Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
ZC3H4Q9UPT8 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ZC3H4Q9UPT8 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ZC3H4Q9UPT8 RNU6-874P-201ENST00000362390 105 ntBASIC6.3□□□□□ -1.4
ZC3H4Q9UPT8 Y_RNA.39-201ENST00000362620 98 ntBASIC6.3□□□□□ -1.4
ZC3H4Q9UPT8 Y_RNA.210-201ENST00000364161 110 ntBASIC6.3□□□□□ -1.4
ZC3H4Q9UPT8 Y_RNA.288-201ENST00000364854 92 ntBASIC6.3□□□□□ -1.4
ZC3H4Q9UPT8 RHOT1P2-201ENST00000366423 333 ntBASIC6.3□□□□□ -1.4
ZC3H4Q9UPT8 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
ZC3H4Q9UPT8 RN7SKP114-201ENST00000410327 279 ntBASIC6.3□□□□□ -1.4
ZC3H4Q9UPT8 EIF4A1P3-201ENST00000411521 244 ntBASIC6.3□□□□□ -1.4
ZC3H4Q9UPT8 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC6.3□□□□□ -1.4
ZC3H4Q9UPT8 RPL23AP38-201ENST00000423801 469 ntBASIC6.3□□□□□ -1.4
ZC3H4Q9UPT8 RPL7P37-201ENST00000425095 738 ntBASIC6.3□□□□□ -1.4
ZC3H4Q9UPT8 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC6.3□□□□□ -1.4
ZC3H4Q9UPT8 AC114801.2-201ENST00000503825 781 ntBASIC6.3□□□□□ -1.4
ZC3H4Q9UPT8 AC021146.3-201ENST00000511911 260 ntBASIC6.3□□□□□ -1.4
ZC3H4Q9UPT8 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC6.3□□□□□ -1.4
ZC3H4Q9UPT8 RNA5SP384-201ENST00000516615 116 ntBASIC6.3□□□□□ -1.4
ZC3H4Q9UPT8 AC105031.1-201ENST00000518550 476 ntBASIC6.3□□□□□ -1.4
ZC3H4Q9UPT8 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC6.3□□□□□ -1.4
ZC3H4Q9UPT8 APAF1-207ENST00000547743 651 ntTSL 3 BASIC6.3□□□□□ -1.4
ZC3H4Q9UPT8 MIR4277-201ENST00000578298 84 ntBASIC6.3□□□□□ -1.4
ZC3H4Q9UPT8 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC6.3□□□□□ -1.4
ZC3H4Q9UPT8 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.3□□□□□ -1.4
ZC3H4Q9UPT8 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC6.3□□□□□ -1.4
ZC3H4Q9UPT8 AL133481.2-203ENST00000607558 139 ntBASIC6.3□□□□□ -1.4
ZC3H4Q9UPT8 ALG13-230ENST00000623189 458 ntTSL 3 BASIC6.3□□□□□ -1.4
ZC3H4Q9UPT8 DDX18P3-201ENST00000404856 2007 ntBASIC6.3□□□□□ -1.4
ZC3H4Q9UPT8 AC020656.2-201ENST00000613291 5309 ntBASIC6.3□□□□□ -1.4
ZC3H4Q9UPT8 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
ZC3H4Q9UPT8 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ZC3H4Q9UPT8 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
ZC3H4Q9UPT8 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
ZC3H4Q9UPT8 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
ZC3H4Q9UPT8 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
ZC3H4Q9UPT8 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC6.3□□□□□ -1.4
ZC3H4Q9UPT8 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 SNORA16.2-201ENST00000390991 127 ntBASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 SNORA48.7-201ENST00000391302 135 ntBASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 MIR548I3-201ENST00000408378 149 ntBASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 MIR548I1-201ENST00000408810 149 ntBASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 RNU6ATAC34P-201ENST00000408879 121 ntBASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 AC096921.1-201ENST00000411661 375 ntBASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 CYP4F29P-201ENST00000420685 446 ntBASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 DYNLT3P2-201ENST00000442517 295 ntBASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 AC010326.1-201ENST00000462726 602 ntBASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 AC008571.1-201ENST00000467232 300 ntBASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 CREM-230ENST00000474931 626 ntTSL 2 BASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 AC090686.1-201ENST00000481577 749 ntBASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 AC009901.1-201ENST00000506703 541 ntBASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 SNORA70.11-201ENST00000515987 138 ntBASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 SNORA70.13-201ENST00000516116 138 ntBASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 RNA5SP43-201ENST00000516559 110 ntBASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 RNU6-1069P-201ENST00000516612 133 ntBASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 RNU6-307P-201ENST00000516743 106 ntBASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 RN7SKP82-201ENST00000516786 223 ntBASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 IGLVIV-53-201ENST00000520107 367 ntBASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 AC007375.1-201ENST00000554513 578 ntBASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 AL121576.1-201ENST00000556055 276 ntBASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 AL355297.3-201ENST00000604082 446 ntBASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 AL731532.1-201ENST00000623972 4236 ntBASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 AL122126.1-201ENST00000546905 1318 ntBASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
ZC3H4Q9UPT8 RNU6-946P-201ENST00000383878 107 ntBASIC6.28□□□□□ -1.4
ZC3H4Q9UPT8 RNU6-393P-201ENST00000384475 107 ntBASIC6.28□□□□□ -1.4
ZC3H4Q9UPT8 SNORA66-201ENST00000384792 133 ntBASIC6.28□□□□□ -1.4
ZC3H4Q9UPT8 RNU2-23P-201ENST00000410545 195 ntBASIC6.28□□□□□ -1.4
ZC3H4Q9UPT8 ELOCP19-201ENST00000411919 318 ntBASIC6.28□□□□□ -1.4
ZC3H4Q9UPT8 Z99755.1-201ENST00000414048 380 ntBASIC6.28□□□□□ -1.4
ZC3H4Q9UPT8 UBE2FP1-201ENST00000416536 447 ntBASIC6.28□□□□□ -1.4
ZC3H4Q9UPT8 BX510359.2-201ENST00000417920 305 ntBASIC6.28□□□□□ -1.4
ZC3H4Q9UPT8 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC6.28□□□□□ -1.4
ZC3H4Q9UPT8 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC6.28□□□□□ -1.4
ZC3H4Q9UPT8 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC6.28□□□□□ -1.4
ZC3H4Q9UPT8 ARL5AP4-201ENST00000430731 512 ntBASIC6.28□□□□□ -1.4
ZC3H4Q9UPT8 CEP57L1P1-201ENST00000430943 1201 ntBASIC6.28□□□□□ -1.4
ZC3H4Q9UPT8 RPS29P10-201ENST00000439197 166 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms