Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AC004808.1-201ENST00000627671 721 ntBASIC3.01□□□□□ -1.93
RIPK2O43353 LRRC77P-213ENST00000637727 880 ntBASIC3.01□□□□□ -1.93
RIPK2O43353 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.01□□□□□ -1.93
RIPK2O43353 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3□□□□□ -1.93
RIPK2O43353 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3□□□□□ -1.93
RIPK2O43353 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3□□□□□ -1.93
RIPK2O43353 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3□□□□□ -1.93
RIPK2O43353 SNRPEP3-201ENST00000338402 276 ntBASIC3□□□□□ -1.93
RIPK2O43353 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3□□□□□ -1.93
RIPK2O43353 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3□□□□□ -1.93
RIPK2O43353 RNU6-76P-201ENST00000384060 104 ntBASIC3□□□□□ -1.93
RIPK2O43353 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
RIPK2O43353 AL079342.2-201ENST00000403367 482 ntBASIC3□□□□□ -1.93
RIPK2O43353 RPS3AP24-201ENST00000407896 734 ntBASIC3□□□□□ -1.93
RIPK2O43353 RNU6-193P-201ENST00000410977 107 ntBASIC3□□□□□ -1.93
RIPK2O43353 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3□□□□□ -1.93
RIPK2O43353 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3□□□□□ -1.93
RIPK2O43353 AC069157.1-201ENST00000421749 137 ntBASIC3□□□□□ -1.93
RIPK2O43353 AL365496.1-201ENST00000426885 215 ntBASIC3□□□□□ -1.93
RIPK2O43353 ARF4P4-201ENST00000439608 520 ntBASIC3□□□□□ -1.93
RIPK2O43353 AL133547.1-201ENST00000448546 220 ntBASIC3□□□□□ -1.93
RIPK2O43353 AC109925.1-201ENST00000478069 331 ntBASIC3□□□□□ -1.93
RIPK2O43353 RPL9P33-201ENST00000484311 566 ntBASIC3□□□□□ -1.93
RIPK2O43353 PRELID3BP6-201ENST00000503839 571 ntBASIC3□□□□□ -1.93
RIPK2O43353 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3□□□□□ -1.93
RIPK2O43353 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3□□□□□ -1.93
RIPK2O43353 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
RIPK2O43353 AC008837.1-201ENST00000511513 412 ntBASIC3□□□□□ -1.93
RIPK2O43353 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3□□□□□ -1.93
RIPK2O43353 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3□□□□□ -1.93
RIPK2O43353 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3□□□□□ -1.93
RIPK2O43353 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3□□□□□ -1.93
RIPK2O43353 AC023043.3-201ENST00000593113 385 ntBASIC3□□□□□ -1.93
RIPK2O43353 AL035413.2-201ENST00000604801 525 ntBASIC3□□□□□ -1.93
RIPK2O43353 AL137843.1-201ENST00000605078 385 ntBASIC3□□□□□ -1.93
RIPK2O43353 AC090115.4-201ENST00000609970 188 ntBASIC3□□□□□ -1.93
RIPK2O43353 AC124016.2-201ENST00000610058 665 ntBASIC3□□□□□ -1.93
RIPK2O43353 AC004696.1-201ENST00000614345 607 ntBASIC3□□□□□ -1.93
RIPK2O43353 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3□□□□□ -1.93
RIPK2O43353 AL596245.1-201ENST00000618994 362 ntBASIC3□□□□□ -1.93
RIPK2O43353 AC039056.2-201ENST00000622261 511 ntBASIC3□□□□□ -1.93
RIPK2O43353 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3□□□□□ -1.93
RIPK2O43353 AC012442.3-202ENST00000636742 206 ntBASIC3□□□□□ -1.93
RIPK2O43353 AC099654.8-201ENST00000637757 681 ntBASIC3□□□□□ -1.93
RIPK2O43353 MIR1322-201ENST00000638013 71 ntBASIC3□□□□□ -1.93
RIPK2O43353 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
RIPK2O43353 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.99□□□□□ -1.93
RIPK2O43353 AC005539.1-201ENST00000443768 1479 ntBASIC2.99□□□□□ -1.93
RIPK2O43353 RNU6-1180P-201ENST00000364935 107 ntBASIC2.99□□□□□ -1.93
RIPK2O43353 RNU6-1035P-201ENST00000384477 107 ntBASIC2.99□□□□□ -1.93
RIPK2O43353 SNORA26.7-201ENST00000391288 122 ntBASIC2.99□□□□□ -1.93
RIPK2O43353 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
RIPK2O43353 MIR887-201ENST00000401258 79 ntBASIC2.99□□□□□ -1.93
RIPK2O43353 AL603865.2-201ENST00000401679 213 ntBASIC2.99□□□□□ -1.93
RIPK2O43353 RNU2-25P-201ENST00000411041 191 ntBASIC2.99□□□□□ -1.93
RIPK2O43353 AC096533.1-201ENST00000411645 353 ntBASIC2.99□□□□□ -1.93
RIPK2O43353 BTF3P8-201ENST00000414577 526 ntBASIC2.99□□□□□ -1.93
RIPK2O43353 RPS7P9-201ENST00000414704 586 ntBASIC2.99□□□□□ -1.93
RIPK2O43353 SPA17P1-201ENST00000416656 452 ntBASIC2.99□□□□□ -1.93
RIPK2O43353 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC2.99□□□□□ -1.93
RIPK2O43353 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC2.99□□□□□ -1.93
RIPK2O43353 RPF2P1-201ENST00000424137 906 ntBASIC2.99□□□□□ -1.93
RIPK2O43353 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC2.99□□□□□ -1.93
RIPK2O43353 AC018644.1-201ENST00000429934 551 ntBASIC2.99□□□□□ -1.93
RIPK2O43353 AC091286.1-201ENST00000431233 461 ntBASIC2.99□□□□□ -1.93
RIPK2O43353 HMGN2P31-201ENST00000432430 273 ntBASIC2.99□□□□□ -1.93
RIPK2O43353 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
RIPK2O43353 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.99□□□□□ -1.93
RIPK2O43353 NDUFAF4P2-201ENST00000445374 520 ntBASIC2.99□□□□□ -1.93
RIPK2O43353 AC234775.1-201ENST00000454247 670 ntBASIC2.99□□□□□ -1.93
RIPK2O43353 RPL21P10-201ENST00000463521 490 ntBASIC2.99□□□□□ -1.93
RIPK2O43353 AC103987.1-201ENST00000473394 348 ntBASIC2.99□□□□□ -1.93
RIPK2O43353 HSPE1P6-201ENST00000479457 291 ntBASIC2.99□□□□□ -1.93
RIPK2O43353 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.99□□□□□ -1.93
RIPK2O43353 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.99□□□□□ -1.93
RIPK2O43353 HSPD1P15-201ENST00000505573 1122 ntBASIC2.99□□□□□ -1.93
RIPK2O43353 AC119751.4-201ENST00000507498 357 ntBASIC2.99□□□□□ -1.93
RIPK2O43353 OR8I1P-201ENST00000529291 931 ntBASIC2.99□□□□□ -1.93
RIPK2O43353 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
RIPK2O43353 AC011611.1-201ENST00000552179 197 ntBASIC2.99□□□□□ -1.93
RIPK2O43353 GTF2IP8-201ENST00000560687 584 ntBASIC2.99□□□□□ -1.93
RIPK2O43353 AC011458.1-201ENST00000604034 617 ntBASIC2.99□□□□□ -1.93
RIPK2O43353 AC090132.2-201ENST00000615881 347 ntBASIC2.99□□□□□ -1.93
RIPK2O43353 AL355493.4-201ENST00000618530 292 ntBASIC2.99□□□□□ -1.93
RIPK2O43353 AC068831.8-201ENST00000620171 435 ntBASIC2.99□□□□□ -1.93
RIPK2O43353 CR392039.5-201ENST00000623201 510 ntBASIC2.99□□□□□ -1.93
RIPK2O43353 AC009039.2-201ENST00000624524 529 ntBASIC2.99□□□□□ -1.93
RIPK2O43353 OR5H6-203ENST00000642105 978 ntBASIC2.99□□□□□ -1.93
RIPK2O43353 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.99□□□□□ -1.93
RIPK2O43353 AC022336.2-201ENST00000568966 2538 ntBASIC2.99□□□□□ -1.93
RIPK2O43353 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
RIPK2O43353 AL356473.1-201ENST00000406203 1408 ntBASIC2.99□□□□□ -1.93
RIPK2O43353 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.99□□□□□ -1.93
RIPK2O43353 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
RIPK2O43353 AC107982.1-201ENST00000507171 1300 ntBASIC2.98□□□□□ -1.93
RIPK2O43353 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
RIPK2O43353 MIR122-201ENST00000385044 85 ntBASIC2.98□□□□□ -1.93
RIPK2O43353 RAP1BP1-201ENST00000412709 553 ntBASIC2.98□□□□□ -1.93
RIPK2O43353 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
RIPK2O43353 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms