Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 DUSP12P1-201ENST00000612874 516 ntBASIC5.48□□□□□ -1.53
CNTN3Q9P232 MIR6128-201ENST00000615528 109 ntBASIC5.48□□□□□ -1.53
CNTN3Q9P232 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.48□□□□□ -1.53
CNTN3Q9P232 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CNTN3Q9P232 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.48□□□□□ -1.53
CNTN3Q9P232 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
CNTN3Q9P232 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CNTN3Q9P232 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CNTN3Q9P232 EFTUD1P2-201ENST00000514817 1603 ntBASIC5.48□□□□□ -1.53
CNTN3Q9P232 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CNTN3Q9P232 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.48□□□□□ -1.53
CNTN3Q9P232 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CNTN3Q9P232 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
CNTN3Q9P232 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CNTN3Q9P232 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CNTN3Q9P232 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CNTN3Q9P232 BTBD10P1-201ENST00000549824 1352 ntBASIC5.47□□□□□ -1.53
CNTN3Q9P232 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CNTN3Q9P232 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
CNTN3Q9P232 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
CNTN3Q9P232 Y_RNA.476-201ENST00000384347 108 ntBASIC5.47□□□□□ -1.53
CNTN3Q9P232 SNORA75.6-201ENST00000391318 127 ntBASIC5.47□□□□□ -1.53
CNTN3Q9P232 AL583834.1-201ENST00000406943 343 ntBASIC5.47□□□□□ -1.53
CNTN3Q9P232 SNORA77-201ENST00000408716 125 ntBASIC5.47□□□□□ -1.53
CNTN3Q9P232 RNU4-6P-201ENST00000410804 122 ntBASIC5.47□□□□□ -1.53
CNTN3Q9P232 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CNTN3Q9P232 NRBF2P3-201ENST00000432731 865 ntBASIC5.47□□□□□ -1.53
CNTN3Q9P232 RPS29P9-201ENST00000440360 171 ntBASIC5.47□□□□□ -1.53
CNTN3Q9P232 RPL12P25-201ENST00000455592 494 ntBASIC5.47□□□□□ -1.53
CNTN3Q9P232 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.47□□□□□ -1.53
CNTN3Q9P232 U8.20-201ENST00000459445 131 ntBASIC5.47□□□□□ -1.53
CNTN3Q9P232 DYNLL1P5-201ENST00000467158 270 ntBASIC5.47□□□□□ -1.53
CNTN3Q9P232 AP002812.1-201ENST00000495378 474 ntBASIC5.47□□□□□ -1.53
CNTN3Q9P232 AC140172.1-201ENST00000502928 141 ntBASIC5.47□□□□□ -1.53
CNTN3Q9P232 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC5.47□□□□□ -1.53
CNTN3Q9P232 RN7SKP277-201ENST00000516895 283 ntBASIC5.47□□□□□ -1.53
CNTN3Q9P232 AC103783.1-201ENST00000520506 373 ntBASIC5.47□□□□□ -1.53
CNTN3Q9P232 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC5.47□□□□□ -1.53
CNTN3Q9P232 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC5.47□□□□□ -1.53
CNTN3Q9P232 AC008033.2-201ENST00000542626 177 ntBASIC5.47□□□□□ -1.53
CNTN3Q9P232 AC020910.3-201ENST00000603701 874 ntBASIC5.47□□□□□ -1.53
CNTN3Q9P232 AC022893.2-201ENST00000564832 3296 ntBASIC5.47□□□□□ -1.53
CNTN3Q9P232 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CNTN3Q9P232 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CNTN3Q9P232 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CNTN3Q9P232 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CNTN3Q9P232 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CNTN3Q9P232 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CNTN3Q9P232 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CNTN3Q9P232 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.47□□□□□ -1.53
CNTN3Q9P232 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.47□□□□□ -1.53
CNTN3Q9P232 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
CNTN3Q9P232 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
CNTN3Q9P232 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
CNTN3Q9P232 MTCO1P24-201ENST00000515438 1558 ntBASIC5.46□□□□□ -1.53
CNTN3Q9P232 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
CNTN3Q9P232 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
CNTN3Q9P232 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.46□□□□□ -1.54
CNTN3Q9P232 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
CNTN3Q9P232 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CNTN3Q9P232 AL672167.1-205ENST00000641112 3080 ntBASIC5.46□□□□□ -1.54
CNTN3Q9P232 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CNTN3Q9P232 RNU6-946P-201ENST00000383878 107 ntBASIC5.46□□□□□ -1.54
CNTN3Q9P232 SNORD70.1-201ENST00000391007 85 ntBASIC5.46□□□□□ -1.54
CNTN3Q9P232 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.46□□□□□ -1.54
CNTN3Q9P232 RPLP0P7-201ENST00000416050 667 ntBASIC5.46□□□□□ -1.54
CNTN3Q9P232 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC5.46□□□□□ -1.54
CNTN3Q9P232 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.46□□□□□ -1.54
CNTN3Q9P232 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.46□□□□□ -1.54
CNTN3Q9P232 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.46□□□□□ -1.54
CNTN3Q9P232 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC5.46□□□□□ -1.54
CNTN3Q9P232 CECR9-201ENST00000453421 199 ntBASIC5.46□□□□□ -1.54
CNTN3Q9P232 RNU7-167P-201ENST00000459160 62 ntBASIC5.46□□□□□ -1.54
CNTN3Q9P232 snoU13.20-201ENST00000459180 104 ntBASIC5.46□□□□□ -1.54
CNTN3Q9P232 RN7SL441P-201ENST00000492388 296 ntBASIC5.46□□□□□ -1.54
CNTN3Q9P232 RBBP4P6-201ENST00000508098 202 ntBASIC5.46□□□□□ -1.54
CNTN3Q9P232 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC5.46□□□□□ -1.54
CNTN3Q9P232 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.46□□□□□ -1.54
CNTN3Q9P232 SNORA14.1-201ENST00000516113 141 ntBASIC5.46□□□□□ -1.54
CNTN3Q9P232 RNU6-1069P-201ENST00000516612 133 ntBASIC5.46□□□□□ -1.54
CNTN3Q9P232 RNU1-54P-201ENST00000517181 120 ntBASIC5.46□□□□□ -1.54
CNTN3Q9P232 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC5.46□□□□□ -1.54
CNTN3Q9P232 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC5.46□□□□□ -1.54
CNTN3Q9P232 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.46□□□□□ -1.54
CNTN3Q9P232 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC5.46□□□□□ -1.54
CNTN3Q9P232 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC5.46□□□□□ -1.54
CNTN3Q9P232 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.46□□□□□ -1.54
CNTN3Q9P232 MIR5692C1-201ENST00000585309 91 ntBASIC5.46□□□□□ -1.54
CNTN3Q9P232 BNIP3P16-201ENST00000589779 534 ntBASIC5.46□□□□□ -1.54
CNTN3Q9P232 AC011487.3-201ENST00000593607 453 ntBASIC5.46□□□□□ -1.54
CNTN3Q9P232 AC174048.1-201ENST00000603389 144 ntBASIC5.46□□□□□ -1.54
CNTN3Q9P232 AC006329.2-201ENST00000611491 394 ntBASIC5.46□□□□□ -1.54
CNTN3Q9P232 FAM157A-202ENST00000615155 405 ntBASIC5.46□□□□□ -1.54
CNTN3Q9P232 AC007485.1-201ENST00000616755 206 ntBASIC5.46□□□□□ -1.54
CNTN3Q9P232 AC087385.3-201ENST00000620477 187 ntBASIC5.46□□□□□ -1.54
CNTN3Q9P232 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
CNTN3Q9P232 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.46□□□□□ -1.54
CNTN3Q9P232 DDX18P3-201ENST00000404856 2007 ntBASIC5.46□□□□□ -1.54
CNTN3Q9P232 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
CNTN3Q9P232 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms