Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 RN7SKP132-201ENST00000516001 208 ntBASIC3.31□□□□□ -1.88
PDGFBP01127 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.31□□□□□ -1.88
PDGFBP01127 AC104986.1-201ENST00000517978 436 ntBASIC3.31□□□□□ -1.88
PDGFBP01127 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.31□□□□□ -1.88
PDGFBP01127 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PDGFBP01127 MIR4319-201ENST00000577285 85 ntBASIC3.31□□□□□ -1.88
PDGFBP01127 MIR3186-201ENST00000577404 85 ntBASIC3.31□□□□□ -1.88
PDGFBP01127 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.31□□□□□ -1.88
PDGFBP01127 AL158042.1-201ENST00000605338 460 ntBASIC3.31□□□□□ -1.88
PDGFBP01127 AP002826.1-201ENST00000608835 315 ntBASIC3.31□□□□□ -1.88
PDGFBP01127 AC009570.1-201ENST00000609599 745 ntBASIC3.31□□□□□ -1.88
PDGFBP01127 MIR6076-201ENST00000617521 113 ntBASIC3.31□□□□□ -1.88
PDGFBP01127 AC011330.2-201ENST00000621680 635 ntBASIC3.31□□□□□ -1.88
PDGFBP01127 AP000770.2-201ENST00000623694 100 ntBASIC3.31□□□□□ -1.88
PDGFBP01127 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PDGFBP01127 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PDGFBP01127 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.31□□□□□ -1.88
PDGFBP01127 MFSD8-233ENST00000641482 4860 ntBASIC3.31□□□□□ -1.88
PDGFBP01127 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PDGFBP01127 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.31□□□□□ -1.88
PDGFBP01127 AC103988.1-201ENST00000566382 2177 ntBASIC3.31□□□□□ -1.88
PDGFBP01127 NCAPGP1-201ENST00000505112 1814 ntBASIC3.3□□□□□ -1.88
PDGFBP01127 TAB3P1-202ENST00000452645 1634 ntBASIC3.3□□□□□ -1.88
PDGFBP01127 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PDGFBP01127 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
PDGFBP01127 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.3□□□□□ -1.88
PDGFBP01127 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.3□□□□□ -1.88
PDGFBP01127 RNU4-92P-201ENST00000363783 136 ntBASIC3.3□□□□□ -1.88
PDGFBP01127 SNORA54-201ENST00000384281 123 ntBASIC3.3□□□□□ -1.88
PDGFBP01127 RNU6-882P-201ENST00000391025 103 ntBASIC3.3□□□□□ -1.88
PDGFBP01127 MTATP6P27-201ENST00000416987 621 ntBASIC3.3□□□□□ -1.88
PDGFBP01127 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.3□□□□□ -1.88
PDGFBP01127 BEND7P1-201ENST00000422058 457 ntBASIC3.3□□□□□ -1.88
PDGFBP01127 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.3□□□□□ -1.88
PDGFBP01127 ATP5HP2-201ENST00000433885 485 ntBASIC3.3□□□□□ -1.88
PDGFBP01127 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC3.3□□□□□ -1.88
PDGFBP01127 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.3□□□□□ -1.88
PDGFBP01127 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PDGFBP01127 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.3□□□□□ -1.88
PDGFBP01127 HMGB1P28-201ENST00000507778 552 ntBASIC3.3□□□□□ -1.88
PDGFBP01127 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.3□□□□□ -1.88
PDGFBP01127 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PDGFBP01127 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PDGFBP01127 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.3□□□□□ -1.88
PDGFBP01127 AC091544.4-201ENST00000555268 342 ntBASIC3.3□□□□□ -1.88
PDGFBP01127 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.3□□□□□ -1.88
PDGFBP01127 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.3□□□□□ -1.88
PDGFBP01127 MAGOH2P-202ENST00000584384 429 ntBASIC3.3□□□□□ -1.88
PDGFBP01127 VN1R90P-201ENST00000595717 726 ntBASIC3.3□□□□□ -1.88
PDGFBP01127 KLKP1-201ENST00000595979 403 ntBASIC3.3□□□□□ -1.88
PDGFBP01127 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.3□□□□□ -1.88
PDGFBP01127 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.3□□□□□ -1.88
PDGFBP01127 AL022099.1-201ENST00000604551 712 ntBASIC3.3□□□□□ -1.88
PDGFBP01127 TUG1_1.1-201ENST00000610654 145 ntBASIC3.3□□□□□ -1.88
PDGFBP01127 AC100793.4-201ENST00000613683 429 ntBASIC3.3□□□□□ -1.88
PDGFBP01127 AC023158.2-201ENST00000614876 543 ntBASIC3.3□□□□□ -1.88
PDGFBP01127 AC092628.2-201ENST00000622492 339 ntBASIC3.3□□□□□ -1.88
PDGFBP01127 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.3□□□□□ -1.88
PDGFBP01127 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PDGFBP01127 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PDGFBP01127 AC073073.2-201ENST00000609827 2578 ntBASIC3.3□□□□□ -1.88
PDGFBP01127 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PDGFBP01127 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
PDGFBP01127 AL356473.1-201ENST00000406203 1408 ntBASIC3.29□□□□□ -1.88
PDGFBP01127 AC006504.1-201ENST00000562493 3666 ntBASIC3.29□□□□□ -1.88
PDGFBP01127 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
PDGFBP01127 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.29□□□□□ -1.88
PDGFBP01127 OR5BR1P-201ENST00000524992 1330 ntBASIC3.29□□□□□ -1.88
PDGFBP01127 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PDGFBP01127 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PDGFBP01127 RNU1-70P-201ENST00000362618 164 ntBASIC3.29□□□□□ -1.88
PDGFBP01127 RNU6-560P-201ENST00000364007 108 ntBASIC3.29□□□□□ -1.88
PDGFBP01127 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
PDGFBP01127 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
PDGFBP01127 SNORA1.3-201ENST00000384676 136 ntBASIC3.29□□□□□ -1.88
PDGFBP01127 RNU1-101P-201ENST00000391171 127 ntBASIC3.29□□□□□ -1.88
PDGFBP01127 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.29□□□□□ -1.88
PDGFBP01127 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.29□□□□□ -1.88
PDGFBP01127 EEF1A1P41-201ENST00000414667 207 ntBASIC3.29□□□□□ -1.88
PDGFBP01127 HIGD1AP15-201ENST00000416198 280 ntBASIC3.29□□□□□ -1.88
PDGFBP01127 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.29□□□□□ -1.88
PDGFBP01127 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.29□□□□□ -1.88
PDGFBP01127 MTATP6P4-201ENST00000427725 675 ntBASIC3.29□□□□□ -1.88
PDGFBP01127 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
PDGFBP01127 MTND4P6-201ENST00000438297 472 ntBASIC3.29□□□□□ -1.88
PDGFBP01127 ATP5C1P1-201ENST00000441945 895 ntBASIC3.29□□□□□ -1.88
PDGFBP01127 OR6K5P-201ENST00000447050 945 ntBASIC3.29□□□□□ -1.88
PDGFBP01127 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.29□□□□□ -1.88
PDGFBP01127 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.29□□□□□ -1.88
PDGFBP01127 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.29□□□□□ -1.88
PDGFBP01127 RNA5SP310-201ENST00000459084 116 ntBASIC3.29□□□□□ -1.88
PDGFBP01127 AC090453.1-201ENST00000495560 436 ntBASIC3.29□□□□□ -1.88
PDGFBP01127 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.29□□□□□ -1.88
PDGFBP01127 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.29□□□□□ -1.88
PDGFBP01127 AC010265.1-201ENST00000513509 211 ntBASIC3.29□□□□□ -1.88
PDGFBP01127 RNU6-237P-201ENST00000515985 71 ntBASIC3.29□□□□□ -1.88
PDGFBP01127 SNORA31.1-201ENST00000515993 133 ntBASIC3.29□□□□□ -1.88
PDGFBP01127 SNORA31.5-201ENST00000516190 133 ntBASIC3.29□□□□□ -1.88
PDGFBP01127 RNU6-1231P-201ENST00000517185 103 ntBASIC3.29□□□□□ -1.88
PDGFBP01127 EEF1A1P37-201ENST00000522748 715 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms