Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 Y_RNA.231-201ENST00000364358 102 ntBASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 RNU6-1318P-201ENST00000365389 103 ntBASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 RNU4-48P-201ENST00000365559 182 ntBASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 RNU6-1297P-201ENST00000384415 104 ntBASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 RPL31P52-201ENST00000407532 367 ntBASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 RNU6-193P-201ENST00000410977 107 ntBASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 AC048351.1-201ENST00000420064 602 ntBASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 HSPE1P1-201ENST00000421494 318 ntBASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 HMGN2P27-201ENST00000427352 270 ntBASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 CEACAMP1-201ENST00000434624 1035 ntBASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 RPS26P56-201ENST00000444468 240 ntBASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 AL500522.2-201ENST00000448562 343 ntBASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 AL583843.1-201ENST00000456070 346 ntBASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 AL163540.1-201ENST00000485382 386 ntBASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 SUMO2P4-201ENST00000504193 276 ntBASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 RNU6-1046P-201ENST00000516538 107 ntBASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 SCOCP1-201ENST00000554676 349 ntBASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 NCAPGP2-201ENST00000557911 754 ntBASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 MIR5685-201ENST00000579080 79 ntBASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 MIR3146-201ENST00000580367 79 ntBASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 MIR4298-201ENST00000584380 73 ntBASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 7SK.10-201ENST00000621414 298 ntBASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 AC040168.1-201ENST00000623594 991 ntBASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CNTNAP4Q9C0A0 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 AC107081.3-201ENST00000612715 2034 ntBASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 MTND5P33-201ENST00000571250 1450 ntBASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 AC073136.1-201ENST00000449426 2884 ntBASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 Y_RNA.146-201ENST00000363549 102 ntBASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 RNU6-525P-201ENST00000363685 104 ntBASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 RNU6-343P-201ENST00000364709 104 ntBASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 RNU6-639P-201ENST00000384074 107 ntBASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 Y_RNA.459-201ENST00000384251 102 ntBASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 MIR1-2-201ENST00000384961 85 ntBASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 AL356421.1-201ENST00000403255 413 ntBASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 AL591416.1-201ENST00000404015 867 ntBASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 RNU4-26P-201ENST00000410270 107 ntBASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 AC018630.2-202ENST00000422992 927 ntBASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 USP9YP16-201ENST00000430287 407 ntBASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 MTND3P16-201ENST00000452205 344 ntBASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 USP9YP23-201ENST00000455085 407 ntBASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 AC027575.1-201ENST00000481064 460 ntBASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 RNA5SP360-201ENST00000516555 118 ntBASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 RNA5SP337-201ENST00000517007 109 ntBASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 SNORA25.17-201ENST00000517184 124 ntBASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 LARP7P2-201ENST00000575306 125 ntBASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 AC105224.1-201ENST00000587055 421 ntBASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 AC241377.1-201ENST00000619797 406 ntBASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 CR392039.5-201ENST00000623201 510 ntBASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 CR392039.4-201ENST00000624968 501 ntBASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CNTNAP4Q9C0A0 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 193.9 ms