Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 MTCO3P1-205ENST00000422088 832 ntBASIC3.51□□□□□ -1.85
CLIP2Q9UDT6 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.51□□□□□ -1.85
CLIP2Q9UDT6 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.51□□□□□ -1.85
CLIP2Q9UDT6 AL009048.1-201ENST00000450437 298 ntBASIC3.51□□□□□ -1.85
CLIP2Q9UDT6 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.51□□□□□ -1.85
CLIP2Q9UDT6 RPS29P26-201ENST00000477483 171 ntBASIC3.51□□□□□ -1.85
CLIP2Q9UDT6 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.51□□□□□ -1.85
CLIP2Q9UDT6 AC093767.1-201ENST00000504523 156 ntBASIC3.51□□□□□ -1.85
CLIP2Q9UDT6 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
CLIP2Q9UDT6 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.51□□□□□ -1.85
CLIP2Q9UDT6 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.51□□□□□ -1.85
CLIP2Q9UDT6 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.51□□□□□ -1.85
CLIP2Q9UDT6 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.51□□□□□ -1.85
CLIP2Q9UDT6 AC128687.1-201ENST00000605304 619 ntBASIC3.51□□□□□ -1.85
CLIP2Q9UDT6 AC091946.2-201ENST00000606105 291 ntBASIC3.51□□□□□ -1.85
CLIP2Q9UDT6 AC093010.3-201ENST00000570269 15214 ntBASIC3.51□□□□□ -1.85
CLIP2Q9UDT6 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
CLIP2Q9UDT6 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
CLIP2Q9UDT6 NUP58P1-201ENST00000502546 1738 ntBASIC3.5□□□□□ -1.85
CLIP2Q9UDT6 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
CLIP2Q9UDT6 RNU6-1249P-201ENST00000363237 111 ntBASIC3.5□□□□□ -1.85
CLIP2Q9UDT6 SNORD82-201ENST00000365530 70 ntBASIC3.5□□□□□ -1.85
CLIP2Q9UDT6 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CLIP2Q9UDT6 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.5□□□□□ -1.85
CLIP2Q9UDT6 RNA5SP344-201ENST00000411081 104 ntBASIC3.5□□□□□ -1.85
CLIP2Q9UDT6 LUZP4P1-201ENST00000415420 344 ntBASIC3.5□□□□□ -1.85
CLIP2Q9UDT6 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.5□□□□□ -1.85
CLIP2Q9UDT6 DPRXP1-201ENST00000426312 460 ntBASIC3.5□□□□□ -1.85
CLIP2Q9UDT6 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.5□□□□□ -1.85
CLIP2Q9UDT6 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.5□□□□□ -1.85
CLIP2Q9UDT6 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.5□□□□□ -1.85
CLIP2Q9UDT6 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.5□□□□□ -1.85
CLIP2Q9UDT6 PRELID3BP6-201ENST00000503839 571 ntBASIC3.5□□□□□ -1.85
CLIP2Q9UDT6 AC097462.2-201ENST00000504623 481 ntBASIC3.5□□□□□ -1.85
CLIP2Q9UDT6 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.5□□□□□ -1.85
CLIP2Q9UDT6 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.5□□□□□ -1.85
CLIP2Q9UDT6 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.5□□□□□ -1.85
CLIP2Q9UDT6 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CLIP2Q9UDT6 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.5□□□□□ -1.85
CLIP2Q9UDT6 AC025811.1-201ENST00000604312 472 ntBASIC3.5□□□□□ -1.85
CLIP2Q9UDT6 AC009974.1-201ENST00000608881 455 ntBASIC3.5□□□□□ -1.85
CLIP2Q9UDT6 AC006329.2-201ENST00000611491 394 ntBASIC3.5□□□□□ -1.85
CLIP2Q9UDT6 AC084782.3-201ENST00000612282 578 ntBASIC3.5□□□□□ -1.85
CLIP2Q9UDT6 CYCSP41-201ENST00000616920 296 ntBASIC3.5□□□□□ -1.85
CLIP2Q9UDT6 AC010975.3-201ENST00000618727 978 ntBASIC3.5□□□□□ -1.85
CLIP2Q9UDT6 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.5□□□□□ -1.85
CLIP2Q9UDT6 AC084824.4-201ENST00000620106 731 ntBASIC3.5□□□□□ -1.85
CLIP2Q9UDT6 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.5□□□□□ -1.85
CLIP2Q9UDT6 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.5□□□□□ -1.85
CLIP2Q9UDT6 AC013437.2-201ENST00000639587 677 ntBASIC3.5□□□□□ -1.85
CLIP2Q9UDT6 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
CLIP2Q9UDT6 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
CLIP2Q9UDT6 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.5□□□□□ -1.85
CLIP2Q9UDT6 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CLIP2Q9UDT6 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
CLIP2Q9UDT6 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.5□□□□□ -1.85
CLIP2Q9UDT6 AC244517.1-201ENST00000606030 2086 ntBASIC3.5□□□□□ -1.85
CLIP2Q9UDT6 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.5□□□□□ -1.85
CLIP2Q9UDT6 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CLIP2Q9UDT6 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.49□□□□□ -1.85
CLIP2Q9UDT6 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CLIP2Q9UDT6 GDI2P1-201ENST00000429312 1336 ntBASIC3.49□□□□□ -1.85
CLIP2Q9UDT6 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
CLIP2Q9UDT6 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CLIP2Q9UDT6 RNU6-1000P-201ENST00000391066 106 ntBASIC3.49□□□□□ -1.85
CLIP2Q9UDT6 U3.29-201ENST00000391296 212 ntBASIC3.49□□□□□ -1.85
CLIP2Q9UDT6 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.49□□□□□ -1.85
CLIP2Q9UDT6 MTCO2P8-201ENST00000412213 658 ntBASIC3.49□□□□□ -1.85
CLIP2Q9UDT6 MTND4P3-201ENST00000417829 541 ntBASIC3.49□□□□□ -1.85
CLIP2Q9UDT6 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.49□□□□□ -1.85
CLIP2Q9UDT6 C1DP1-201ENST00000426049 402 ntBASIC3.49□□□□□ -1.85
CLIP2Q9UDT6 MTCO1P3-201ENST00000429327 192 ntBASIC3.49□□□□□ -1.85
CLIP2Q9UDT6 AL139132.1-201ENST00000431587 344 ntBASIC3.49□□□□□ -1.85
CLIP2Q9UDT6 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.49□□□□□ -1.85
CLIP2Q9UDT6 SETP8-201ENST00000435341 628 ntBASIC3.49□□□□□ -1.85
CLIP2Q9UDT6 AC107083.1-201ENST00000439643 279 ntBASIC3.49□□□□□ -1.85
CLIP2Q9UDT6 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.49□□□□□ -1.85
CLIP2Q9UDT6 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3.49□□□□□ -1.85
CLIP2Q9UDT6 RPS20P24-201ENST00000457473 361 ntBASIC3.49□□□□□ -1.85
CLIP2Q9UDT6 RPS23P3-201ENST00000470993 430 ntBASIC3.49□□□□□ -1.85
CLIP2Q9UDT6 AP004217.1-201ENST00000480579 346 ntBASIC3.49□□□□□ -1.85
CLIP2Q9UDT6 AC105914.1-201ENST00000511798 226 ntBASIC3.49□□□□□ -1.85
CLIP2Q9UDT6 SCGB1D5P-201ENST00000515134 247 ntBASIC3.49□□□□□ -1.85
CLIP2Q9UDT6 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.49□□□□□ -1.85
CLIP2Q9UDT6 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.49□□□□□ -1.85
CLIP2Q9UDT6 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.49□□□□□ -1.85
CLIP2Q9UDT6 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.49□□□□□ -1.85
CLIP2Q9UDT6 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.49□□□□□ -1.85
CLIP2Q9UDT6 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.49□□□□□ -1.85
CLIP2Q9UDT6 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.49□□□□□ -1.85
CLIP2Q9UDT6 SNORD84-203ENST00000584275 78 ntBASIC3.49□□□□□ -1.85
CLIP2Q9UDT6 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.49□□□□□ -1.85
CLIP2Q9UDT6 XIAPP1-201ENST00000603162 600 ntBASIC3.49□□□□□ -1.85
CLIP2Q9UDT6 AC092954.1-201ENST00000609121 445 ntBASIC3.49□□□□□ -1.85
CLIP2Q9UDT6 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.49□□□□□ -1.85
CLIP2Q9UDT6 AC079395.3-201ENST00000615161 484 ntBASIC3.49□□□□□ -1.85
CLIP2Q9UDT6 SCARNA15.3-201ENST00000626315 122 ntBASIC3.49□□□□□ -1.85
CLIP2Q9UDT6 SCARNA4.1-201ENST00000628597 123 ntBASIC3.49□□□□□ -1.85
CLIP2Q9UDT6 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.49□□□□□ -1.85
CLIP2Q9UDT6 AC084035.1-201ENST00000634543 607 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms