Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.87□□□□□ -2.11
TRAV27A0A087WT01 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.87□□□□□ -2.11
TRAV27A0A087WT01 SNRPGP18-201ENST00000553000 214 ntBASIC1.87□□□□□ -2.11
TRAV27A0A087WT01 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.87□□□□□ -2.11
TRAV27A0A087WT01 ISCA1P3-201ENST00000577104 373 ntBASIC1.87□□□□□ -2.11
TRAV27A0A087WT01 MIR4672-201ENST00000583126 81 ntBASIC1.87□□□□□ -2.11
TRAV27A0A087WT01 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.87□□□□□ -2.11
TRAV27A0A087WT01 VN1R78P-201ENST00000597393 564 ntBASIC1.87□□□□□ -2.11
TRAV27A0A087WT01 AL136363.1-201ENST00000605349 337 ntBASIC1.87□□□□□ -2.11
TRAV27A0A087WT01 AC073111.2-201ENST00000605657 1075 ntBASIC1.87□□□□□ -2.11
TRAV27A0A087WT01 AL450472.3-201ENST00000615578 367 ntBASIC1.87□□□□□ -2.11
TRAV27A0A087WT01 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TRAV27A0A087WT01 AC024023.1-201ENST00000624530 922 ntBASIC1.87□□□□□ -2.11
TRAV27A0A087WT01 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC1.87□□□□□ -2.11
TRAV27A0A087WT01 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC1.87□□□□□ -2.11
TRAV27A0A087WT01 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC1.86□□□□□ -2.11
TRAV27A0A087WT01 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
TRAV27A0A087WT01 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
TRAV27A0A087WT01 AL512646.1-201ENST00000269395 1077 ntBASIC1.86□□□□□ -2.11
TRAV27A0A087WT01 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
TRAV27A0A087WT01 RNA5SP138-201ENST00000365098 114 ntBASIC1.86□□□□□ -2.11
TRAV27A0A087WT01 Y_RNA.510-201ENST00000384511 114 ntBASIC1.86□□□□□ -2.11
TRAV27A0A087WT01 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
TRAV27A0A087WT01 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
TRAV27A0A087WT01 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
TRAV27A0A087WT01 AL356320.2-201ENST00000417263 507 ntBASIC1.86□□□□□ -2.11
TRAV27A0A087WT01 MORF4L1P7-201ENST00000426038 703 ntBASIC1.86□□□□□ -2.11
TRAV27A0A087WT01 AC079780.1-201ENST00000428259 207 ntBASIC1.86□□□□□ -2.11
TRAV27A0A087WT01 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
TRAV27A0A087WT01 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.86□□□□□ -2.11
TRAV27A0A087WT01 MRPL35P4-201ENST00000453682 566 ntBASIC1.86□□□□□ -2.11
TRAV27A0A087WT01 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.86□□□□□ -2.11
TRAV27A0A087WT01 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.86□□□□□ -2.11
TRAV27A0A087WT01 MRPL42P6-201ENST00000486397 371 ntBASIC1.86□□□□□ -2.11
TRAV27A0A087WT01 HMGB1P47-201ENST00000511281 589 ntBASIC1.86□□□□□ -2.11
TRAV27A0A087WT01 IGLV3-17-201ENST00000519099 244 ntBASIC1.86□□□□□ -2.11
TRAV27A0A087WT01 AC087272.1-201ENST00000523624 533 ntBASIC1.86□□□□□ -2.11
TRAV27A0A087WT01 AC087276.1-201ENST00000529659 480 ntBASIC1.86□□□□□ -2.11
TRAV27A0A087WT01 AP001317.1-201ENST00000531194 960 ntBASIC1.86□□□□□ -2.11
TRAV27A0A087WT01 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.86□□□□□ -2.11
TRAV27A0A087WT01 AC007115.1-201ENST00000546853 234 ntBASIC1.86□□□□□ -2.11
TRAV27A0A087WT01 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
TRAV27A0A087WT01 AC090666.1-201ENST00000578241 445 ntBASIC1.86□□□□□ -2.11
TRAV27A0A087WT01 MIR5694-201ENST00000581190 76 ntBASIC1.86□□□□□ -2.11
TRAV27A0A087WT01 AP001330.4-201ENST00000604350 154 ntBASIC1.86□□□□□ -2.11
TRAV27A0A087WT01 HSPE1P7-201ENST00000604681 321 ntBASIC1.86□□□□□ -2.11
TRAV27A0A087WT01 AC068880.5-201ENST00000624331 290 ntBASIC1.86□□□□□ -2.11
TRAV27A0A087WT01 AC097372.4-201ENST00000625025 466 ntBASIC1.86□□□□□ -2.11
TRAV27A0A087WT01 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.86□□□□□ -2.11
TRAV27A0A087WT01 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.86□□□□□ -2.11
TRAV27A0A087WT01 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.86□□□□□ -2.11
TRAV27A0A087WT01 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC1.85□□□□□ -2.11
TRAV27A0A087WT01 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
TRAV27A0A087WT01 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
TRAV27A0A087WT01 RNU6-989P-201ENST00000362756 107 ntBASIC1.85□□□□□ -2.11
TRAV27A0A087WT01 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC1.85□□□□□ -2.11
TRAV27A0A087WT01 SNORA51.11-201ENST00000384442 131 ntBASIC1.85□□□□□ -2.11
TRAV27A0A087WT01 RNU6-1072P-201ENST00000384703 107 ntBASIC1.85□□□□□ -2.11
TRAV27A0A087WT01 RNU6-443P-201ENST00000384780 107 ntBASIC1.85□□□□□ -2.11
TRAV27A0A087WT01 AL023284.1-201ENST00000403956 276 ntBASIC1.85□□□□□ -2.11
TRAV27A0A087WT01 RNU6-564P-201ENST00000410983 104 ntBASIC1.85□□□□□ -2.11
TRAV27A0A087WT01 AL139156.1-201ENST00000412785 841 ntBASIC1.85□□□□□ -2.11
TRAV27A0A087WT01 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.85□□□□□ -2.11
TRAV27A0A087WT01 Z75741.2-201ENST00000417272 1167 ntBASIC1.85□□□□□ -2.11
TRAV27A0A087WT01 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC1.85□□□□□ -2.11
TRAV27A0A087WT01 AC027124.2-201ENST00000428249 105 ntBASIC1.85□□□□□ -2.11
TRAV27A0A087WT01 AL590762.3-201ENST00000436372 640 ntBASIC1.85□□□□□ -2.11
TRAV27A0A087WT01 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC1.85□□□□□ -2.11
TRAV27A0A087WT01 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.85□□□□□ -2.11
TRAV27A0A087WT01 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.85□□□□□ -2.11
TRAV27A0A087WT01 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC1.85□□□□□ -2.11
TRAV27A0A087WT01 SNRPGP6-201ENST00000451124 220 ntBASIC1.85□□□□□ -2.11
TRAV27A0A087WT01 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.85□□□□□ -2.11
TRAV27A0A087WT01 MTCO3P11-201ENST00000455103 774 ntBASIC1.85□□□□□ -2.11
TRAV27A0A087WT01 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
TRAV27A0A087WT01 RNF138P1-201ENST00000502765 546 ntBASIC1.85□□□□□ -2.11
TRAV27A0A087WT01 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.85□□□□□ -2.11
TRAV27A0A087WT01 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
TRAV27A0A087WT01 AC093770.1-201ENST00000511559 571 ntBASIC1.85□□□□□ -2.11
TRAV27A0A087WT01 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.85□□□□□ -2.11
TRAV27A0A087WT01 OR5BM1P-201ENST00000512021 366 ntBASIC1.85□□□□□ -2.11
TRAV27A0A087WT01 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC1.85□□□□□ -2.11
TRAV27A0A087WT01 AP000867.2-201ENST00000532468 320 ntBASIC1.85□□□□□ -2.11
TRAV27A0A087WT01 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.85□□□□□ -2.11
TRAV27A0A087WT01 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.85□□□□□ -2.11
TRAV27A0A087WT01 AC026464.5-201ENST00000562497 722 ntBASIC1.85□□□□□ -2.11
TRAV27A0A087WT01 AC106734.1-201ENST00000568646 663 ntBASIC1.85□□□□□ -2.11
TRAV27A0A087WT01 RPS3AP23-202ENST00000574601 686 ntBASIC1.85□□□□□ -2.11
TRAV27A0A087WT01 CR589904.2-201ENST00000612533 440 ntBASIC1.85□□□□□ -2.11
TRAV27A0A087WT01 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.85□□□□□ -2.11
TRAV27A0A087WT01 MTND4P1-201ENST00000457501 1466 ntBASIC1.85□□□□□ -2.11
TRAV27A0A087WT01 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
TRAV27A0A087WT01 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
TRAV27A0A087WT01 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
TRAV27A0A087WT01 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
TRAV27A0A087WT01 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.84□□□□□ -2.11
TRAV27A0A087WT01 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
TRAV27A0A087WT01 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
TRAV27A0A087WT01 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
TRAV27A0A087WT01 RNU6-1249P-201ENST00000363237 111 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms