HLA-DQA1P01909 AC013444.2-201ENST00000603317 787 ntBASIC2.26□□□□□ -2.05
HLA-DQA1P01909 AC106052.1-201ENST00000608029 497 ntBASIC2.26□□□□□ -2.05
HLA-DQA1P01909 AC009570.1-201ENST00000609599 745 ntBASIC2.26□□□□□ -2.05
HLA-DQA1P01909 TUG1_1.1-201ENST00000610654 145 ntBASIC2.26□□□□□ -2.05
HLA-DQA1P01909 AL590099.1-201ENST00000615276 138 ntBASIC2.26□□□□□ -2.05
HLA-DQA1P01909 AC006386.1-201ENST00000619436 415 ntBASIC2.26□□□□□ -2.05
HLA-DQA1P01909 AC012314.7-201ENST00000619693 93 ntBASIC2.26□□□□□ -2.05
HLA-DQA1P01909 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.26□□□□□ -2.05
HLA-DQA1P01909 AC090897.3-201ENST00000636973 1157 ntBASIC2.26□□□□□ -2.05
HLA-DQA1P01909 CRYM-AS1-204ENST00000637983 556 ntBASIC2.26□□□□□ -2.05
HLA-DQA1P01909 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HLA-DQA1P01909 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.26□□□□□ -2.05
HLA-DQA1P01909 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.26□□□□□ -2.05
HLA-DQA1P01909 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
HLA-DQA1P01909 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HLA-DQA1P01909 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.25□□□□□ -2.05
HLA-DQA1P01909 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
HLA-DQA1P01909 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
HLA-DQA1P01909 MIR670-201ENST00000390142 98 ntBASIC2.25□□□□□ -2.05
HLA-DQA1P01909 SNORD17-201ENST00000390930 237 ntBASIC2.25□□□□□ -2.05
HLA-DQA1P01909 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.25□□□□□ -2.05
HLA-DQA1P01909 MTCO2P8-201ENST00000412213 658 ntBASIC2.25□□□□□ -2.05
HLA-DQA1P01909 SYF2P2-201ENST00000417620 583 ntBASIC2.25□□□□□ -2.05
HLA-DQA1P01909 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.25□□□□□ -2.05
HLA-DQA1P01909 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC2.25□□□□□ -2.05
HLA-DQA1P01909 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.25□□□□□ -2.05
HLA-DQA1P01909 AC233728.2-201ENST00000425348 757 ntBASIC2.25□□□□□ -2.05
HLA-DQA1P01909 GCA-203ENST00000429691 824 ntTSL 3 BASIC2.25□□□□□ -2.05
HLA-DQA1P01909 AC109583.1-201ENST00000432156 268 ntBASIC2.25□□□□□ -2.05
HLA-DQA1P01909 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.25□□□□□ -2.05
HLA-DQA1P01909 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.25□□□□□ -2.05
HLA-DQA1P01909 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.25□□□□□ -2.05
HLA-DQA1P01909 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.25□□□□□ -2.05
HLA-DQA1P01909 RPL26P6-201ENST00000440913 438 ntBASIC2.25□□□□□ -2.05
HLA-DQA1P01909 MTND5P14-201ENST00000441481 1267 ntBASIC2.25□□□□□ -2.05
HLA-DQA1P01909 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms