Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.02□□□□□ -1.93
CDH9Q9ULB4 AC055876.1-202ENST00000567053 138 ntBASIC3.02□□□□□ -1.93
CDH9Q9ULB4 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.02□□□□□ -1.93
CDH9Q9ULB4 MIR5708-201ENST00000579723 85 ntBASIC3.02□□□□□ -1.93
CDH9Q9ULB4 MAGOH2P-202ENST00000584384 429 ntBASIC3.02□□□□□ -1.93
CDH9Q9ULB4 AC006504.3-201ENST00000586818 523 ntBASIC3.02□□□□□ -1.93
CDH9Q9ULB4 AC245036.5-201ENST00000596330 847 ntBASIC3.02□□□□□ -1.93
CDH9Q9ULB4 AC012443.1-201ENST00000605605 231 ntBASIC3.02□□□□□ -1.93
CDH9Q9ULB4 AC124016.2-201ENST00000610058 665 ntBASIC3.02□□□□□ -1.93
CDH9Q9ULB4 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.02□□□□□ -1.93
CDH9Q9ULB4 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.02□□□□□ -1.93
CDH9Q9ULB4 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
CDH9Q9ULB4 AC009487.2-201ENST00000420969 6821 ntBASIC3.02□□□□□ -1.93
CDH9Q9ULB4 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.01□□□□□ -1.93
CDH9Q9ULB4 FAM35BP-202ENST00000497389 3337 ntBASIC3.01□□□□□ -1.93
CDH9Q9ULB4 Y_RNA.25-201ENST00000362528 102 ntBASIC3.01□□□□□ -1.93
CDH9Q9ULB4 RNU5D-1-201ENST00000363299 116 ntBASIC3.01□□□□□ -1.93
CDH9Q9ULB4 MIR512-1-201ENST00000384913 84 ntBASIC3.01□□□□□ -1.93
CDH9Q9ULB4 BMS1P22-201ENST00000414726 313 ntBASIC3.01□□□□□ -1.93
CDH9Q9ULB4 C1DP1-201ENST00000426049 402 ntBASIC3.01□□□□□ -1.93
CDH9Q9ULB4 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.01□□□□□ -1.93
CDH9Q9ULB4 EZH2P1-201ENST00000431167 291 ntBASIC3.01□□□□□ -1.93
CDH9Q9ULB4 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.01□□□□□ -1.93
CDH9Q9ULB4 AC087499.2-201ENST00000432861 149 ntBASIC3.01□□□□□ -1.93
CDH9Q9ULB4 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.01□□□□□ -1.93
CDH9Q9ULB4 RPL23AP74-201ENST00000437246 471 ntBASIC3.01□□□□□ -1.93
CDH9Q9ULB4 AC105272.1-201ENST00000438604 198 ntBASIC3.01□□□□□ -1.93
CDH9Q9ULB4 AC112653.1-201ENST00000443851 386 ntBASIC3.01□□□□□ -1.93
CDH9Q9ULB4 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.01□□□□□ -1.93
CDH9Q9ULB4 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.01□□□□□ -1.93
CDH9Q9ULB4 HMGN1P5-201ENST00000448591 263 ntBASIC3.01□□□□□ -1.93
CDH9Q9ULB4 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.01□□□□□ -1.93
CDH9Q9ULB4 AC079776.3-201ENST00000450665 370 ntBASIC3.01□□□□□ -1.93
CDH9Q9ULB4 OR4G11P-201ENST00000492842 939 ntBASIC3.01□□□□□ -1.93
CDH9Q9ULB4 AC016550.1-201ENST00000505348 785 ntBASIC3.01□□□□□ -1.93
CDH9Q9ULB4 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.01□□□□□ -1.93
CDH9Q9ULB4 AC117522.3-201ENST00000507974 584 ntBASIC3.01□□□□□ -1.93
CDH9Q9ULB4 AC112198.4-201ENST00000515450 351 ntBASIC3.01□□□□□ -1.93
CDH9Q9ULB4 RNU1-103P-201ENST00000516502 125 ntBASIC3.01□□□□□ -1.93
CDH9Q9ULB4 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.01□□□□□ -1.93
CDH9Q9ULB4 OR5AK1P-201ENST00000524837 922 ntBASIC3.01□□□□□ -1.93
CDH9Q9ULB4 CYCSP39-201ENST00000565821 309 ntBASIC3.01□□□□□ -1.93
CDH9Q9ULB4 AC126365.2-201ENST00000580630 379 ntBASIC3.01□□□□□ -1.93
CDH9Q9ULB4 AC131902.3-201ENST00000611767 581 ntBASIC3.01□□□□□ -1.93
CDH9Q9ULB4 MIR6076-201ENST00000617521 113 ntBASIC3.01□□□□□ -1.93
CDH9Q9ULB4 AL512427.1-201ENST00000618593 349 ntBASIC3.01□□□□□ -1.93
CDH9Q9ULB4 AC007275.1-201ENST00000621243 671 ntBASIC3.01□□□□□ -1.93
CDH9Q9ULB4 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.01□□□□□ -1.93
CDH9Q9ULB4 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CDH9Q9ULB4 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
CDH9Q9ULB4 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CDH9Q9ULB4 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.01□□□□□ -1.93
CDH9Q9ULB4 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CDH9Q9ULB4 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3□□□□□ -1.93
CDH9Q9ULB4 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3□□□□□ -1.93
CDH9Q9ULB4 FAT1P1-201ENST00000406588 507 ntBASIC3□□□□□ -1.93
CDH9Q9ULB4 RNA5SP38-201ENST00000410750 119 ntBASIC3□□□□□ -1.93
CDH9Q9ULB4 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3□□□□□ -1.93
CDH9Q9ULB4 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3□□□□□ -1.93
CDH9Q9ULB4 SSXP9-201ENST00000417503 292 ntBASIC3□□□□□ -1.93
CDH9Q9ULB4 B3GALNT1P1-201ENST00000420569 975 ntBASIC3□□□□□ -1.93
CDH9Q9ULB4 MTCYBP11-201ENST00000447254 1109 ntBASIC3□□□□□ -1.93
CDH9Q9ULB4 AL590639.1-201ENST00000456484 337 ntBASIC3□□□□□ -1.93
CDH9Q9ULB4 PNPLA4P1-201ENST00000458328 305 ntBASIC3□□□□□ -1.93
CDH9Q9ULB4 RPL21P41-201ENST00000459863 264 ntBASIC3□□□□□ -1.93
CDH9Q9ULB4 AP001025.2-201ENST00000490908 477 ntBASIC3□□□□□ -1.93
CDH9Q9ULB4 COX7A2P2-201ENST00000505291 250 ntBASIC3□□□□□ -1.93
CDH9Q9ULB4 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3□□□□□ -1.93
CDH9Q9ULB4 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3□□□□□ -1.93
CDH9Q9ULB4 DEFB130C-202ENST00000530001 230 ntBASIC3□□□□□ -1.93
CDH9Q9ULB4 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3□□□□□ -1.93
CDH9Q9ULB4 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3□□□□□ -1.93
CDH9Q9ULB4 GTF3AP2-201ENST00000557014 266 ntBASIC3□□□□□ -1.93
CDH9Q9ULB4 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3□□□□□ -1.93
CDH9Q9ULB4 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3□□□□□ -1.93
CDH9Q9ULB4 AC078899.3-201ENST00000599065 212 ntBASIC3□□□□□ -1.93
CDH9Q9ULB4 AC090115.4-201ENST00000609970 188 ntBASIC3□□□□□ -1.93
CDH9Q9ULB4 AC010338.1-201ENST00000621823 717 ntBASIC3□□□□□ -1.93
CDH9Q9ULB4 AC090617.7-201ENST00000623952 126 ntBASIC3□□□□□ -1.93
CDH9Q9ULB4 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3□□□□□ -1.93
CDH9Q9ULB4 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3□□□□□ -1.93
CDH9Q9ULB4 OR4G11P-202ENST00000642116 1414 ntBASIC3□□□□□ -1.93
CDH9Q9ULB4 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CDH9Q9ULB4 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CDH9Q9ULB4 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.99□□□□□ -1.93
CDH9Q9ULB4 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CDH9Q9ULB4 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CDH9Q9ULB4 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CDH9Q9ULB4 MIR493-201ENST00000385254 89 ntBASIC2.99□□□□□ -1.93
CDH9Q9ULB4 SNORA40.4-201ENST00000390971 128 ntBASIC2.99□□□□□ -1.93
CDH9Q9ULB4 RNU6-882P-201ENST00000391025 103 ntBASIC2.99□□□□□ -1.93
CDH9Q9ULB4 RPS4XP3-201ENST00000398541 413 ntBASIC2.99□□□□□ -1.93
CDH9Q9ULB4 MTCO1P56-201ENST00000401674 224 ntBASIC2.99□□□□□ -1.93
CDH9Q9ULB4 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.99□□□□□ -1.93
CDH9Q9ULB4 RNU2-47P-201ENST00000410649 186 ntBASIC2.99□□□□□ -1.93
CDH9Q9ULB4 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.99□□□□□ -1.93
CDH9Q9ULB4 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.99□□□□□ -1.93
CDH9Q9ULB4 USP9YP21-201ENST00000420603 432 ntBASIC2.99□□□□□ -1.93
CDH9Q9ULB4 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.99□□□□□ -1.93
CDH9Q9ULB4 MUPP-201ENST00000438111 566 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms