Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 RPL7P60-201ENST00000397636 735 ntBASIC4.83□□□□□ -1.64
RFXAPO00287 AL356095.1-201ENST00000417217 199 ntBASIC4.83□□□□□ -1.64
RFXAPO00287 E2F6P2-201ENST00000420708 748 ntBASIC4.83□□□□□ -1.64
RFXAPO00287 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.83□□□□□ -1.64
RFXAPO00287 AC233981.1-201ENST00000423224 461 ntBASIC4.83□□□□□ -1.64
RFXAPO00287 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.83□□□□□ -1.64
RFXAPO00287 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC4.83□□□□□ -1.64
RFXAPO00287 RPL23AP83-201ENST00000434984 473 ntBASIC4.83□□□□□ -1.64
RFXAPO00287 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.83□□□□□ -1.64
RFXAPO00287 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC4.83□□□□□ -1.64
RFXAPO00287 AL035666.1-201ENST00000446195 348 ntBASIC4.83□□□□□ -1.64
RFXAPO00287 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RFXAPO00287 RPS29P15-201ENST00000458329 171 ntBASIC4.83□□□□□ -1.64
RFXAPO00287 RPL7L1P8-201ENST00000469911 741 ntBASIC4.83□□□□□ -1.64
RFXAPO00287 TRBVA-201ENST00000498804 316 ntBASIC4.83□□□□□ -1.64
RFXAPO00287 AC146944.2-203ENST00000502493 354 ntBASIC4.83□□□□□ -1.64
RFXAPO00287 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.83□□□□□ -1.64
RFXAPO00287 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RFXAPO00287 AC139495.1-202ENST00000513164 354 ntBASIC4.83□□□□□ -1.64
RFXAPO00287 SNORD27.1-201ENST00000516319 72 ntBASIC4.83□□□□□ -1.64
RFXAPO00287 SCARNA13-201ENST00000516672 275 ntBASIC4.83□□□□□ -1.64
RFXAPO00287 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.83□□□□□ -1.64
RFXAPO00287 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.83□□□□□ -1.64
RFXAPO00287 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.83□□□□□ -1.64
RFXAPO00287 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.83□□□□□ -1.64
RFXAPO00287 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
RFXAPO00287 MIR5583-1-201ENST00000580941 59 ntBASIC4.83□□□□□ -1.64
RFXAPO00287 AF038458.1-201ENST00000588406 262 ntBASIC4.83□□□□□ -1.64
RFXAPO00287 BNIP3P25-201ENST00000596023 559 ntBASIC4.83□□□□□ -1.64
RFXAPO00287 CYP2C61P-201ENST00000604072 290 ntBASIC4.83□□□□□ -1.64
RFXAPO00287 AL161756.2-201ENST00000604597 246 ntBASIC4.83□□□□□ -1.64
RFXAPO00287 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.83□□□□□ -1.64
RFXAPO00287 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.83□□□□□ -1.64
RFXAPO00287 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
RFXAPO00287 AC025125.1-201ENST00000624743 1922 ntBASIC4.83□□□□□ -1.64
RFXAPO00287 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RFXAPO00287 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
RFXAPO00287 TAB3P1-202ENST00000452645 1634 ntBASIC4.83□□□□□ -1.64
RFXAPO00287 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.83□□□□□ -1.64
RFXAPO00287 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.82□□□□□ -1.64
RFXAPO00287 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.82□□□□□ -1.64
RFXAPO00287 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
RFXAPO00287 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
RFXAPO00287 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
RFXAPO00287 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RFXAPO00287 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
RFXAPO00287 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
RFXAPO00287 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.82□□□□□ -1.64
