Protein–RNA interactions for Protein: Q9Y2U8

LEMD3, Inner nuclear membrane protein Man1, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3Q9Y2U8 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
LEMD3Q9Y2U8 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC5.6□□□□□ -1.51
LEMD3Q9Y2U8 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LEMD3Q9Y2U8 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LEMD3Q9Y2U8 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LEMD3Q9Y2U8 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LEMD3Q9Y2U8 AL731566.1-201ENST00000620490 1937 ntBASIC5.59□□□□□ -1.51
LEMD3Q9Y2U8 RNU6-379P-201ENST00000363813 104 ntBASIC5.59□□□□□ -1.51
LEMD3Q9Y2U8 AC078974.1-201ENST00000411597 223 ntBASIC5.59□□□□□ -1.51
LEMD3Q9Y2U8 MTCYBP10-201ENST00000424905 650 ntBASIC5.59□□□□□ -1.51
LEMD3Q9Y2U8 AL353777.1-201ENST00000425552 326 ntBASIC5.59□□□□□ -1.51
LEMD3Q9Y2U8 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.59□□□□□ -1.51
LEMD3Q9Y2U8 ERLEC1P1-201ENST00000433806 578 ntBASIC5.59□□□□□ -1.51
LEMD3Q9Y2U8 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC5.59□□□□□ -1.51
LEMD3Q9Y2U8 RPS3AP54-201ENST00000435535 734 ntBASIC5.59□□□□□ -1.51
LEMD3Q9Y2U8 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC5.59□□□□□ -1.51
LEMD3Q9Y2U8 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC5.59□□□□□ -1.51
LEMD3Q9Y2U8 AC104073.1-201ENST00000451988 151 ntBASIC5.59□□□□□ -1.51
LEMD3Q9Y2U8 RN7SL41P-201ENST00000476144 297 ntBASIC5.59□□□□□ -1.51
LEMD3Q9Y2U8 AL163973.1-201ENST00000484753 577 ntBASIC5.59□□□□□ -1.51
LEMD3Q9Y2U8 MTCO1P29-201ENST00000496868 288 ntBASIC5.59□□□□□ -1.51
LEMD3Q9Y2U8 HMGB1P21-201ENST00000502313 581 ntBASIC5.59□□□□□ -1.51
LEMD3Q9Y2U8 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.59□□□□□ -1.51
LEMD3Q9Y2U8 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC5.59□□□□□ -1.51
LEMD3Q9Y2U8 Y_RNA.665-201ENST00000516177 98 ntBASIC5.59□□□□□ -1.51
LEMD3Q9Y2U8 RN7SKP295-201ENST00000517264 153 ntBASIC5.59□□□□□ -1.51
LEMD3Q9Y2U8 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LEMD3Q9Y2U8 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC5.59□□□□□ -1.51
LEMD3Q9Y2U8 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LEMD3Q9Y2U8 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC5.59□□□□□ -1.51
LEMD3Q9Y2U8 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LEMD3Q9Y2U8 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC5.59□□□□□ -1.51
LEMD3Q9Y2U8 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.59□□□□□ -1.51
LEMD3Q9Y2U8 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LEMD3Q9Y2U8 AC091953.2-201ENST00000623979 160 ntBASIC5.59□□□□□ -1.51
LEMD3Q9Y2U8 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LEMD3Q9Y2U8 AC000374.1-201ENST00000434698 1745 ntBASIC5.59□□□□□ -1.51
LEMD3Q9Y2U8 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
LEMD3Q9Y2U8 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
LEMD3Q9Y2U8 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
LEMD3Q9Y2U8 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
LEMD3Q9Y2U8 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LEMD3Q9Y2U8 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.58□□□□□ -1.52
LEMD3Q9Y2U8 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.58□□□□□ -1.52
LEMD3Q9Y2U8 MFSD8-242ENST00000641690 4199 ntBASIC5.58□□□□□ -1.52
LEMD3Q9Y2U8 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
LEMD3Q9Y2U8 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LEMD3Q9Y2U8 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.58□□□□□ -1.52
LEMD3Q9Y2U8 RNU1-130P-201ENST00000363930 160 ntBASIC5.58□□□□□ -1.52
LEMD3Q9Y2U8 RNU6-996P-201ENST00000365438 107 ntBASIC5.58□□□□□ -1.52
LEMD3Q9Y2U8 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LEMD3Q9Y2U8 RNU6-952P-201ENST00000391164 108 ntBASIC5.58□□□□□ -1.52
LEMD3Q9Y2U8 AC016769.3-201ENST00000396562 315 ntBASIC5.58□□□□□ -1.52
LEMD3Q9Y2U8 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
LEMD3Q9Y2U8 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC5.58□□□□□ -1.52
LEMD3Q9Y2U8 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC5.58□□□□□ -1.52
LEMD3Q9Y2U8 PABPC1P3-201ENST00000469174 459 ntBASIC5.58□□□□□ -1.52
LEMD3Q9Y2U8 AC104563.1-201ENST00000476147 376 ntBASIC5.58□□□□□ -1.52
LEMD3Q9Y2U8 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC5.58□□□□□ -1.52
LEMD3Q9Y2U8 SNORD116-26-201ENST00000516006 96 ntBASIC5.58□□□□□ -1.52
LEMD3Q9Y2U8 HMGB1P41-201ENST00000520234 440 ntBASIC5.58□□□□□ -1.52
LEMD3Q9Y2U8 COX6CP8-201ENST00000522620 226 ntBASIC5.58□□□□□ -1.52
LEMD3Q9Y2U8 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.58□□□□□ -1.52
LEMD3Q9Y2U8 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.58□□□□□ -1.52
LEMD3Q9Y2U8 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC5.58□□□□□ -1.52
LEMD3Q9Y2U8 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC5.58□□□□□ -1.52
LEMD3Q9Y2U8 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LEMD3Q9Y2U8 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC5.58□□□□□ -1.52
LEMD3Q9Y2U8 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LEMD3Q9Y2U8 AL391684.1-202ENST00000641293 1636 ntBASIC5.58□□□□□ -1.52
LEMD3Q9Y2U8 AC008079.2-201ENST00000623543 20396 ntBASIC5.58□□□□□ -1.52
LEMD3Q9Y2U8 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
LEMD3Q9Y2U8 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LEMD3Q9Y2U8 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LEMD3Q9Y2U8 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
LEMD3Q9Y2U8 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LEMD3Q9Y2U8 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
LEMD3Q9Y2U8 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LEMD3Q9Y2U8 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LEMD3Q9Y2U8 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.57□□□□□ -1.52
LEMD3Q9Y2U8 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LEMD3Q9Y2U8 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LEMD3Q9Y2U8 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LEMD3Q9Y2U8 RNU1-35P-201ENST00000362782 153 ntBASIC5.57□□□□□ -1.52
LEMD3Q9Y2U8 Y_RNA.158-201ENST00000363651 101 ntBASIC5.57□□□□□ -1.52
LEMD3Q9Y2U8 RNA5SP479-201ENST00000364858 117 ntBASIC5.57□□□□□ -1.52
LEMD3Q9Y2U8 MIR514A2-201ENST00000385131 88 ntBASIC5.57□□□□□ -1.52
LEMD3Q9Y2U8 MIR514A3-201ENST00000385132 88 ntBASIC5.57□□□□□ -1.52
LEMD3Q9Y2U8 AL031679.1-201ENST00000400616 525 ntBASIC5.57□□□□□ -1.52
LEMD3Q9Y2U8 RNU6-370P-201ENST00000411008 104 ntBASIC5.57□□□□□ -1.52
LEMD3Q9Y2U8 GNG5P5-201ENST00000420444 220 ntBASIC5.57□□□□□ -1.52
LEMD3Q9Y2U8 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.57□□□□□ -1.52
LEMD3Q9Y2U8 AC011998.1-201ENST00000433403 117 ntBASIC5.57□□□□□ -1.52
LEMD3Q9Y2U8 GPR143P-201ENST00000434155 205 ntBASIC5.57□□□□□ -1.52
LEMD3Q9Y2U8 AC073415.1-201ENST00000449240 153 ntBASIC5.57□□□□□ -1.52
LEMD3Q9Y2U8 CYCSP34-201ENST00000458172 304 ntBASIC5.57□□□□□ -1.52
LEMD3Q9Y2U8 RN7SL98P-201ENST00000462271 300 ntBASIC5.57□□□□□ -1.52
LEMD3Q9Y2U8 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.57□□□□□ -1.52
LEMD3Q9Y2U8 AC090686.1-201ENST00000481577 749 ntBASIC5.57□□□□□ -1.52
LEMD3Q9Y2U8 FAM206BP-201ENST00000510179 541 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms