Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 MOB1AP2-201ENST00000446060 614 ntBASIC2.7□□□□□ -1.98
CDX2Q99626 AL034418.1-201ENST00000448675 860 ntBASIC2.7□□□□□ -1.98
CDX2Q99626 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.7□□□□□ -1.98
CDX2Q99626 RNU7-140P-201ENST00000459546 60 ntBASIC2.7□□□□□ -1.98
CDX2Q99626 AL049829.1-201ENST00000465411 156 ntBASIC2.7□□□□□ -1.98
CDX2Q99626 HMGB1P38-201ENST00000490557 577 ntBASIC2.7□□□□□ -1.98
CDX2Q99626 RNF138P1-201ENST00000502765 546 ntBASIC2.7□□□□□ -1.98
CDX2Q99626 MTCO2P9-201ENST00000503214 694 ntBASIC2.7□□□□□ -1.98
CDX2Q99626 HMGB1P22-201ENST00000505315 124 ntBASIC2.7□□□□□ -1.98
CDX2Q99626 AC234781.5-201ENST00000508429 271 ntBASIC2.7□□□□□ -1.98
CDX2Q99626 AC117522.2-201ENST00000510049 657 ntBASIC2.7□□□□□ -1.98
CDX2Q99626 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CDX2Q99626 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.7□□□□□ -1.98
CDX2Q99626 RNA5SP281-201ENST00000516504 135 ntBASIC2.7□□□□□ -1.98
CDX2Q99626 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.7□□□□□ -1.98
CDX2Q99626 AP000790.1-201ENST00000528891 737 ntBASIC2.7□□□□□ -1.98
CDX2Q99626 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.7□□□□□ -1.98
CDX2Q99626 OR4G1P-201ENST00000588632 938 ntBASIC2.7□□□□□ -1.98
CDX2Q99626 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.7□□□□□ -1.98
CDX2Q99626 AC068313.1-201ENST00000604028 1008 ntBASIC2.7□□□□□ -1.98
CDX2Q99626 AC026741.1-201ENST00000605892 482 ntBASIC2.7□□□□□ -1.98
CDX2Q99626 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CDX2Q99626 AL390240.1-201ENST00000612950 384 ntBASIC2.7□□□□□ -1.98
CDX2Q99626 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
CDX2Q99626 AC093875.1-201ENST00000623688 504 ntBASIC2.7□□□□□ -1.98
CDX2Q99626 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.7□□□□□ -1.98
CDX2Q99626 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.7□□□□□ -1.98
CDX2Q99626 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CDX2Q99626 AL355578.1-201ENST00000607405 1328 ntBASIC2.69□□□□□ -1.98
CDX2Q99626 SGO1P1-201ENST00000603525 1447 ntBASIC2.69□□□□□ -1.98
CDX2Q99626 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CDX2Q99626 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
CDX2Q99626 AC002546.1-201ENST00000588041 2504 ntBASIC2.69□□□□□ -1.98
CDX2Q99626 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
CDX2Q99626 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CDX2Q99626 RNU6-353P-201ENST00000364266 108 ntBASIC2.69□□□□□ -1.98
CDX2Q99626 DYNLT3P1-201ENST00000378574 347 ntBASIC2.69□□□□□ -1.98
CDX2Q99626 SNORA64-201ENST00000384674 134 ntBASIC2.69□□□□□ -1.98
CDX2Q99626 AP002784.2-201ENST00000397300 549 ntBASIC2.69□□□□□ -1.98
CDX2Q99626 SFR1P1-201ENST00000403720 688 ntBASIC2.69□□□□□ -1.98
CDX2Q99626 BTF3P7-201ENST00000407097 488 ntBASIC2.69□□□□□ -1.98
CDX2Q99626 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC2.69□□□□□ -1.98
CDX2Q99626 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
CDX2Q99626 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.69□□□□□ -1.98
CDX2Q99626 AC027644.1-201ENST00000419595 298 ntBASIC2.69□□□□□ -1.98
CDX2Q99626 AC006960.1-201ENST00000419980 153 ntBASIC2.69□□□□□ -1.98
CDX2Q99626 MTCO2P1-201ENST00000424648 477 ntBASIC2.69□□□□□ -1.98
CDX2Q99626 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.69□□□□□ -1.98
CDX2Q99626 RPL21P66-201ENST00000426566 466 ntBASIC2.69□□□□□ -1.98
CDX2Q99626 FO393414.1-201ENST00000428697 1184 ntBASIC2.69□□□□□ -1.98
CDX2Q99626 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.69□□□□□ -1.98
CDX2Q99626 GXYLT1P1-201ENST00000446657 490 ntBASIC2.69□□□□□ -1.98
CDX2Q99626 OR51B8P-201ENST00000449892 769 ntBASIC2.69□□□□□ -1.98
CDX2Q99626 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.69□□□□□ -1.98
CDX2Q99626 RPL21P18-201ENST00000469899 480 ntBASIC2.69□□□□□ -1.98
CDX2Q99626 AC003982.1-202ENST00000469928 248 ntBASIC2.69□□□□□ -1.98
CDX2Q99626 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.69□□□□□ -1.98
CDX2Q99626 AC112518.2-201ENST00000508565 425 ntBASIC2.69□□□□□ -1.98
CDX2Q99626 MTCO2P32-201ENST00000514865 403 ntBASIC2.69□□□□□ -1.98
CDX2Q99626 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.69□□□□□ -1.98
CDX2Q99626 AC104115.2-201ENST00000523026 687 ntBASIC2.69□□□□□ -1.98
CDX2Q99626 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.69□□□□□ -1.98
CDX2Q99626 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.69□□□□□ -1.98
CDX2Q99626 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.69□□□□□ -1.98
CDX2Q99626 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.69□□□□□ -1.98
CDX2Q99626 AL391813.2-201ENST00000609113 322 ntBASIC2.69□□□□□ -1.98
CDX2Q99626 AL355493.4-201ENST00000618530 292 ntBASIC2.69□□□□□ -1.98
CDX2Q99626 AC068880.4-201ENST00000623082 495 ntBASIC2.69□□□□□ -1.98
CDX2Q99626 AL121594.5-201ENST00000631724 573 ntBASIC2.69□□□□□ -1.98
CDX2Q99626 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.69□□□□□ -1.98
CDX2Q99626 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.69□□□□□ -1.98
CDX2Q99626 API5P2-201ENST00000397055 1498 ntBASIC2.69□□□□□ -1.98
CDX2Q99626 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.69□□□□□ -1.98
CDX2Q99626 AC004972.1-201ENST00000623934 2209 ntBASIC2.69□□□□□ -1.98
CDX2Q99626 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.69□□□□□ -1.98
CDX2Q99626 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CDX2Q99626 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CDX2Q99626 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CDX2Q99626 RNU6-207P-201ENST00000384137 107 ntBASIC2.68□□□□□ -1.98
CDX2Q99626 RNU6-441P-201ENST00000384545 106 ntBASIC2.68□□□□□ -1.98
CDX2Q99626 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CDX2Q99626 AC073264.1-201ENST00000411508 416 ntBASIC2.68□□□□□ -1.98
CDX2Q99626 HSPE1P1-201ENST00000421494 318 ntBASIC2.68□□□□□ -1.98
CDX2Q99626 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC2.68□□□□□ -1.98
CDX2Q99626 AC114973.1-201ENST00000429057 632 ntBASIC2.68□□□□□ -1.98
CDX2Q99626 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CDX2Q99626 AC002542.1-201ENST00000440683 193 ntBASIC2.68□□□□□ -1.98
CDX2Q99626 ZNF736P11Y-201ENST00000442535 1213 ntBASIC2.68□□□□□ -1.98
CDX2Q99626 ZNF736P12Y-201ENST00000443152 1243 ntBASIC2.68□□□□□ -1.98
CDX2Q99626 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.68□□□□□ -1.98
CDX2Q99626 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC2.68□□□□□ -1.98
CDX2Q99626 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2.68□□□□□ -1.98
CDX2Q99626 MTND4P2-201ENST00000507767 1203 ntBASIC2.68□□□□□ -1.98
CDX2Q99626 RNU6-1073P-201ENST00000517182 106 ntBASIC2.68□□□□□ -1.98
CDX2Q99626 IGKV2D-36-201ENST00000518643 226 ntBASIC2.68□□□□□ -1.98
CDX2Q99626 AC068657.1-201ENST00000520807 306 ntBASIC2.68□□□□□ -1.98
CDX2Q99626 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.68□□□□□ -1.98
CDX2Q99626 OR8K4P-201ENST00000534608 872 ntBASIC2.68□□□□□ -1.98
CDX2Q99626 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.68□□□□□ -1.98
CDX2Q99626 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms