Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 HMGB1P17-201ENST00000403495 628 ntBASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 MTATP6P27-201ENST00000416987 621 ntBASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 TIMM9P2-201ENST00000419324 266 ntBASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 AL137014.1-201ENST00000420490 1226 ntBASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 RPL7P30-201ENST00000420888 709 ntBASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 AL513175.2-201ENST00000422071 443 ntBASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 COTL1P1-201ENST00000422309 375 ntBASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 USP9YP11-201ENST00000427537 717 ntBASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 AL590233.1-201ENST00000430017 456 ntBASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 AL139132.1-201ENST00000431587 344 ntBASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 USP9YP24-201ENST00000434374 697 ntBASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 HSPE1P28-201ENST00000443139 211 ntBASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 USP9YP17-201ENST00000444617 696 ntBASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 AC005297.2-201ENST00000450430 606 ntBASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 Z82190.1-201ENST00000454534 490 ntBASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 RPL18AP17-201ENST00000455326 198 ntBASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 NECAP1P2-201ENST00000455668 727 ntBASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 AC005410.1-202ENST00000460347 485 ntBASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 KCTD9P5-201ENST00000504141 1170 ntBASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 POU5F1P7-201ENST00000508759 541 ntBASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 SNORA31.8-201ENST00000516327 108 ntBASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 SCARNA13-201ENST00000516672 275 ntBASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 RPL12P22-201ENST00000519073 490 ntBASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 AC068657.1-201ENST00000520807 306 ntBASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 AC022861.1-201ENST00000522981 663 ntBASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 SNRPGP16-201ENST00000533275 226 ntBASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 AP001029.3-201ENST00000588063 596 ntBASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 AP001269.3-201ENST00000588718 329 ntBASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 BNIP3P39-201ENST00000601077 554 ntBASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 RPP40P2-201ENST00000603596 712 ntBASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 AC092953.2-201ENST00000608000 699 ntBASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 AC109809.1-201ENST00000619665 545 ntBASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 AC006386.2-201ENST00000624491 75 ntBASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 AC012005.1-201ENST00000624575 75 ntBASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 AL356473.1-201ENST00000406203 1408 ntBASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CLCF1Q9UBD9 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 AL079343.1-201ENST00000572358 1771 ntBASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 SGO1P2-201ENST00000429458 1589 ntBASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 SNORD56.3-201ENST00000363507 71 ntBASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 U3.11-201ENST00000364476 212 ntBASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 AC092648.1-201ENST00000425870 423 ntBASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 AC079780.1-201ENST00000428259 207 ntBASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 OR2B8P-201ENST00000432841 938 ntBASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 AL831737.1-201ENST00000441288 271 ntBASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 RPL23AP31-201ENST00000456160 467 ntBASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 AC091179.1-201ENST00000461606 579 ntBASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 RPS29P26-201ENST00000477483 171 ntBASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 AL049873.1-201ENST00000480540 376 ntBASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 RN7SL20P-201ENST00000488827 297 ntBASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 AC093278.1-201ENST00000494700 600 ntBASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 AC134050.1-201ENST00000495088 933 ntBASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 MTCYBP17-201ENST00000503579 789 ntBASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 XKRY-201ENST00000510392 1100 ntBASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 AC105914.1-201ENST00000511798 226 ntBASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 RNU1-103P-201ENST00000516502 125 ntBASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 FAM60BP-201ENST00000578364 658 ntBASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 OR4K7P-201ENST00000580232 945 ntBASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 AP001330.4-201ENST00000604350 154 ntBASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 AL031176.1-201ENST00000604554 466 ntBASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 AL033523.1-201ENST00000605153 153 ntBASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 RNU4-5P-201ENST00000607255 135 ntBASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 AL451074.6-201ENST00000608512 729 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms