Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.68□□□□□ -1.5
USB1Q9BQ65 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
USB1Q9BQ65 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
USB1Q9BQ65 AL731532.2-201ENST00000623542 1953 ntBASIC5.68□□□□□ -1.5
USB1Q9BQ65 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.68□□□□□ -1.5
USB1Q9BQ65 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.68□□□□□ -1.5
USB1Q9BQ65 SNORD16-201ENST00000362803 99 ntBASIC5.68□□□□□ -1.5
USB1Q9BQ65 RNU6-882P-201ENST00000391025 103 ntBASIC5.68□□□□□ -1.5
USB1Q9BQ65 AL158156.1-201ENST00000422509 473 ntBASIC5.68□□□□□ -1.5
USB1Q9BQ65 TOMM20P4-201ENST00000427861 435 ntBASIC5.68□□□□□ -1.5
USB1Q9BQ65 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.68□□□□□ -1.5
USB1Q9BQ65 AL451136.1-201ENST00000435399 325 ntBASIC5.68□□□□□ -1.5
USB1Q9BQ65 RN7SL39P-201ENST00000462264 297 ntBASIC5.68□□□□□ -1.5
USB1Q9BQ65 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.68□□□□□ -1.5
USB1Q9BQ65 RNY3P16-201ENST00000516338 101 ntBASIC5.68□□□□□ -1.5
USB1Q9BQ65 RN7SKP272-201ENST00000516988 232 ntBASIC5.68□□□□□ -1.5
USB1Q9BQ65 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.68□□□□□ -1.5
USB1Q9BQ65 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.68□□□□□ -1.5
USB1Q9BQ65 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC5.68□□□□□ -1.5
USB1Q9BQ65 BNIP3P5-201ENST00000562290 498 ntBASIC5.68□□□□□ -1.5
USB1Q9BQ65 AC023575.1-201ENST00000580510 358 ntBASIC5.68□□□□□ -1.5
USB1Q9BQ65 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.68□□□□□ -1.5
USB1Q9BQ65 AL139395.1-201ENST00000603662 160 ntBASIC5.68□□□□□ -1.5
USB1Q9BQ65 MIR6780B-201ENST00000610307 79 ntBASIC5.68□□□□□ -1.5
USB1Q9BQ65 AL354718.1-201ENST00000619764 589 ntBASIC5.68□□□□□ -1.5
USB1Q9BQ65 AP001264.1-201ENST00000620602 703 ntBASIC5.68□□□□□ -1.5
USB1Q9BQ65 LINC02495-203ENST00000636704 242 ntBASIC5.68□□□□□ -1.5
USB1Q9BQ65 AP005432.1-201ENST00000580891 3485 ntBASIC5.68□□□□□ -1.5
USB1Q9BQ65 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
USB1Q9BQ65 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
USB1Q9BQ65 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
USB1Q9BQ65 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
USB1Q9BQ65 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
USB1Q9BQ65 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
USB1Q9BQ65 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
USB1Q9BQ65 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.67□□□□□ -1.5
USB1Q9BQ65 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.67□□□□□ -1.5
USB1Q9BQ65 TNPO1P2-201ENST00000426249 2665 ntBASIC5.67□□□□□ -1.5
USB1Q9BQ65 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
USB1Q9BQ65 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC5.67□□□□□ -1.5
USB1Q9BQ65 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
USB1Q9BQ65 SNORD116-18-201ENST00000383961 92 ntBASIC5.67□□□□□ -1.5
USB1Q9BQ65 SNORA36C-201ENST00000384289 132 ntBASIC5.67□□□□□ -1.5
USB1Q9BQ65 AL513331.1-201ENST00000411908 397 ntBASIC5.67□□□□□ -1.5
USB1Q9BQ65 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC5.67□□□□□ -1.5
USB1Q9BQ65 MTCO1P39-201ENST00000426148 480 ntBASIC5.67□□□□□ -1.5
USB1Q9BQ65 RPS6P12-201ENST00000432491 726 ntBASIC5.67□□□□□ -1.5
USB1Q9BQ65 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.67□□□□□ -1.5
USB1Q9BQ65 Z82188.1-201ENST00000436709 154 ntBASIC5.67□□□□□ -1.5
USB1Q9BQ65 CEACAMP7-201ENST00000444105 496 ntBASIC5.67□□□□□ -1.5
USB1Q9BQ65 AC106800.3-201ENST00000511389 308 ntBASIC5.67□□□□□ -1.5
USB1Q9BQ65 OR7H2P-201ENST00000513483 306 ntBASIC5.67□□□□□ -1.5
USB1Q9BQ65 IGHV4-55-201ENST00000520889 368 ntBASIC5.67□□□□□ -1.5
USB1Q9BQ65 IGLV3-6-201ENST00000523937 250 ntBASIC5.67□□□□□ -1.5
USB1Q9BQ65 ATP5F1P5-201ENST00000526403 760 ntBASIC5.67□□□□□ -1.5
USB1Q9BQ65 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.67□□□□□ -1.5
USB1Q9BQ65 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.67□□□□□ -1.5
USB1Q9BQ65 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.67□□□□□ -1.5
USB1Q9BQ65 AL365222.1-201ENST00000614661 98 ntBASIC5.67□□□□□ -1.5
USB1Q9BQ65 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
USB1Q9BQ65 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
USB1Q9BQ65 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
USB1Q9BQ65 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
USB1Q9BQ65 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
USB1Q9BQ65 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
USB1Q9BQ65 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
USB1Q9BQ65 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC5.67□□□□□ -1.5
USB1Q9BQ65 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
USB1Q9BQ65 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
USB1Q9BQ65 AC010624.4-201ENST00000597606 1351 ntBASIC5.67□□□□□ -1.5
USB1Q9BQ65 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
USB1Q9BQ65 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.66□□□□□ -1.5
USB1Q9BQ65 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.66□□□□□ -1.5
USB1Q9BQ65 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
USB1Q9BQ65 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
USB1Q9BQ65 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.66□□□□□ -1.5
USB1Q9BQ65 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
USB1Q9BQ65 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.66□□□□□ -1.5
USB1Q9BQ65 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
USB1Q9BQ65 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
USB1Q9BQ65 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
USB1Q9BQ65 OR9K1P-202ENST00000641111 3217 ntBASIC5.66□□□□□ -1.5
USB1Q9BQ65 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
USB1Q9BQ65 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
USB1Q9BQ65 MIR133A2-201ENST00000347538 102 ntBASIC5.66□□□□□ -1.5
USB1Q9BQ65 RNU6-222P-201ENST00000362438 107 ntBASIC5.66□□□□□ -1.5
USB1Q9BQ65 Y_RNA.308-201ENST00000365043 101 ntBASIC5.66□□□□□ -1.5
USB1Q9BQ65 RNU6-21P-201ENST00000384710 107 ntBASIC5.66□□□□□ -1.5
USB1Q9BQ65 AP003170.5-201ENST00000397185 335 ntBASIC5.66□□□□□ -1.5
USB1Q9BQ65 HSPA8P15-201ENST00000401676 786 ntBASIC5.66□□□□□ -1.5
USB1Q9BQ65 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.66□□□□□ -1.5
USB1Q9BQ65 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.66□□□□□ -1.5
USB1Q9BQ65 snoU13.30-201ENST00000458951 104 ntBASIC5.66□□□□□ -1.5
USB1Q9BQ65 AC007998.1-201ENST00000474156 672 ntBASIC5.66□□□□□ -1.5
USB1Q9BQ65 RPL30P1-201ENST00000488676 339 ntBASIC5.66□□□□□ -1.5
USB1Q9BQ65 AC140059.1-201ENST00000489238 361 ntBASIC5.66□□□□□ -1.5
USB1Q9BQ65 AP000859.1-201ENST00000525536 307 ntBASIC5.66□□□□□ -1.5
USB1Q9BQ65 AC005476.1-201ENST00000554427 397 ntBASIC5.66□□□□□ -1.5
USB1Q9BQ65 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.66□□□□□ -1.5
USB1Q9BQ65 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms