Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PCDHAC2Q9Y5I4 DEFB131E-202ENST00000602581 683 ntBASIC3.9□□□□□ -1.79
PCDHAC2Q9Y5I4 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.9□□□□□ -1.79
PCDHAC2Q9Y5I4 AC078795.2-201ENST00000602835 1252 ntBASIC3.9□□□□□ -1.79
PCDHAC2Q9Y5I4 AC083899.3-201ENST00000603413 594 ntBASIC3.9□□□□□ -1.79
PCDHAC2Q9Y5I4 AC080078.2-201ENST00000603766 501 ntBASIC3.9□□□□□ -1.79
PCDHAC2Q9Y5I4 AL031775.1-201ENST00000607014 887 ntBASIC3.9□□□□□ -1.79
PCDHAC2Q9Y5I4 AP000254.1-201ENST00000609934 520 ntBASIC3.9□□□□□ -1.79
PCDHAC2Q9Y5I4 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.9□□□□□ -1.79
PCDHAC2Q9Y5I4 AC009878.1-201ENST00000621819 340 ntBASIC3.9□□□□□ -1.79
PCDHAC2Q9Y5I4 AC231657.1-201ENST00000624313 397 ntBASIC3.9□□□□□ -1.79
PCDHAC2Q9Y5I4 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.9□□□□□ -1.79
PCDHAC2Q9Y5I4 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.9□□□□□ -1.79
PCDHAC2Q9Y5I4 AC099063.3-201ENST00000642066 185 ntBASIC3.9□□□□□ -1.79
PCDHAC2Q9Y5I4 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PCDHAC2Q9Y5I4 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PCDHAC2Q9Y5I4 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.9□□□□□ -1.79
PCDHAC2Q9Y5I4 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PCDHAC2Q9Y5I4 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PCDHAC2Q9Y5I4 MTCO1P14-201ENST00000441695 1559 ntBASIC3.89□□□□□ -1.79
PCDHAC2Q9Y5I4 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
PCDHAC2Q9Y5I4 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PCDHAC2Q9Y5I4 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PCDHAC2Q9Y5I4 AL356473.1-201ENST00000406203 1408 ntBASIC3.89□□□□□ -1.79
PCDHAC2Q9Y5I4 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.89□□□□□ -1.79
PCDHAC2Q9Y5I4 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PCDHAC2Q9Y5I4 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PCDHAC2Q9Y5I4 RNU6-660P-201ENST00000364566 109 ntBASIC3.89□□□□□ -1.79
PCDHAC2Q9Y5I4 OR5H15-201ENST00000383696 930 ntBASIC3.89□□□□□ -1.79
PCDHAC2Q9Y5I4 RNU6-921P-201ENST00000384361 107 ntBASIC3.89□□□□□ -1.79
PCDHAC2Q9Y5I4 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PCDHAC2Q9Y5I4 AL138878.1-201ENST00000405131 347 ntBASIC3.89□□□□□ -1.79
PCDHAC2Q9Y5I4 MIR1183-201ENST00000408856 89 ntBASIC3.89□□□□□ -1.79
PCDHAC2Q9Y5I4 Y_RNA.619-201ENST00000410951 90 ntBASIC3.89□□□□□ -1.79
PCDHAC2Q9Y5I4 AC069218.2-201ENST00000411665 344 ntBASIC3.89□□□□□ -1.79
PCDHAC2Q9Y5I4 RPS15AP38-201ENST00000413110 372 ntBASIC3.89□□□□□ -1.79
PCDHAC2Q9Y5I4 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.89□□□□□ -1.79
PCDHAC2Q9Y5I4 NUP35P2-201ENST00000416748 943 ntBASIC3.89□□□□□ -1.79
PCDHAC2Q9Y5I4 CYCSP46-201ENST00000423569 204 ntBASIC3.89□□□□□ -1.79
PCDHAC2Q9Y5I4 RPL30P3-201ENST00000424262 333 ntBASIC3.89□□□□□ -1.79
PCDHAC2Q9Y5I4 RPL35AP12-201ENST00000425362 338 ntBASIC3.89□□□□□ -1.79
PCDHAC2Q9Y5I4 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.89□□□□□ -1.79
PCDHAC2Q9Y5I4 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.89□□□□□ -1.79
PCDHAC2Q9Y5I4 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.89□□□□□ -1.79
PCDHAC2Q9Y5I4 AC092427.1-201ENST00000439177 601 ntBASIC3.89□□□□□ -1.79
PCDHAC2Q9Y5I4 RPS26P56-201ENST00000444468 240 ntBASIC3.89□□□□□ -1.79
PCDHAC2Q9Y5I4 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.89□□□□□ -1.79
PCDHAC2Q9Y5I4 MTCO3P11-201ENST00000455103 774 ntBASIC3.89□□□□□ -1.79
PCDHAC2Q9Y5I4 SNRPGP5-201ENST00000456003 220 ntBASIC3.89□□□□□ -1.79
PCDHAC2Q9Y5I4 CBX3P3-201ENST00000508108 532 ntBASIC3.89□□□□□ -1.79
PCDHAC2Q9Y5I4 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
PCDHAC2Q9Y5I4 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.89□□□□□ -1.79
PCDHAC2Q9Y5I4 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.89□□□□□ -1.79
PCDHAC2Q9Y5I4 AP000790.1-201ENST00000528891 737 ntBASIC3.89□□□□□ -1.79
PCDHAC2Q9Y5I4 AC074029.1-201ENST00000552531 1044 ntBASIC3.89□□□□□ -1.79
PCDHAC2Q9Y5I4 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.89□□□□□ -1.79
PCDHAC2Q9Y5I4 AL356321.1-201ENST00000621360 228 ntBASIC3.89□□□□□ -1.79
PCDHAC2Q9Y5I4 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.89□□□□□ -1.79
PCDHAC2Q9Y5I4 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.89□□□□□ -1.79
PCDHAC2Q9Y5I4 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PCDHAC2Q9Y5I4 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.89□□□□□ -1.79
PCDHAC2Q9Y5I4 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PCDHAC2Q9Y5I4 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
PCDHAC2Q9Y5I4 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
PCDHAC2Q9Y5I4 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.88□□□□□ -1.79
PCDHAC2Q9Y5I4 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.88□□□□□ -1.79
PCDHAC2Q9Y5I4 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
PCDHAC2Q9Y5I4 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
PCDHAC2Q9Y5I4 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
PCDHAC2Q9Y5I4 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PCDHAC2Q9Y5I4 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
PCDHAC2Q9Y5I4 Y_RNA.18-201ENST00000362461 102 ntBASIC3.88□□□□□ -1.79
PCDHAC2Q9Y5I4 RNU6-374P-201ENST00000364146 108 ntBASIC3.88□□□□□ -1.79
PCDHAC2Q9Y5I4 SNORA54-201ENST00000384281 123 ntBASIC3.88□□□□□ -1.79
PCDHAC2Q9Y5I4 DEFB108C-201ENST00000400154 252 ntBASIC3.88□□□□□ -1.79
PCDHAC2Q9Y5I4 AL355379.1-201ENST00000405542 640 ntBASIC3.88□□□□□ -1.79
PCDHAC2Q9Y5I4 AL023807.1-201ENST00000407932 359 ntBASIC3.88□□□□□ -1.79
PCDHAC2Q9Y5I4 RN7SKP142-201ENST00000411236 328 ntBASIC3.88□□□□□ -1.79
PCDHAC2Q9Y5I4 AC073264.1-201ENST00000411508 416 ntBASIC3.88□□□□□ -1.79
PCDHAC2Q9Y5I4 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PCDHAC2Q9Y5I4 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PCDHAC2Q9Y5I4 Z99497.1-201ENST00000421282 135 ntBASIC3.88□□□□□ -1.79
PCDHAC2Q9Y5I4 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.88□□□□□ -1.79
PCDHAC2Q9Y5I4 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.88□□□□□ -1.79
PCDHAC2Q9Y5I4 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.88□□□□□ -1.79
PCDHAC2Q9Y5I4 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.88□□□□□ -1.79
PCDHAC2Q9Y5I4 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.88□□□□□ -1.79
PCDHAC2Q9Y5I4 VN1R10P-201ENST00000447106 875 ntBASIC3.88□□□□□ -1.79
PCDHAC2Q9Y5I4 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.88□□□□□ -1.79
PCDHAC2Q9Y5I4 SLC31A1P1-201ENST00000451221 567 ntBASIC3.88□□□□□ -1.79
PCDHAC2Q9Y5I4 RPL18AP17-201ENST00000455326 198 ntBASIC3.88□□□□□ -1.79
PCDHAC2Q9Y5I4 MTCO3P2-201ENST00000457365 171 ntBASIC3.88□□□□□ -1.79
PCDHAC2Q9Y5I4 ARPC3P2-201ENST00000457786 533 ntBASIC3.88□□□□□ -1.79
PCDHAC2Q9Y5I4 RPL30P9-201ENST00000465586 330 ntBASIC3.88□□□□□ -1.79
PCDHAC2Q9Y5I4 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.88□□□□□ -1.79
PCDHAC2Q9Y5I4 AC072039.1-201ENST00000477611 581 ntBASIC3.88□□□□□ -1.79
PCDHAC2Q9Y5I4 KLRA1P-201ENST00000503499 986 ntBASIC3.88□□□□□ -1.79
PCDHAC2Q9Y5I4 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.88□□□□□ -1.79
PCDHAC2Q9Y5I4 AC097462.2-201ENST00000504623 481 ntBASIC3.88□□□□□ -1.79
PCDHAC2Q9Y5I4 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms