Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
HPS3Q969F9 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.47□□□□□ -1.69
HPS3Q969F9 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.69
HPS3Q969F9 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
HPS3Q969F9 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
HPS3Q969F9 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HPS3Q969F9 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.46□□□□□ -1.7
HPS3Q969F9 RNY1P12-201ENST00000364251 105 ntBASIC4.46□□□□□ -1.7
HPS3Q969F9 RNY4P16-201ENST00000364768 94 ntBASIC4.46□□□□□ -1.7
HPS3Q969F9 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
HPS3Q969F9 MIR19A-201ENST00000384878 82 ntBASIC4.46□□□□□ -1.7
HPS3Q969F9 AC004552.1-201ENST00000419089 348 ntBASIC4.46□□□□□ -1.7
HPS3Q969F9 RPS15AP12-201ENST00000419498 388 ntBASIC4.46□□□□□ -1.7
HPS3Q969F9 AC019097.1-201ENST00000424783 735 ntBASIC4.46□□□□□ -1.7
HPS3Q969F9 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.46□□□□□ -1.7
HPS3Q969F9 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.46□□□□□ -1.7
HPS3Q969F9 DNAJC19P4-201ENST00000440115 345 ntBASIC4.46□□□□□ -1.7
HPS3Q969F9 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.46□□□□□ -1.7
HPS3Q969F9 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.46□□□□□ -1.7
HPS3Q969F9 NDUFAF4P4-201ENST00000454883 502 ntBASIC4.46□□□□□ -1.7
HPS3Q969F9 MTND1P12-201ENST00000455231 147 ntBASIC4.46□□□□□ -1.7
HPS3Q969F9 MTCO2P29-201ENST00000465212 189 ntBASIC4.46□□□□□ -1.7
HPS3Q969F9 RPS26P3-201ENST00000470205 348 ntBASIC4.46□□□□□ -1.7
HPS3Q969F9 AC090543.2-201ENST00000483963 348 ntBASIC4.46□□□□□ -1.7
HPS3Q969F9 AC004057.1-201ENST00000485827 348 ntBASIC4.46□□□□□ -1.7
HPS3Q969F9 SLC25A15P5-201ENST00000508033 253 ntBASIC4.46□□□□□ -1.7
HPS3Q969F9 AC022483.1-201ENST00000514020 567 ntBASIC4.46□□□□□ -1.7
HPS3Q969F9 RNU6-506P-201ENST00000516553 94 ntBASIC4.46□□□□□ -1.7
HPS3Q969F9 MTND1P5-201ENST00000517906 940 ntBASIC4.46□□□□□ -1.7
HPS3Q969F9 AP004371.1-201ENST00000525240 214 ntBASIC4.46□□□□□ -1.7
HPS3Q969F9 AP000857.1-201ENST00000532151 543 ntBASIC4.46□□□□□ -1.7
HPS3Q969F9 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.46□□□□□ -1.7
HPS3Q969F9 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.46□□□□□ -1.7
HPS3Q969F9 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.46□□□□□ -1.7
HPS3Q969F9 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.46□□□□□ -1.7
HPS3Q969F9 AC136619.2-201ENST00000563361 631 ntBASIC4.46□□□□□ -1.7
HPS3Q969F9 AC012182.1-201ENST00000570133 895 ntBASIC4.46□□□□□ -1.7
HPS3Q969F9 AC093227.2-201ENST00000589357 285 ntBASIC4.46□□□□□ -1.7
HPS3Q969F9 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.46□□□□□ -1.7
HPS3Q969F9 BNIP3P33-201ENST00000598912 569 ntBASIC4.46□□□□□ -1.7
HPS3Q969F9 XIAPP1-201ENST00000603162 600 ntBASIC4.46□□□□□ -1.7
HPS3Q969F9 AC104662.1-201ENST00000604448 511 ntBASIC4.46□□□□□ -1.7
HPS3Q969F9 AL591034.3-201ENST00000605511 685 ntBASIC4.46□□□□□ -1.7
HPS3Q969F9 AL391813.2-201ENST00000609113 322 ntBASIC4.46□□□□□ -1.7
HPS3Q969F9 uc_338.32-201ENST00000615087 172 ntBASIC4.46□□□□□ -1.7
HPS3Q969F9 AC136475.10-201ENST00000620253 385 ntBASIC4.46□□□□□ -1.7
HPS3Q969F9 AL732618.1-201ENST00000623251 301 ntBASIC4.46□□□□□ -1.7
HPS3Q969F9 AC068880.5-201ENST00000624331 290 ntBASIC4.46□□□□□ -1.7
HPS3Q969F9 SEPT14P19-203ENST00000633205 211 ntBASIC4.46□□□□□ -1.7
HPS3Q969F9 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
HPS3Q969F9 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HPS3Q969F9 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.46□□□□□ -1.7
HPS3Q969F9 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HPS3Q969F9 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.46□□□□□ -1.7
HPS3Q969F9 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
HPS3Q969F9 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HPS3Q969F9 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.45□□□□□ -1.7
HPS3Q969F9 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
HPS3Q969F9 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HPS3Q969F9 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HPS3Q969F9 RNU6-223P-201ENST00000362830 107 ntBASIC4.45□□□□□ -1.7
HPS3Q969F9 RNU6-335P-201ENST00000364563 113 ntBASIC4.45□□□□□ -1.7
HPS3Q969F9 RNU1-64P-201ENST00000365443 163 ntBASIC4.45□□□□□ -1.7
HPS3Q969F9 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
HPS3Q969F9 RPS26P8-201ENST00000393490 348 ntBASIC4.45□□□□□ -1.7
HPS3Q969F9 GSTA9P-201ENST00000406231 611 ntBASIC4.45□□□□□ -1.7
HPS3Q969F9 RAD23BP2-201ENST00000416003 1207 ntBASIC4.45□□□□□ -1.7
HPS3Q969F9 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.45□□□□□ -1.7
HPS3Q969F9 AC092832.1-201ENST00000422934 400 ntBASIC4.45□□□□□ -1.7
HPS3Q969F9 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.45□□□□□ -1.7
HPS3Q969F9 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.45□□□□□ -1.7
HPS3Q969F9 MTND3P21-201ENST00000433774 331 ntBASIC4.45□□□□□ -1.7
HPS3Q969F9 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.45□□□□□ -1.7
HPS3Q969F9 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.45□□□□□ -1.7
HPS3Q969F9 HMGB3P30-201ENST00000457863 606 ntBASIC4.45□□□□□ -1.7
HPS3Q969F9 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.45□□□□□ -1.7
HPS3Q969F9 AC091153.1-201ENST00000466297 402 ntBASIC4.45□□□□□ -1.7
HPS3Q969F9 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.45□□□□□ -1.7
HPS3Q969F9 AC114967.1-201ENST00000504890 259 ntBASIC4.45□□□□□ -1.7
HPS3Q969F9 AC010460.1-201ENST00000507087 466 ntBASIC4.45□□□□□ -1.7
HPS3Q969F9 AC026801.2-201ENST00000515352 425 ntBASIC4.45□□□□□ -1.7
HPS3Q969F9 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.45□□□□□ -1.7
HPS3Q969F9 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HPS3Q969F9 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.45□□□□□ -1.7
HPS3Q969F9 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.45□□□□□ -1.7
HPS3Q969F9 OR4T1P-201ENST00000554933 911 ntBASIC4.45□□□□□ -1.7
HPS3Q969F9 AC022968.1-201ENST00000567372 442 ntBASIC4.45□□□□□ -1.7
HPS3Q969F9 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.45□□□□□ -1.7
HPS3Q969F9 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.45□□□□□ -1.7
HPS3Q969F9 SNRPGP15-201ENST00000600149 222 ntBASIC4.45□□□□□ -1.7
HPS3Q969F9 VN1R85P-201ENST00000601587 426 ntBASIC4.45□□□□□ -1.7
HPS3Q969F9 AP001429.1-201ENST00000602568 530 ntBASIC4.45□□□□□ -1.7
HPS3Q969F9 AC008277.2-201ENST00000605196 797 ntBASIC4.45□□□□□ -1.7
HPS3Q969F9 MIR98-201ENST00000606724 119 ntBASIC4.45□□□□□ -1.7
HPS3Q969F9 AC245517.5-201ENST00000611529 162 ntBASIC4.45□□□□□ -1.7
HPS3Q969F9 AC024941.1-201ENST00000612250 334 ntBASIC4.45□□□□□ -1.7
HPS3Q969F9 AL592295.2-201ENST00000612578 206 ntBASIC4.45□□□□□ -1.7
HPS3Q969F9 MIR6130-201ENST00000619419 109 ntBASIC4.45□□□□□ -1.7
HPS3Q969F9 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.45□□□□□ -1.7
HPS3Q969F9 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 174.1 ms