Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 MIR578-201ENST00000384828 96 ntBASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 SNORD78.2-201ENST00000391076 69 ntBASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 U3.35-201ENST00000408405 208 ntBASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 RNU6-607P-201ENST00000411283 108 ntBASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 CYCSP33-201ENST00000414485 327 ntBASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 TMSB10P2-201ENST00000416049 131 ntBASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 AC234781.4-201ENST00000419384 244 ntBASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 AC126120.1-201ENST00000431082 470 ntBASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 RPL12P17-201ENST00000432393 498 ntBASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 AL360271.2-201ENST00000447710 161 ntBASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 AC016027.4-201ENST00000450866 277 ntBASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 AC104164.1-201ENST00000460282 590 ntBASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 RNU6-27P-201ENST00000516146 107 ntBASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 MIR2355-201ENST00000517199 87 ntBASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 LRRC37A5P-203ENST00000580181 585 ntBASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 PRPF19P1-201ENST00000584766 898 ntBASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 MIR15A-201ENST00000607334 83 ntBASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 RN7SL544P-201ENST00000617232 284 ntBASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 RN7SL763P-201ENST00000620922 284 ntBASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 PRO1804-201ENST00000623780 2050 ntBASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SNIP1Q8TAD8 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SNIP1Q8TAD8 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SNIP1Q8TAD8 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SNIP1Q8TAD8 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SNIP1Q8TAD8 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.67□□□□□ -1.5
SNIP1Q8TAD8 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.67□□□□□ -1.5
SNIP1Q8TAD8 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
SNIP1Q8TAD8 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.67□□□□□ -1.5
SNIP1Q8TAD8 TTC41P-205ENST00000551270 3963 ntBASIC5.67□□□□□ -1.5
SNIP1Q8TAD8 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SNIP1Q8TAD8 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SNIP1Q8TAD8 SNORA25.1-201ENST00000362326 128 ntBASIC5.67□□□□□ -1.5
SNIP1Q8TAD8 SNORD8-201ENST00000363915 110 ntBASIC5.67□□□□□ -1.5
SNIP1Q8TAD8 Y_RNA.218-201ENST00000364218 104 ntBASIC5.67□□□□□ -1.5
SNIP1Q8TAD8 RNU6-818P-201ENST00000364837 108 ntBASIC5.67□□□□□ -1.5
SNIP1Q8TAD8 SNORA12.2-201ENST00000391040 156 ntBASIC5.67□□□□□ -1.5
SNIP1Q8TAD8 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC5.67□□□□□ -1.5
SNIP1Q8TAD8 HSPD1P21-201ENST00000436541 245 ntBASIC5.67□□□□□ -1.5
SNIP1Q8TAD8 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.67□□□□□ -1.5
SNIP1Q8TAD8 OR2AO1P-201ENST00000476497 403 ntBASIC5.67□□□□□ -1.5
SNIP1Q8TAD8 RN7SL165P-201ENST00000477476 291 ntBASIC5.67□□□□□ -1.5
SNIP1Q8TAD8 RN7SL30P-201ENST00000488416 306 ntBASIC5.67□□□□□ -1.5
SNIP1Q8TAD8 AC083795.1-201ENST00000491760 320 ntBASIC5.67□□□□□ -1.5
SNIP1Q8TAD8 RNU6-844P-201ENST00000517175 102 ntBASIC5.67□□□□□ -1.5
SNIP1Q8TAD8 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.67□□□□□ -1.5
SNIP1Q8TAD8 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC5.67□□□□□ -1.5
SNIP1Q8TAD8 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SNIP1Q8TAD8 RN7SL652P-201ENST00000577769 300 ntBASIC5.67□□□□□ -1.5
SNIP1Q8TAD8 AC123912.5-201ENST00000605470 343 ntBASIC5.67□□□□□ -1.5
SNIP1Q8TAD8 AC024940.4-201ENST00000605507 246 ntBASIC5.67□□□□□ -1.5
SNIP1Q8TAD8 SNORD113-5-201ENST00000607261 78 ntBASIC5.67□□□□□ -1.5
SNIP1Q8TAD8 AC009318.2-201ENST00000610917 651 ntBASIC5.67□□□□□ -1.5
SNIP1Q8TAD8 TCL6_3.1-201ENST00000619064 137 ntBASIC5.67□□□□□ -1.5
SNIP1Q8TAD8 AC008785.1-201ENST00000624475 456 ntBASIC5.67□□□□□ -1.5
SNIP1Q8TAD8 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.67□□□□□ -1.5
SNIP1Q8TAD8 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SNIP1Q8TAD8 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SNIP1Q8TAD8 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SNIP1Q8TAD8 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SNIP1Q8TAD8 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.67□□□□□ -1.5
SNIP1Q8TAD8 OLMALINC-203ENST00000641087 3779 ntBASIC5.67□□□□□ -1.5
SNIP1Q8TAD8 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
SNIP1Q8TAD8 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.67□□□□□ -1.5
SNIP1Q8TAD8 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SNIP1Q8TAD8 PABPC1P6-201ENST00000445594 1829 ntBASIC5.67□□□□□ -1.5
SNIP1Q8TAD8 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SNIP1Q8TAD8 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC5.67□□□□□ -1.5
SNIP1Q8TAD8 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.66□□□□□ -1.5
SNIP1Q8TAD8 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.66□□□□□ -1.5
SNIP1Q8TAD8 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
SNIP1Q8TAD8 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SNIP1Q8TAD8 DDX10P1-201ENST00000448545 1933 ntBASIC5.66□□□□□ -1.5
SNIP1Q8TAD8 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
SNIP1Q8TAD8 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SNIP1Q8TAD8 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.66□□□□□ -1.5
SNIP1Q8TAD8 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SNIP1Q8TAD8 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.66□□□□□ -1.5
SNIP1Q8TAD8 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms