Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 ZNF736P4Y-201ENST00000454995 1243 ntBASIC4.52□□□□□ -1.69
CHMP4AQ9BY43 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.52□□□□□ -1.69
CHMP4AQ9BY43 MEMO1P3-201ENST00000459811 302 ntBASIC4.52□□□□□ -1.69
CHMP4AQ9BY43 RPS20P20-201ENST00000460498 340 ntBASIC4.52□□□□□ -1.69
CHMP4AQ9BY43 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.52□□□□□ -1.69
CHMP4AQ9BY43 AC034222.1-201ENST00000494052 532 ntBASIC4.52□□□□□ -1.69
CHMP4AQ9BY43 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CHMP4AQ9BY43 AC119751.4-201ENST00000507498 357 ntBASIC4.52□□□□□ -1.69
CHMP4AQ9BY43 PHBP14-201ENST00000512887 367 ntBASIC4.52□□□□□ -1.69
CHMP4AQ9BY43 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.52□□□□□ -1.69
CHMP4AQ9BY43 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CHMP4AQ9BY43 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.52□□□□□ -1.69
CHMP4AQ9BY43 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.52□□□□□ -1.69
CHMP4AQ9BY43 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.52□□□□□ -1.69
CHMP4AQ9BY43 AL136370.1-201ENST00000608166 691 ntBASIC4.52□□□□□ -1.69
CHMP4AQ9BY43 AC097478.2-201ENST00000610572 514 ntBASIC4.52□□□□□ -1.69
CHMP4AQ9BY43 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.52□□□□□ -1.69
CHMP4AQ9BY43 AC009269.6-201ENST00000621778 588 ntBASIC4.52□□□□□ -1.69
CHMP4AQ9BY43 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CHMP4AQ9BY43 TTN-204ENST00000360870 18218 ntTSL 5 BASIC4.51□□□□□ -1.69
CHMP4AQ9BY43 PABPC1P9-201ENST00000426076 1612 ntBASIC4.51□□□□□ -1.69
CHMP4AQ9BY43 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CHMP4AQ9BY43 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CHMP4AQ9BY43 RNU5E-8P-201ENST00000363502 116 ntBASIC4.51□□□□□ -1.69
CHMP4AQ9BY43 U3.20-201ENST00000390909 217 ntBASIC4.51□□□□□ -1.69
CHMP4AQ9BY43 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.51□□□□□ -1.69
CHMP4AQ9BY43 RNU6-516P-201ENST00000411381 104 ntBASIC4.51□□□□□ -1.69
CHMP4AQ9BY43 Z82210.1-201ENST00000440037 231 ntBASIC4.51□□□□□ -1.69
CHMP4AQ9BY43 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.51□□□□□ -1.69
CHMP4AQ9BY43 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.51□□□□□ -1.69
CHMP4AQ9BY43 RNU7-23P-201ENST00000459465 62 ntBASIC4.51□□□□□ -1.69
CHMP4AQ9BY43 AC005410.1-202ENST00000460347 485 ntBASIC4.51□□□□□ -1.69
CHMP4AQ9BY43 RPS20P22-201ENST00000473700 357 ntBASIC4.51□□□□□ -1.69
CHMP4AQ9BY43 AP001025.2-201ENST00000490908 477 ntBASIC4.51□□□□□ -1.69
CHMP4AQ9BY43 RN7SKP282-201ENST00000516824 299 ntBASIC4.51□□□□□ -1.69
CHMP4AQ9BY43 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.51□□□□□ -1.69
CHMP4AQ9BY43 OR5AP1P-201ENST00000529730 940 ntBASIC4.51□□□□□ -1.69
CHMP4AQ9BY43 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.51□□□□□ -1.69
CHMP4AQ9BY43 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.51□□□□□ -1.69
CHMP4AQ9BY43 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.51□□□□□ -1.69
CHMP4AQ9BY43 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC4.51□□□□□ -1.69
CHMP4AQ9BY43 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.51□□□□□ -1.69
CHMP4AQ9BY43 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.51□□□□□ -1.69
CHMP4AQ9BY43 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.51□□□□□ -1.69
CHMP4AQ9BY43 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.51□□□□□ -1.69
CHMP4AQ9BY43 AC013553.2-201ENST00000604244 589 ntBASIC4.51□□□□□ -1.69
CHMP4AQ9BY43 AL592221.1-201ENST00000605266 382 ntBASIC4.51□□□□□ -1.69
CHMP4AQ9BY43 RNU6-88P-201ENST00000606801 100 ntBASIC4.51□□□□□ -1.69
CHMP4AQ9BY43 AC004832.5-201ENST00000608677 401 ntBASIC4.51□□□□□ -1.69
CHMP4AQ9BY43 AL121652.1-201ENST00000608851 448 ntBASIC4.51□□□□□ -1.69
CHMP4AQ9BY43 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.51□□□□□ -1.69
CHMP4AQ9BY43 AL355365.1-201ENST00000616480 294 ntBASIC4.51□□□□□ -1.69
CHMP4AQ9BY43 AC116618.1-201ENST00000634617 774 ntBASIC4.51□□□□□ -1.69
CHMP4AQ9BY43 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
CHMP4AQ9BY43 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC4.51□□□□□ -1.69
CHMP4AQ9BY43 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CHMP4AQ9BY43 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CHMP4AQ9BY43 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CHMP4AQ9BY43 RNU6-462P-201ENST00000362659 105 ntBASIC4.5□□□□□ -1.69
CHMP4AQ9BY43 Y_RNA.192-201ENST00000363977 102 ntBASIC4.5□□□□□ -1.69
CHMP4AQ9BY43 RNU6-343P-201ENST00000364709 104 ntBASIC4.5□□□□□ -1.69
CHMP4AQ9BY43 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CHMP4AQ9BY43 RNU4-22P-201ENST00000411058 166 ntBASIC4.5□□□□□ -1.69
CHMP4AQ9BY43 HMGN2P30-201ENST00000423237 256 ntBASIC4.5□□□□□ -1.69
CHMP4AQ9BY43 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC4.5□□□□□ -1.69
CHMP4AQ9BY43 YME1L1P1-201ENST00000429435 297 ntBASIC4.5□□□□□ -1.69
CHMP4AQ9BY43 AC005019.1-201ENST00000436455 431 ntBASIC4.5□□□□□ -1.69
CHMP4AQ9BY43 ARPC3P1-201ENST00000437218 533 ntBASIC4.5□□□□□ -1.69
CHMP4AQ9BY43 OR10R1P-201ENST00000441524 1141 ntBASIC4.5□□□□□ -1.69
CHMP4AQ9BY43 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CHMP4AQ9BY43 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.5□□□□□ -1.69
CHMP4AQ9BY43 AL049874.1-201ENST00000489560 388 ntBASIC4.5□□□□□ -1.69
CHMP4AQ9BY43 RNU6-1256P-201ENST00000516539 103 ntBASIC4.5□□□□□ -1.69
CHMP4AQ9BY43 AP003497.1-201ENST00000528472 562 ntBASIC4.5□□□□□ -1.69
CHMP4AQ9BY43 AC004024.1-201ENST00000549244 247 ntBASIC4.5□□□□□ -1.69
CHMP4AQ9BY43 CCNG2P1-201ENST00000549521 1000 ntBASIC4.5□□□□□ -1.69
CHMP4AQ9BY43 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.5□□□□□ -1.69
CHMP4AQ9BY43 DUXAP6-201ENST00000553858 601 ntBASIC4.5□□□□□ -1.69
CHMP4AQ9BY43 NBEAP1-201ENST00000554452 979 ntBASIC4.5□□□□□ -1.69
CHMP4AQ9BY43 AC074050.1-201ENST00000563247 211 ntBASIC4.5□□□□□ -1.69
CHMP4AQ9BY43 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.5□□□□□ -1.69
CHMP4AQ9BY43 AL160237.3-201ENST00000604114 1013 ntBASIC4.5□□□□□ -1.69
CHMP4AQ9BY43 AL139022.2-201ENST00000606934 443 ntBASIC4.5□□□□□ -1.69
CHMP4AQ9BY43 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.5□□□□□ -1.69
CHMP4AQ9BY43 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.5□□□□□ -1.69
CHMP4AQ9BY43 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.5□□□□□ -1.69
CHMP4AQ9BY43 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CHMP4AQ9BY43 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CHMP4AQ9BY43 Z83843.1-201ENST00000604070 3685 ntBASIC4.49□□□□□ -1.69
CHMP4AQ9BY43 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CHMP4AQ9BY43 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
CHMP4AQ9BY43 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CHMP4AQ9BY43 RNU6-925P-201ENST00000384629 104 ntBASIC4.49□□□□□ -1.69
CHMP4AQ9BY43 MIR183-201ENST00000384958 110 ntBASIC4.49□□□□□ -1.69
CHMP4AQ9BY43 MIR34B-201ENST00000385076 84 ntBASIC4.49□□□□□ -1.69
CHMP4AQ9BY43 RSL24D1P1-201ENST00000404972 493 ntBASIC4.49□□□□□ -1.69
CHMP4AQ9BY43 AL354692.1-201ENST00000423044 315 ntBASIC4.49□□□□□ -1.69
CHMP4AQ9BY43 AL451062.2-201ENST00000427515 271 ntBASIC4.49□□□□□ -1.69
CHMP4AQ9BY43 ATP5JP1-201ENST00000431631 322 ntBASIC4.49□□□□□ -1.69
CHMP4AQ9BY43 OR4K11P-201ENST00000431829 904 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms