Protein–RNA interactions for Protein: Q9C026

TRIM9, E3 ubiquitin-protein ligase TRIM9, humanhuman

Predictions only

Length 710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9Q9C026 SSXP5-201ENST00000443473 287 ntBASIC3.24□□□□□ -1.89
TRIM9Q9C026 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.24□□□□□ -1.89
TRIM9Q9C026 VN1R10P-201ENST00000447106 875 ntBASIC3.24□□□□□ -1.89
TRIM9Q9C026 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.24□□□□□ -1.89
TRIM9Q9C026 HMGB1P15-201ENST00000453854 435 ntBASIC3.24□□□□□ -1.89
TRIM9Q9C026 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.24□□□□□ -1.89
TRIM9Q9C026 snoU13.4-201ENST00000458916 104 ntBASIC3.24□□□□□ -1.89
TRIM9Q9C026 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.24□□□□□ -1.89
TRIM9Q9C026 AC020699.1-201ENST00000505161 445 ntBASIC3.24□□□□□ -1.89
TRIM9Q9C026 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.24□□□□□ -1.89
TRIM9Q9C026 RNU1-61P-201ENST00000516107 151 ntBASIC3.24□□□□□ -1.89
TRIM9Q9C026 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.24□□□□□ -1.89
TRIM9Q9C026 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.24□□□□□ -1.89
TRIM9Q9C026 AC005832.3-201ENST00000537929 631 ntBASIC3.24□□□□□ -1.89
TRIM9Q9C026 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.24□□□□□ -1.89
TRIM9Q9C026 AC006329.2-201ENST00000611491 394 ntBASIC3.24□□□□□ -1.89
TRIM9Q9C026 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.24□□□□□ -1.89
TRIM9Q9C026 AC068787.1-201ENST00000623908 691 ntBASIC3.24□□□□□ -1.89
TRIM9Q9C026 SCARNA15.3-201ENST00000626315 122 ntBASIC3.24□□□□□ -1.89
TRIM9Q9C026 SCARNA4.1-201ENST00000628597 123 ntBASIC3.24□□□□□ -1.89
TRIM9Q9C026 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
TRIM9Q9C026 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
TRIM9Q9C026 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TRIM9Q9C026 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TRIM9Q9C026 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TRIM9Q9C026 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.23□□□□□ -1.89
TRIM9Q9C026 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
TRIM9Q9C026 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TRIM9Q9C026 RNU4-92P-201ENST00000363783 136 ntBASIC3.23□□□□□ -1.89
TRIM9Q9C026 Y_RNA.192-201ENST00000363977 102 ntBASIC3.23□□□□□ -1.89
TRIM9Q9C026 RNU6-560P-201ENST00000364007 108 ntBASIC3.23□□□□□ -1.89
TRIM9Q9C026 SNORA9.2-201ENST00000365361 133 ntBASIC3.23□□□□□ -1.89
TRIM9Q9C026 SNORD82-201ENST00000365530 70 ntBASIC3.23□□□□□ -1.89
TRIM9Q9C026 DEFB109C-201ENST00000382575 264 ntBASIC3.23□□□□□ -1.89
TRIM9Q9C026 DEFB109B-201ENST00000382656 264 ntBASIC3.23□□□□□ -1.89
TRIM9Q9C026 U3.26-201ENST00000391236 204 ntBASIC3.23□□□□□ -1.89
TRIM9Q9C026 ARF4P3-201ENST00000397387 509 ntBASIC3.23□□□□□ -1.89
TRIM9Q9C026 RNU4-65P-201ENST00000410473 140 ntBASIC3.23□□□□□ -1.89
TRIM9Q9C026 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.23□□□□□ -1.89
TRIM9Q9C026 AC099677.1-201ENST00000420575 175 ntBASIC3.23□□□□□ -1.89
TRIM9Q9C026 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.23□□□□□ -1.89
TRIM9Q9C026 AC009969.1-201ENST00000438726 172 ntBASIC3.23□□□□□ -1.89
TRIM9Q9C026 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.23□□□□□ -1.89
TRIM9Q9C026 NANOGNBP1-201ENST00000448444 480 ntBASIC3.23□□□□□ -1.89
TRIM9Q9C026 snoU109.4-201ENST00000458953 143 ntBASIC3.23□□□□□ -1.89
TRIM9Q9C026 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.23□□□□□ -1.89
TRIM9Q9C026 RPS3AP14-201ENST00000483907 780 ntBASIC3.23□□□□□ -1.89
TRIM9Q9C026 NUP58P1-201ENST00000502546 1738 ntBASIC3.23□□□□□ -1.89
TRIM9Q9C026 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.23□□□□□ -1.89
TRIM9Q9C026 AC093767.1-201ENST00000504523 156 ntBASIC3.23□□□□□ -1.89
TRIM9Q9C026 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.23□□□□□ -1.89
TRIM9Q9C026 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.23□□□□□ -1.89
TRIM9Q9C026 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.23□□□□□ -1.89
TRIM9Q9C026 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.23□□□□□ -1.89
TRIM9Q9C026 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.23□□□□□ -1.89
TRIM9Q9C026 AP002404.1-201ENST00000532005 451 ntBASIC3.23□□□□□ -1.89
TRIM9Q9C026 AC022080.3-201ENST00000544433 482 ntBASIC3.23□□□□□ -1.89
TRIM9Q9C026 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.23□□□□□ -1.89
TRIM9Q9C026 SNORD84-203ENST00000584275 78 ntBASIC3.23□□□□□ -1.89
TRIM9Q9C026 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.23□□□□□ -1.89
TRIM9Q9C026 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.23□□□□□ -1.89
TRIM9Q9C026 BNIP3P26-201ENST00000600827 554 ntBASIC3.23□□□□□ -1.89
TRIM9Q9C026 DUXAP3-201ENST00000603616 594 ntBASIC3.23□□□□□ -1.89
TRIM9Q9C026 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.23□□□□□ -1.89
TRIM9Q9C026 AL590240.3-201ENST00000621416 943 ntBASIC3.23□□□□□ -1.89
TRIM9Q9C026 AC120349.2-201ENST00000625002 298 ntBASIC3.23□□□□□ -1.89
TRIM9Q9C026 AL136164.4-201ENST00000625013 2135 ntBASIC3.23□□□□□ -1.89
TRIM9Q9C026 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.23□□□□□ -1.89
TRIM9Q9C026 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TRIM9Q9C026 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TRIM9Q9C026 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
TRIM9Q9C026 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
TRIM9Q9C026 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.22□□□□□ -1.89
TRIM9Q9C026 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TRIM9Q9C026 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
TRIM9Q9C026 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
TRIM9Q9C026 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.22□□□□□ -1.89
TRIM9Q9C026 Y_RNA.465-201ENST00000384293 102 ntBASIC3.22□□□□□ -1.89
TRIM9Q9C026 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
TRIM9Q9C026 SNORA48.8-201ENST00000391324 134 ntBASIC3.22□□□□□ -1.89
TRIM9Q9C026 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.22□□□□□ -1.89
TRIM9Q9C026 AC068533.2-201ENST00000411872 306 ntBASIC3.22□□□□□ -1.89
TRIM9Q9C026 NEK4P1-201ENST00000433383 879 ntBASIC3.22□□□□□ -1.89
TRIM9Q9C026 ATP5F1P1-201ENST00000433775 569 ntBASIC3.22□□□□□ -1.89
TRIM9Q9C026 AL590103.1-201ENST00000434488 307 ntBASIC3.22□□□□□ -1.89
TRIM9Q9C026 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.22□□□□□ -1.89
TRIM9Q9C026 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.22□□□□□ -1.89
TRIM9Q9C026 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TRIM9Q9C026 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.22□□□□□ -1.89
TRIM9Q9C026 AC092185.1-201ENST00000491371 97 ntBASIC3.22□□□□□ -1.89
TRIM9Q9C026 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TRIM9Q9C026 AC091951.3-201ENST00000504093 246 ntBASIC3.22□□□□□ -1.89
TRIM9Q9C026 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.22□□□□□ -1.89
TRIM9Q9C026 AC119751.5-201ENST00000514077 770 ntBASIC3.22□□□□□ -1.89
TRIM9Q9C026 RNU6-311P-201ENST00000516224 102 ntBASIC3.22□□□□□ -1.89
TRIM9Q9C026 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.22□□□□□ -1.89
TRIM9Q9C026 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.22□□□□□ -1.89
TRIM9Q9C026 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.22□□□□□ -1.89
TRIM9Q9C026 LARP7P3-201ENST00000579888 337 ntBASIC3.22□□□□□ -1.89
TRIM9Q9C026 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms