Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.15□□□□□ -1.75
SMC4Q9NTJ3 MTCYBP45-201ENST00000435243 565 ntBASIC4.15□□□□□ -1.75
SMC4Q9NTJ3 ISCA1P2-201ENST00000438679 421 ntBASIC4.15□□□□□ -1.75
SMC4Q9NTJ3 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.15□□□□□ -1.75
SMC4Q9NTJ3 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SMC4Q9NTJ3 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.15□□□□□ -1.75
SMC4Q9NTJ3 BX322784.1-201ENST00000455793 1077 ntBASIC4.15□□□□□ -1.75
SMC4Q9NTJ3 MEMO1P3-201ENST00000459811 302 ntBASIC4.15□□□□□ -1.75
SMC4Q9NTJ3 MLLT10P2-201ENST00000506434 249 ntBASIC4.15□□□□□ -1.75
SMC4Q9NTJ3 KLHL2P1-201ENST00000508691 521 ntBASIC4.15□□□□□ -1.75
SMC4Q9NTJ3 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.15□□□□□ -1.75
SMC4Q9NTJ3 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.15□□□□□ -1.75
SMC4Q9NTJ3 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC4.15□□□□□ -1.75
SMC4Q9NTJ3 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC4.15□□□□□ -1.75
SMC4Q9NTJ3 OR6C7P-201ENST00000547875 934 ntBASIC4.15□□□□□ -1.75
SMC4Q9NTJ3 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.15□□□□□ -1.75
SMC4Q9NTJ3 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.15□□□□□ -1.75
SMC4Q9NTJ3 AL354943.1-201ENST00000572103 781 ntBASIC4.15□□□□□ -1.75
SMC4Q9NTJ3 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.15□□□□□ -1.75
SMC4Q9NTJ3 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.15□□□□□ -1.75
SMC4Q9NTJ3 CKS1BP3-201ENST00000600888 237 ntBASIC4.15□□□□□ -1.75
SMC4Q9NTJ3 AL133507.1-201ENST00000605269 557 ntBASIC4.15□□□□□ -1.75
SMC4Q9NTJ3 AL139418.1-201ENST00000613613 177 ntBASIC4.15□□□□□ -1.75
SMC4Q9NTJ3 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.15□□□□□ -1.75
SMC4Q9NTJ3 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.15□□□□□ -1.75
SMC4Q9NTJ3 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.15□□□□□ -1.75
SMC4Q9NTJ3 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
SMC4Q9NTJ3 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SMC4Q9NTJ3 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SMC4Q9NTJ3 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
SMC4Q9NTJ3 SGO1P2-201ENST00000429458 1589 ntBASIC4.14□□□□□ -1.75
SMC4Q9NTJ3 AC118273.1-201ENST00000525324 3006 ntBASIC4.14□□□□□ -1.75
SMC4Q9NTJ3 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.14□□□□□ -1.75
SMC4Q9NTJ3 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.14□□□□□ -1.75
SMC4Q9NTJ3 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
SMC4Q9NTJ3 SNORA4.1-201ENST00000364263 144 ntBASIC4.14□□□□□ -1.75
SMC4Q9NTJ3 RNU6-359P-201ENST00000365466 108 ntBASIC4.14□□□□□ -1.75
SMC4Q9NTJ3 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SMC4Q9NTJ3 RNVU1-14-201ENST00000384770 164 ntBASIC4.14□□□□□ -1.75
SMC4Q9NTJ3 SKINT1L-201ENST00000401057 817 ntBASIC4.14□□□□□ -1.75
SMC4Q9NTJ3 RNU2-47P-201ENST00000410649 186 ntBASIC4.14□□□□□ -1.75
SMC4Q9NTJ3 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.14□□□□□ -1.75
SMC4Q9NTJ3 RPL31P12-201ENST00000422587 358 ntBASIC4.14□□□□□ -1.75
SMC4Q9NTJ3 MTCO1P39-201ENST00000426148 480 ntBASIC4.14□□□□□ -1.75
SMC4Q9NTJ3 AC005326.1-201ENST00000429197 123 ntBASIC4.14□□□□□ -1.75
SMC4Q9NTJ3 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.14□□□□□ -1.75
SMC4Q9NTJ3 AL662791.1-201ENST00000441992 928 ntBASIC4.14□□□□□ -1.75
SMC4Q9NTJ3 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.14□□□□□ -1.75
SMC4Q9NTJ3 AC104027.1-201ENST00000521887 300 ntBASIC4.14□□□□□ -1.75
SMC4Q9NTJ3 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SMC4Q9NTJ3 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SMC4Q9NTJ3 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.14□□□□□ -1.75
SMC4Q9NTJ3 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.14□□□□□ -1.75
SMC4Q9NTJ3 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.14□□□□□ -1.75
SMC4Q9NTJ3 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.14□□□□□ -1.75
SMC4Q9NTJ3 MIR2682-201ENST00000580305 110 ntBASIC4.14□□□□□ -1.75
SMC4Q9NTJ3 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.14□□□□□ -1.75
SMC4Q9NTJ3 SRGNP1-201ENST00000603392 451 ntBASIC4.14□□□□□ -1.75
SMC4Q9NTJ3 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.14□□□□□ -1.75
SMC4Q9NTJ3 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.14□□□□□ -1.75
SMC4Q9NTJ3 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SMC4Q9NTJ3 AC018816.2-201ENST00000621460 353 ntBASIC4.14□□□□□ -1.75
SMC4Q9NTJ3 AC091903.1-201ENST00000624322 454 ntBASIC4.14□□□□□ -1.75
SMC4Q9NTJ3 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.14□□□□□ -1.75
SMC4Q9NTJ3 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.14□□□□□ -1.75
SMC4Q9NTJ3 BCLAF1P1-201ENST00000505813 2752 ntBASIC4.14□□□□□ -1.75
SMC4Q9NTJ3 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SMC4Q9NTJ3 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.14□□□□□ -1.75
SMC4Q9NTJ3 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 RPL7P26-201ENST00000333817 754 ntBASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 RNU6-50P-201ENST00000362356 103 ntBASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 RNU6-462P-201ENST00000362659 105 ntBASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 RNU6-1214P-201ENST00000363650 109 ntBASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 RNA5SP387-201ENST00000364226 106 ntBASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 DEFB109C-201ENST00000382575 264 ntBASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 DEFB109B-201ENST00000382656 264 ntBASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 AL136372.1-201ENST00000403060 228 ntBASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 RNA5SP129-201ENST00000410276 118 ntBASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 RPS7P13-201ENST00000413955 498 ntBASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 Z75741.1-201ENST00000446793 314 ntBASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 AC002381.1-201ENST00000447049 280 ntBASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 snoU13.8-201ENST00000458890 104 ntBASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 AP002884.2-201ENST00000471647 395 ntBASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 RN7SL442P-201ENST00000473804 320 ntBASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 AC104563.1-201ENST00000476147 376 ntBASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 AC093281.2-201ENST00000510153 597 ntBASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 AC105914.1-201ENST00000511798 226 ntBASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 AC024589.1-201ENST00000512207 263 ntBASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms