Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 AC073476.4-201ENST00000628409 72 ntBASIC3.39□□□□□ -1.87
CPNE1Q99829 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CPNE1Q99829 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CPNE1Q99829 MTND4P16-201ENST00000466108 1367 ntBASIC3.38□□□□□ -1.87
CPNE1Q99829 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
CPNE1Q99829 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CPNE1Q99829 AF127577.6-201ENST00000623352 2191 ntBASIC3.38□□□□□ -1.87
CPNE1Q99829 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CPNE1Q99829 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CPNE1Q99829 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
CPNE1Q99829 RNU6-1078P-201ENST00000364522 103 ntBASIC3.38□□□□□ -1.87
CPNE1Q99829 RNU6-660P-201ENST00000364566 109 ntBASIC3.38□□□□□ -1.87
CPNE1Q99829 SNORA73.2-201ENST00000364946 201 ntBASIC3.38□□□□□ -1.87
CPNE1Q99829 RNU6-805P-201ENST00000365643 106 ntBASIC3.38□□□□□ -1.87
CPNE1Q99829 U3.20-201ENST00000390909 217 ntBASIC3.38□□□□□ -1.87
CPNE1Q99829 RN7SKP263-201ENST00000411194 309 ntBASIC3.38□□□□□ -1.87
CPNE1Q99829 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.38□□□□□ -1.87
CPNE1Q99829 RPS15AP6-201ENST00000420703 385 ntBASIC3.38□□□□□ -1.87
CPNE1Q99829 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.38□□□□□ -1.87
CPNE1Q99829 BX890604.2-201ENST00000427883 474 ntBASIC3.38□□□□□ -1.87
CPNE1Q99829 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.38□□□□□ -1.87
CPNE1Q99829 UBE2V1P13-201ENST00000436983 439 ntBASIC3.38□□□□□ -1.87
CPNE1Q99829 HMGB3P11-201ENST00000440127 604 ntBASIC3.38□□□□□ -1.87
CPNE1Q99829 AL662791.1-201ENST00000441992 928 ntBASIC3.38□□□□□ -1.87
CPNE1Q99829 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.38□□□□□ -1.87
CPNE1Q99829 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.38□□□□□ -1.87
CPNE1Q99829 OR6K1P-201ENST00000456766 971 ntBASIC3.38□□□□□ -1.87
CPNE1Q99829 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.38□□□□□ -1.87
CPNE1Q99829 SNRPGP3-201ENST00000469405 227 ntBASIC3.38□□□□□ -1.87
CPNE1Q99829 BZW1P2-201ENST00000473537 826 ntBASIC3.38□□□□□ -1.87
CPNE1Q99829 RPL30P6-201ENST00000475925 342 ntBASIC3.38□□□□□ -1.87
CPNE1Q99829 AC010486.2-201ENST00000505572 483 ntBASIC3.38□□□□□ -1.87
CPNE1Q99829 AC105914.1-201ENST00000511798 226 ntBASIC3.38□□□□□ -1.87
CPNE1Q99829 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.38□□□□□ -1.87
CPNE1Q99829 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.38□□□□□ -1.87
CPNE1Q99829 SNORA64.4-201ENST00000516632 81 ntBASIC3.38□□□□□ -1.87
CPNE1Q99829 AC103843.2-201ENST00000530523 682 ntBASIC3.38□□□□□ -1.87
CPNE1Q99829 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.38□□□□□ -1.87
CPNE1Q99829 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.38□□□□□ -1.87
CPNE1Q99829 AC022146.1-201ENST00000595307 847 ntBASIC3.38□□□□□ -1.87
CPNE1Q99829 AL158211.4-201ENST00000606988 584 ntBASIC3.38□□□□□ -1.87
CPNE1Q99829 AC107214.2-201ENST00000608204 634 ntBASIC3.38□□□□□ -1.87
CPNE1Q99829 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.38□□□□□ -1.87
CPNE1Q99829 AC103710.4-201ENST00000609301 899 ntBASIC3.38□□□□□ -1.87
CPNE1Q99829 AL136295.6-201ENST00000610486 658 ntBASIC3.38□□□□□ -1.87
CPNE1Q99829 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.38□□□□□ -1.87
CPNE1Q99829 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.38□□□□□ -1.87
CPNE1Q99829 SNORD39.4-201ENST00000620099 78 ntBASIC3.38□□□□□ -1.87
CPNE1Q99829 AP000676.3-201ENST00000623299 569 ntBASIC3.38□□□□□ -1.87
CPNE1Q99829 AC095031.1-201ENST00000623685 672 ntBASIC3.38□□□□□ -1.87
CPNE1Q99829 AC079597.1-201ENST00000624306 508 ntBASIC3.38□□□□□ -1.87
CPNE1Q99829 AC068724.3-201ENST00000625906 87 ntBASIC3.38□□□□□ -1.87
CPNE1Q99829 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CPNE1Q99829 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CPNE1Q99829 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.38□□□□□ -1.87
CPNE1Q99829 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.37□□□□□ -1.87
CPNE1Q99829 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
CPNE1Q99829 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.37□□□□□ -1.87
CPNE1Q99829 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CPNE1Q99829 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
CPNE1Q99829 AP001148.1-201ENST00000624124 2359 ntBASIC3.37□□□□□ -1.87
CPNE1Q99829 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
CPNE1Q99829 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CPNE1Q99829 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CPNE1Q99829 RNA5SP383-201ENST00000362934 120 ntBASIC3.37□□□□□ -1.87
CPNE1Q99829 RN7SKP227-201ENST00000364445 330 ntBASIC3.37□□□□□ -1.87
CPNE1Q99829 RNU6-769P-201ENST00000384407 104 ntBASIC3.37□□□□□ -1.87
CPNE1Q99829 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.37□□□□□ -1.87
CPNE1Q99829 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.37□□□□□ -1.87
CPNE1Q99829 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.37□□□□□ -1.87
CPNE1Q99829 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.37□□□□□ -1.87
CPNE1Q99829 MTATP6P17-201ENST00000431030 672 ntBASIC3.37□□□□□ -1.87
CPNE1Q99829 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.37□□□□□ -1.87
CPNE1Q99829 TXNP1-201ENST00000441872 371 ntBASIC3.37□□□□□ -1.87
CPNE1Q99829 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.37□□□□□ -1.87
CPNE1Q99829 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.37□□□□□ -1.87
CPNE1Q99829 VN1R104P-201ENST00000505115 1009 ntBASIC3.37□□□□□ -1.87
CPNE1Q99829 HMGB3P15-201ENST00000507326 574 ntBASIC3.37□□□□□ -1.87
CPNE1Q99829 AC005178.1-201ENST00000508392 440 ntBASIC3.37□□□□□ -1.87
CPNE1Q99829 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CPNE1Q99829 AC026801.2-201ENST00000515352 425 ntBASIC3.37□□□□□ -1.87
CPNE1Q99829 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.37□□□□□ -1.87
CPNE1Q99829 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.37□□□□□ -1.87
CPNE1Q99829 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.37□□□□□ -1.87
CPNE1Q99829 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.37□□□□□ -1.87
CPNE1Q99829 MED28P6-201ENST00000558776 231 ntBASIC3.37□□□□□ -1.87
CPNE1Q99829 MIR3160-1-201ENST00000577972 85 ntBASIC3.37□□□□□ -1.87
CPNE1Q99829 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.37□□□□□ -1.87
CPNE1Q99829 AP001429.1-201ENST00000602568 530 ntBASIC3.37□□□□□ -1.87
CPNE1Q99829 AC106028.5-201ENST00000610332 395 ntBASIC3.37□□□□□ -1.87
CPNE1Q99829 AC122133.1-201ENST00000613964 233 ntBASIC3.37□□□□□ -1.87
CPNE1Q99829 Z99129.2-201ENST00000619967 314 ntBASIC3.37□□□□□ -1.87
CPNE1Q99829 AC009812.4-201ENST00000569134 1805 ntBASIC3.37□□□□□ -1.87
CPNE1Q99829 AL356274.2-201ENST00000624379 3752 ntBASIC3.37□□□□□ -1.87
CPNE1Q99829 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.36□□□□□ -1.87
CPNE1Q99829 CR383658.2-201ENST00000547576 1525 ntBASIC3.36□□□□□ -1.87
CPNE1Q99829 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.36□□□□□ -1.87
CPNE1Q99829 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.36□□□□□ -1.87
CPNE1Q99829 Y_RNA.169-201ENST00000363745 96 ntBASIC3.36□□□□□ -1.87
CPNE1Q99829 RN7SKP280-201ENST00000364196 304 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 154.9 ms