RFXAPO00287 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RFXAPO00287 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RFXAPO00287 Y_RNA.22-201ENST00000362492 102 ntBASIC4.82□□□□□ -1.64
RFXAPO00287 RNU1-35P-201ENST00000362782 153 ntBASIC4.82□□□□□ -1.64
RFXAPO00287 Y_RNA.153-201ENST00000363615 91 ntBASIC4.82□□□□□ -1.64
RFXAPO00287 U3.12-201ENST00000364498 214 ntBASIC4.82□□□□□ -1.64
RFXAPO00287 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.82□□□□□ -1.64
RFXAPO00287 RNU6-1032P-201ENST00000384100 107 ntBASIC4.82□□□□□ -1.64
RFXAPO00287 Y_RNA.512-201ENST00000384518 102 ntBASIC4.82□□□□□ -1.64
RFXAPO00287 SSXP10-201ENST00000402595 565 ntBASIC4.82□□□□□ -1.64
RFXAPO00287 RN7SKP16-201ENST00000410180 299 ntBASIC4.82□□□□□ -1.64
RFXAPO00287 EIF4A1P3-201ENST00000411521 244 ntBASIC4.82□□□□□ -1.64
RFXAPO00287 RPL37P10-201ENST00000412884 288 ntBASIC4.82□□□□□ -1.64
RFXAPO00287 CRYBB2P1-203ENST00000415709 538 ntBASIC4.82□□□□□ -1.64
RFXAPO00287 OR4K11P-201ENST00000431829 904 ntBASIC4.82□□□□□ -1.64
RFXAPO00287 RPL37P1-201ENST00000432310 284 ntBASIC4.82□□□□□ -1.64
RFXAPO00287 AC005019.1-201ENST00000436455 431 ntBASIC4.82□□□□□ -1.64
RFXAPO00287 RPS24P13-201ENST00000442520 397 ntBASIC4.82□□□□□ -1.64
RFXAPO00287 AL162151.2-201ENST00000448875 158 ntBASIC4.82□□□□□ -1.64
RFXAPO00287 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC4.82□□□□□ -1.64
RFXAPO00287 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.82□□□□□ -1.64
RFXAPO00287 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.82□□□□□ -1.64
RFXAPO00287 AC245028.2-201ENST00000458673 253 ntBASIC4.82□□□□□ -1.64
RFXAPO00287 Y_RNA.653-201ENST00000459091 95 ntBASIC4.82□□□□□ -1.64
RFXAPO00287 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.82□□□□□ -1.64
RFXAPO00287 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.82□□□□□ -1.64
RFXAPO00287 AC092436.1-201ENST00000506450 503 ntBASIC4.82□□□□□ -1.64
RFXAPO00287 RN7SKP24-201ENST00000515888 284 ntBASIC4.82□□□□□ -1.64
RFXAPO00287 RN7SKP219-201ENST00000516825 296 ntBASIC4.82□□□□□ -1.64
RFXAPO00287 IGKV2-36-201ENST00000519999 223 ntBASIC4.82□□□□□ -1.64
RFXAPO00287 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.82□□□□□ -1.64
RFXAPO00287 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.82□□□□□ -1.64
RFXAPO00287 OR4K8P-201ENST00000578842 1048 ntBASIC4.82□□□□□ -1.64
RFXAPO00287 MIR4286-201ENST00000580651 93 ntBASIC4.82□□□□□ -1.64
RFXAPO00287 AC005357.1-201ENST00000588399 301 ntBASIC4.82□□□□□ -1.64
RFXAPO00287 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.82□□□□□ -1.64
RFXAPO00287 AC069200.1-201ENST00000609511 323 ntBASIC4.82□□□□□ -1.64
RFXAPO00287 AL390240.1-201ENST00000612950 384 ntBASIC4.82□□□□□ -1.64
RFXAPO00287 uc_338.11-201ENST00000619132 160 ntBASIC4.82□□□□□ -1.64
RFXAPO00287 AL162373.1-201ENST00000620433 407 ntBASIC4.82□□□□□ -1.64
RFXAPO00287 AC078938.1-201ENST00000620993 318 ntBASIC4.82□□□□□ -1.64
RFXAPO00287 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RFXAPO00287 EIF2AP4-201ENST00000424793 1781 ntBASIC4.82□□□□□ -1.64
RFXAPO00287 THAP12P5-201ENST00000405864 2275 ntBASIC4.82□□□□□ -1.64
RFXAPO00287 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
RFXAPO00287 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
RFXAPO00287 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.82□□□□□ -1.64
RFXAPO00287 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RFXAPO00287 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RFXAPO00287 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
RFXAPO00287 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RFXAPO00287 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms