Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AC090281.1-201ENST00000523019 276 ntBASIC4.03□□□□□ -1.76
CCDC187A0A096LP49 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC187A0A096LP49 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC187A0A096LP49 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC187A0A096LP49 AP000907.2-201ENST00000530827 353 ntBASIC4.03□□□□□ -1.76
CCDC187A0A096LP49 OR5AL2P-201ENST00000532185 920 ntBASIC4.03□□□□□ -1.76
CCDC187A0A096LP49 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC187A0A096LP49 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC187A0A096LP49 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC187A0A096LP49 AL356432.3-201ENST00000568952 465 ntBASIC4.03□□□□□ -1.76
CCDC187A0A096LP49 AL391840.1-201ENST00000571144 367 ntBASIC4.03□□□□□ -1.76
CCDC187A0A096LP49 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC187A0A096LP49 AC060771.1-201ENST00000582031 164 ntBASIC4.03□□□□□ -1.76
CCDC187A0A096LP49 BNIP3P9-201ENST00000603714 553 ntBASIC4.03□□□□□ -1.76
CCDC187A0A096LP49 AL160290.3-201ENST00000604869 165 ntBASIC4.03□□□□□ -1.76
CCDC187A0A096LP49 HMGN2P28-201ENST00000606102 262 ntBASIC4.03□□□□□ -1.76
CCDC187A0A096LP49 AC136475.10-201ENST00000620253 385 ntBASIC4.03□□□□□ -1.76
CCDC187A0A096LP49 AC002550.2-201ENST00000621246 394 ntBASIC4.03□□□□□ -1.76
CCDC187A0A096LP49 AC112200.1-201ENST00000625015 234 ntBASIC4.03□□□□□ -1.76
CCDC187A0A096LP49 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
CCDC187A0A096LP49 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC187A0A096LP49 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.03□□□□□ -1.77
CCDC187A0A096LP49 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.03□□□□□ -1.77
CCDC187A0A096LP49 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.03□□□□□ -1.77
CCDC187A0A096LP49 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 AL133412.1-201ENST00000380194 2992 ntBASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 AL161912.2-201ENST00000565707 3007 ntBASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 CBX3P1-201ENST00000325243 554 ntBASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 Y_RNA.38-201ENST00000362617 102 ntBASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 RNA5SP502-201ENST00000362694 119 ntBASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 RNU6-263P-201ENST00000363811 107 ntBASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 RNU4-12P-201ENST00000365233 139 ntBASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 Y_RNA.535-201ENST00000384612 99 ntBASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 BX295541.1-201ENST00000417774 250 ntBASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 ISCA1P6-201ENST00000427740 390 ntBASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 MRPS18BP2-201ENST00000434310 759 ntBASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 HMGB3P30-201ENST00000457863 606 ntBASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 AC092989.1-201ENST00000481235 277 ntBASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 AL139099.1-201ENST00000497398 403 ntBASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 AC008628.2-201ENST00000502605 298 ntBASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 RNA5SP446-201ENST00000515955 82 ntBASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 AC068790.3-201ENST00000602988 553 ntBASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 AC008739.3-201ENST00000603262 127 ntBASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 AC245014.2-201ENST00000603689 287 ntBASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 AC246785.4-201ENST00000605374 287 ntBASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 AC055876.5-201ENST00000605667 259 ntBASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 AL355472.4-201ENST00000610233 626 ntBASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 AC005086.4-201ENST00000623065 213 ntBASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC187A0A096LP49 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
CCDC187A0A096LP49 NOL8P1-201ENST00000508336 3529 ntBASIC4.01□□□□□ -1.77
CCDC187A0A096LP49 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC187A0A096LP49 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
CCDC187A0A096LP49 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC187A0A096LP49 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC187A0A096LP49 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC187A0A096LP49 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
CCDC187A0A096LP49 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC187A0A096LP49 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC187A0A096LP49 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CCDC187A0A096LP49 RN7SKP44-201ENST00000363602 316 ntBASIC4.01□□□□□ -1.77
CCDC187A0A096LP49 Y_RNA.296-201ENST00000364930 108 ntBASIC4.01□□□□□ -1.77
CCDC187A0A096LP49 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
CCDC187A0A096LP49 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC187A0A096LP49 Y_RNA.548-201ENST00000384656 105 ntBASIC4.01□□□□□ -1.77
CCDC187A0A096LP49 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC187A0A096LP49 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC187A0A096LP49 CCNG1P1-201ENST00000406783 885 ntBASIC4.01□□□□□ -1.77
CCDC187A0A096LP49 RNA5SP44-201ENST00000410446 133 ntBASIC4.01□□□□□ -1.77
CCDC187A0A096LP49 RNU4-78P-201ENST00000410940 126 ntBASIC4.01□□□□□ -1.77
CCDC187A0A096LP49 RNU6-195P-201ENST00000411352 109 ntBASIC4.01□□□□□ -1.77
CCDC187A0A096LP49 USP9YP20-201ENST00000419224 558 ntBASIC4.01□□□□□ -1.77
CCDC187A0A096LP49 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms