Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 RNU6-264P-201ENST00000517134 104 ntBASIC5.29□□□□□ -1.56
TRIM56Q9BRZ2 IGLV2-28-201ENST00000520681 304 ntBASIC5.29□□□□□ -1.56
TRIM56Q9BRZ2 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC5.29□□□□□ -1.56
TRIM56Q9BRZ2 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.29□□□□□ -1.56
TRIM56Q9BRZ2 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC5.29□□□□□ -1.56
TRIM56Q9BRZ2 OR1F2P-201ENST00000570470 933 ntBASIC5.29□□□□□ -1.56
TRIM56Q9BRZ2 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
TRIM56Q9BRZ2 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.29□□□□□ -1.56
TRIM56Q9BRZ2 AL355365.1-201ENST00000616480 294 ntBASIC5.29□□□□□ -1.56
TRIM56Q9BRZ2 AL162373.1-201ENST00000620433 407 ntBASIC5.29□□□□□ -1.56
TRIM56Q9BRZ2 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.29□□□□□ -1.56
TRIM56Q9BRZ2 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.29□□□□□ -1.56
TRIM56Q9BRZ2 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.29□□□□□ -1.56
TRIM56Q9BRZ2 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.29□□□□□ -1.56
TRIM56Q9BRZ2 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.29□□□□□ -1.56
TRIM56Q9BRZ2 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 AC006484.1-201ENST00000435086 1884 ntBASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 RNU6-562P-201ENST00000362731 107 ntBASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 SNORA70E-201ENST00000384492 135 ntBASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 MIR105-1-201ENST00000385222 81 ntBASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 RNA5SP339-201ENST00000390987 122 ntBASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 AC013442.1-201ENST00000397347 228 ntBASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 AL391219.1-201ENST00000422570 483 ntBASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 USP9YP16-201ENST00000430287 407 ntBASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 RPL7P28-201ENST00000437739 740 ntBASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 RPL7AP61-201ENST00000443410 636 ntBASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 RPS15AP27-201ENST00000449183 343 ntBASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 AL162389.1-201ENST00000449233 177 ntBASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 IGHV5-78-201ENST00000450948 295 ntBASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 USP9YP23-201ENST00000455085 407 ntBASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 RPL12P25-201ENST00000455592 494 ntBASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 RPL37P6-202ENST00000464216 403 ntBASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 RPL21P93-201ENST00000480465 489 ntBASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 RNU6-513P-201ENST00000516104 104 ntBASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 RNU6-1271P-201ENST00000517049 105 ntBASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 RNU6-1213P-201ENST00000517075 94 ntBASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 TVP23CP2-201ENST00000571473 623 ntBASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 RN7SL708P-201ENST00000580952 299 ntBASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 BNIP3P16-201ENST00000589779 534 ntBASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 AC211433.2-201ENST00000608433 387 ntBASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 U2.17-201ENST00000611454 95 ntBASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 AC011890.2-201ENST00000613393 294 ntBASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 ATP5A1P2-202ENST00000616464 443 ntBASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 MIR8080-201ENST00000622224 89 ntBASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 AC018445.2-201ENST00000622987 260 ntBASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 AC022893.2-201ENST00000564832 3296 ntBASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.28□□□□□ -1.56
TRIM56Q9BRZ2 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 AL731532.2-201ENST00000623542 1953 ntBASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 XIAPP3-201ENST00000312918 795 ntBASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 Y_RNA.80-201ENST00000362996 102 ntBASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 RNU6-890P-201ENST00000384121 107 ntBASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 Y_RNA.527-201ENST00000384573 102 ntBASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 RNU6-1127P-201ENST00000384580 107 ntBASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 HSPA8P15-201ENST00000401676 786 ntBASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 U3.32-201ENST00000408116 212 ntBASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 AC096644.2-201ENST00000429278 159 ntBASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 RPL21P112-201ENST00000434403 463 ntBASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 CYCSP6-201ENST00000434498 302 ntBASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 MTCO3P45-201ENST00000443036 613 ntBASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 RPL29P29-201ENST00000448725 423 ntBASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 AC007967.1-201ENST00000455422 1159 ntBASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 AC128713.1-201ENST00000471495 306 ntBASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms