Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
BLOC1S4Q9NUP1 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
BLOC1S4Q9NUP1 AL513302.2-201ENST00000562313 1842 ntBASIC3.84□□□□□ -1.79
BLOC1S4Q9NUP1 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.84□□□□□ -1.79
BLOC1S4Q9NUP1 AL391994.1-201ENST00000254724 282 ntBASIC3.84□□□□□ -1.79
BLOC1S4Q9NUP1 MIR30E-201ENST00000362104 92 ntBASIC3.84□□□□□ -1.79
BLOC1S4Q9NUP1 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
BLOC1S4Q9NUP1 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
BLOC1S4Q9NUP1 RNU6-1200P-201ENST00000384162 107 ntBASIC3.84□□□□□ -1.79
BLOC1S4Q9NUP1 RPS4XP3-201ENST00000398541 413 ntBASIC3.84□□□□□ -1.79
BLOC1S4Q9NUP1 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
BLOC1S4Q9NUP1 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
BLOC1S4Q9NUP1 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.84□□□□□ -1.79
BLOC1S4Q9NUP1 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.84□□□□□ -1.79
BLOC1S4Q9NUP1 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.84□□□□□ -1.79
BLOC1S4Q9NUP1 AC092641.1-201ENST00000440229 772 ntBASIC3.84□□□□□ -1.79
BLOC1S4Q9NUP1 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.84□□□□□ -1.79
BLOC1S4Q9NUP1 AC007537.2-201ENST00000472093 511 ntBASIC3.84□□□□□ -1.79
BLOC1S4Q9NUP1 AL049830.2-201ENST00000480072 201 ntBASIC3.84□□□□□ -1.79
BLOC1S4Q9NUP1 AC109464.2-201ENST00000510242 943 ntBASIC3.84□□□□□ -1.79
BLOC1S4Q9NUP1 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
BLOC1S4Q9NUP1 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.84□□□□□ -1.79
BLOC1S4Q9NUP1 RNU6-678P-201ENST00000516832 109 ntBASIC3.84□□□□□ -1.79
BLOC1S4Q9NUP1 IGKV2-26-201ENST00000518305 343 ntBASIC3.84□□□□□ -1.79
BLOC1S4Q9NUP1 RPL12P22-201ENST00000519073 490 ntBASIC3.84□□□□□ -1.79
BLOC1S4Q9NUP1 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.84□□□□□ -1.79
BLOC1S4Q9NUP1 AC087276.1-201ENST00000529659 480 ntBASIC3.84□□□□□ -1.79
BLOC1S4Q9NUP1 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.84□□□□□ -1.79
BLOC1S4Q9NUP1 AC007458.1-201ENST00000542812 373 ntBASIC3.84□□□□□ -1.79
BLOC1S4Q9NUP1 OR7K1P-201ENST00000546439 926 ntBASIC3.84□□□□□ -1.79
BLOC1S4Q9NUP1 ELOCP32-201ENST00000548625 324 ntBASIC3.84□□□□□ -1.79
BLOC1S4Q9NUP1 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.84□□□□□ -1.79
BLOC1S4Q9NUP1 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.84□□□□□ -1.79
BLOC1S4Q9NUP1 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.84□□□□□ -1.79
BLOC1S4Q9NUP1 AP000811.1-201ENST00000603803 651 ntBASIC3.84□□□□□ -1.79
BLOC1S4Q9NUP1 AC008993.2-201ENST00000631744 806 ntBASIC3.84□□□□□ -1.79
BLOC1S4Q9NUP1 AC127502.3-201ENST00000636170 1206 ntBASIC3.84□□□□□ -1.79
BLOC1S4Q9NUP1 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
BLOC1S4Q9NUP1 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.84□□□□□ -1.79
BLOC1S4Q9NUP1 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.84□□□□□ -1.8
BLOC1S4Q9NUP1 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
BLOC1S4Q9NUP1 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
BLOC1S4Q9NUP1 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.83□□□□□ -1.8
BLOC1S4Q9NUP1 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
BLOC1S4Q9NUP1 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
BLOC1S4Q9NUP1 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
BLOC1S4Q9NUP1 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
BLOC1S4Q9NUP1 RNU6-754P-201ENST00000391166 107 ntBASIC3.83□□□□□ -1.8
BLOC1S4Q9NUP1 PTMAP2-201ENST00000397627 327 ntBASIC3.83□□□□□ -1.8
BLOC1S4Q9NUP1 RN7SKP111-201ENST00000410349 271 ntBASIC3.83□□□□□ -1.8
BLOC1S4Q9NUP1 RNU6-1077P-201ENST00000410506 102 ntBASIC3.83□□□□□ -1.8
BLOC1S4Q9NUP1 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
BLOC1S4Q9NUP1 Z99755.1-201ENST00000414048 380 ntBASIC3.83□□□□□ -1.8
BLOC1S4Q9NUP1 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
BLOC1S4Q9NUP1 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.83□□□□□ -1.8
BLOC1S4Q9NUP1 RPL7L1P10-201ENST00000427790 463 ntBASIC3.83□□□□□ -1.8
BLOC1S4Q9NUP1 MTCYBP3-201ENST00000445588 1137 ntBASIC3.83□□□□□ -1.8
BLOC1S4Q9NUP1 AP1S2P1-201ENST00000457344 379 ntBASIC3.83□□□□□ -1.8
BLOC1S4Q9NUP1 SNORA84-201ENST00000459229 133 ntBASIC3.83□□□□□ -1.8
BLOC1S4Q9NUP1 RPL7P15-201ENST00000461190 712 ntBASIC3.83□□□□□ -1.8
BLOC1S4Q9NUP1 AC021205.2-201ENST00000480069 347 ntBASIC3.83□□□□□ -1.8
BLOC1S4Q9NUP1 RPL32P34-201ENST00000486380 400 ntBASIC3.83□□□□□ -1.8
BLOC1S4Q9NUP1 AC020893.1-201ENST00000502452 580 ntBASIC3.83□□□□□ -1.8
BLOC1S4Q9NUP1 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.83□□□□□ -1.8
BLOC1S4Q9NUP1 SNORA70.19-201ENST00000516717 90 ntBASIC3.83□□□□□ -1.8
BLOC1S4Q9NUP1 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.83□□□□□ -1.8
BLOC1S4Q9NUP1 AC005476.1-201ENST00000554427 397 ntBASIC3.83□□□□□ -1.8
BLOC1S4Q9NUP1 TGIF1P1-201ENST00000558095 802 ntBASIC3.83□□□□□ -1.8
BLOC1S4Q9NUP1 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.83□□□□□ -1.8
BLOC1S4Q9NUP1 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.83□□□□□ -1.8
BLOC1S4Q9NUP1 BNIP3P23-201ENST00000599655 511 ntBASIC3.83□□□□□ -1.8
BLOC1S4Q9NUP1 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.83□□□□□ -1.8
BLOC1S4Q9NUP1 AC112187.2-201ENST00000604345 283 ntBASIC3.83□□□□□ -1.8
BLOC1S4Q9NUP1 SNORA51-201ENST00000606420 132 ntBASIC3.83□□□□□ -1.8
BLOC1S4Q9NUP1 MIR7851-201ENST00000610611 160 ntBASIC3.83□□□□□ -1.8
BLOC1S4Q9NUP1 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.83□□□□□ -1.8
BLOC1S4Q9NUP1 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
BLOC1S4Q9NUP1 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
BLOC1S4Q9NUP1 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
BLOC1S4Q9NUP1 HSPA8P1-201ENST00000425843 1833 ntBASIC3.83□□□□□ -1.8
BLOC1S4Q9NUP1 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.83□□□□□ -1.8
BLOC1S4Q9NUP1 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
BLOC1S4Q9NUP1 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.83□□□□□ -1.8
BLOC1S4Q9NUP1 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
BLOC1S4Q9NUP1 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 RNY4P24-201ENST00000362735 96 ntBASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 RNA5SP197-201ENST00000363357 119 ntBASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 Y_RNA.302-201ENST00000364997 102 ntBASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 SKINT1L-201ENST00000401057 817 ntBASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 Z98941.1-201ENST00000407764 100 ntBASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 HMGB1P11-201ENST00000413899 637 ntBASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms