Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 AP003122.6-201ENST00000623831 495 ntBASIC3□□□□□ -1.93
FOXA2Q9Y261 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3□□□□□ -1.93
FOXA2Q9Y261 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3□□□□□ -1.93
FOXA2Q9Y261 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3□□□□□ -1.93
FOXA2Q9Y261 AC103988.1-201ENST00000566382 2177 ntBASIC3□□□□□ -1.93
FOXA2Q9Y261 AC092125.1-201ENST00000562568 1995 ntBASIC3□□□□□ -1.93
FOXA2Q9Y261 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
FOXA2Q9Y261 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
FOXA2Q9Y261 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
FOXA2Q9Y261 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
FOXA2Q9Y261 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
FOXA2Q9Y261 Y_RNA.302-201ENST00000364997 102 ntBASIC2.99□□□□□ -1.93
FOXA2Q9Y261 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
FOXA2Q9Y261 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.99□□□□□ -1.93
FOXA2Q9Y261 MIR30B-201ENST00000384850 88 ntBASIC2.99□□□□□ -1.93
FOXA2Q9Y261 SAR1AP2-201ENST00000392696 594 ntBASIC2.99□□□□□ -1.93
FOXA2Q9Y261 RPL32P23-201ENST00000397237 405 ntBASIC2.99□□□□□ -1.93
FOXA2Q9Y261 SNX10-203ENST00000409367 746 ntTSL 5 BASIC2.99□□□□□ -1.93
FOXA2Q9Y261 SNORA57.3-201ENST00000411095 141 ntBASIC2.99□□□□□ -1.93
FOXA2Q9Y261 AC098592.1-201ENST00000419352 333 ntBASIC2.99□□□□□ -1.93
FOXA2Q9Y261 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.99□□□□□ -1.93
FOXA2Q9Y261 AL139247.1-201ENST00000422768 325 ntBASIC2.99□□□□□ -1.93
FOXA2Q9Y261 MTCO2P17-201ENST00000424336 677 ntBASIC2.99□□□□□ -1.93
FOXA2Q9Y261 AC092017.2-201ENST00000427600 362 ntBASIC2.99□□□□□ -1.93
FOXA2Q9Y261 AL390023.1-201ENST00000428836 262 ntBASIC2.99□□□□□ -1.93
FOXA2Q9Y261 MTND1P20-201ENST00000430341 950 ntBASIC2.99□□□□□ -1.93
FOXA2Q9Y261 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.99□□□□□ -1.93
FOXA2Q9Y261 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC2.99□□□□□ -1.93
FOXA2Q9Y261 AC104978.1-201ENST00000449387 391 ntBASIC2.99□□□□□ -1.93
FOXA2Q9Y261 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.99□□□□□ -1.93
FOXA2Q9Y261 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC2.99□□□□□ -1.93
FOXA2Q9Y261 ATG12P2-201ENST00000456830 416 ntBASIC2.99□□□□□ -1.93
FOXA2Q9Y261 RNU6-420P-201ENST00000458780 107 ntBASIC2.99□□□□□ -1.93
FOXA2Q9Y261 RPS15AP36-201ENST00000492022 382 ntBASIC2.99□□□□□ -1.93
FOXA2Q9Y261 HSPE1P23-201ENST00000509838 286 ntBASIC2.99□□□□□ -1.93
FOXA2Q9Y261 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
FOXA2Q9Y261 MTND4LP31-201ENST00000514859 294 ntBASIC2.99□□□□□ -1.93
FOXA2Q9Y261 MTATP6P15-201ENST00000527233 835 ntBASIC2.99□□□□□ -1.93
FOXA2Q9Y261 AC023538.1-201ENST00000534576 736 ntBASIC2.99□□□□□ -1.93
FOXA2Q9Y261 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.99□□□□□ -1.93
FOXA2Q9Y261 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.99□□□□□ -1.93
FOXA2Q9Y261 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC2.99□□□□□ -1.93
FOXA2Q9Y261 ACTR3BP3-201ENST00000565577 979 ntBASIC2.99□□□□□ -1.93
FOXA2Q9Y261 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.99□□□□□ -1.93
FOXA2Q9Y261 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.99□□□□□ -1.93
FOXA2Q9Y261 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.99□□□□□ -1.93
FOXA2Q9Y261 AC005951.2-201ENST00000576282 495 ntBASIC2.99□□□□□ -1.93
FOXA2Q9Y261 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC2.99□□□□□ -1.93
FOXA2Q9Y261 GLUD1P4-201ENST00000590914 418 ntBASIC2.99□□□□□ -1.93
FOXA2Q9Y261 AC021171.1-201ENST00000603137 706 ntBASIC2.99□□□□□ -1.93
FOXA2Q9Y261 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
FOXA2Q9Y261 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.99□□□□□ -1.93
FOXA2Q9Y261 RNVU1-4-201ENST00000612985 164 ntBASIC2.99□□□□□ -1.93
FOXA2Q9Y261 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
FOXA2Q9Y261 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
FOXA2Q9Y261 AL031667.3-201ENST00000620124 655 ntBASIC2.99□□□□□ -1.93
FOXA2Q9Y261 AP000676.3-201ENST00000623299 569 ntBASIC2.99□□□□□ -1.93
FOXA2Q9Y261 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
FOXA2Q9Y261 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
FOXA2Q9Y261 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC2.99□□□□□ -1.93
FOXA2Q9Y261 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
FOXA2Q9Y261 MTND4P16-201ENST00000466108 1367 ntBASIC2.99□□□□□ -1.93
FOXA2Q9Y261 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.98□□□□□ -1.93
FOXA2Q9Y261 AC007785.2-201ENST00000598627 1916 ntBASIC2.98□□□□□ -1.93
FOXA2Q9Y261 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
FOXA2Q9Y261 RN7SKP280-201ENST00000364196 304 ntBASIC2.98□□□□□ -1.93
FOXA2Q9Y261 CD24P4-201ENST00000382840 243 ntBASIC2.98□□□□□ -1.93
FOXA2Q9Y261 EI24P2-201ENST00000397776 1076 ntBASIC2.98□□□□□ -1.93
FOXA2Q9Y261 AL445189.1-201ENST00000405722 338 ntBASIC2.98□□□□□ -1.93
FOXA2Q9Y261 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.98□□□□□ -1.93
FOXA2Q9Y261 AC010099.3-201ENST00000423896 409 ntBASIC2.98□□□□□ -1.93
FOXA2Q9Y261 AL445669.1-201ENST00000426743 755 ntBASIC2.98□□□□□ -1.93
FOXA2Q9Y261 AL591419.1-201ENST00000427423 339 ntBASIC2.98□□□□□ -1.93
FOXA2Q9Y261 RPL23AP82-202ENST00000427528 469 ntBASIC2.98□□□□□ -1.93
FOXA2Q9Y261 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.98□□□□□ -1.93
FOXA2Q9Y261 GOT2P5-201ENST00000433995 546 ntBASIC2.98□□□□□ -1.93
FOXA2Q9Y261 NDUFB1P1-201ENST00000435191 180 ntBASIC2.98□□□□□ -1.93
FOXA2Q9Y261 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.98□□□□□ -1.93
FOXA2Q9Y261 OR6C5P-201ENST00000452388 923 ntBASIC2.98□□□□□ -1.93
FOXA2Q9Y261 AC010099.1-201ENST00000455434 375 ntBASIC2.98□□□□□ -1.93
FOXA2Q9Y261 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.98□□□□□ -1.93
FOXA2Q9Y261 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
FOXA2Q9Y261 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
FOXA2Q9Y261 AC026784.1-201ENST00000507986 352 ntBASIC2.98□□□□□ -1.93
FOXA2Q9Y261 LTV1P1-201ENST00000510683 1237 ntBASIC2.98□□□□□ -1.93
FOXA2Q9Y261 RNA5SP291-201ENST00000517222 105 ntBASIC2.98□□□□□ -1.93
FOXA2Q9Y261 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
FOXA2Q9Y261 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.98□□□□□ -1.93
FOXA2Q9Y261 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
FOXA2Q9Y261 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.98□□□□□ -1.93
FOXA2Q9Y261 AC011602.1-201ENST00000546484 331 ntBASIC2.98□□□□□ -1.93
FOXA2Q9Y261 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
FOXA2Q9Y261 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.98□□□□□ -1.93
FOXA2Q9Y261 HMGB1P14-201ENST00000557424 591 ntBASIC2.98□□□□□ -1.93
FOXA2Q9Y261 IGKV2OR2-8-201ENST00000558710 300 ntBASIC2.98□□□□□ -1.93
FOXA2Q9Y261 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC2.98□□□□□ -1.93
FOXA2Q9Y261 AC087499.8-201ENST00000578406 226 ntBASIC2.98□□□□□ -1.93
FOXA2Q9Y261 MIR4738-201ENST00000579134 87 ntBASIC2.98□□□□□ -1.93
FOXA2Q9Y261 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC2.98□□□□□ -1.93
FOXA2Q9Y261 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms