Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC114967.1-201ENST00000504890 259 ntBASIC4.92□□□□□ -1.62
SMC1BQ8NDV3 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.92□□□□□ -1.62
SMC1BQ8NDV3 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.92□□□□□ -1.62
SMC1BQ8NDV3 AP003385.6-201ENST00000531603 374 ntBASIC4.92□□□□□ -1.62
SMC1BQ8NDV3 OR8L1P-201ENST00000534005 955 ntBASIC4.92□□□□□ -1.62
SMC1BQ8NDV3 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.92□□□□□ -1.62
SMC1BQ8NDV3 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.92□□□□□ -1.62
SMC1BQ8NDV3 AC068135.2-201ENST00000569293 1028 ntBASIC4.92□□□□□ -1.62
SMC1BQ8NDV3 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.92□□□□□ -1.62
SMC1BQ8NDV3 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SMC1BQ8NDV3 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.92□□□□□ -1.62
SMC1BQ8NDV3 AC091925.2-201ENST00000625059 256 ntBASIC4.92□□□□□ -1.62
SMC1BQ8NDV3 AC008013.2-202ENST00000637965 364 ntBASIC4.92□□□□□ -1.62
SMC1BQ8NDV3 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
SMC1BQ8NDV3 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SMC1BQ8NDV3 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
SMC1BQ8NDV3 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
SMC1BQ8NDV3 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SMC1BQ8NDV3 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 U3.26-201ENST00000391236 204 ntBASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 LAP3P1-201ENST00000403648 294 ntBASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 CCNG1P1-201ENST00000406783 885 ntBASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 RN7SKP284-201ENST00000411002 343 ntBASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 AC127526.1-201ENST00000417526 366 ntBASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 MTND1P2-201ENST00000430604 821 ntBASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 AC002486.1-201ENST00000435098 391 ntBASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 AC115115.1-201ENST00000449927 248 ntBASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 AL353691.1-201ENST00000451332 387 ntBASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 AC104308.1-201ENST00000454621 333 ntBASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 ST13P14-201ENST00000474095 734 ntBASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 RN7SKP116-201ENST00000516902 319 ntBASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 FAM92A1P1-201ENST00000528023 890 ntBASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 AL352979.3-201ENST00000553515 247 ntBASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 MIR3922-201ENST00000585192 84 ntBASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 AL365503.1-201ENST00000605247 905 ntBASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 AC055876.5-201ENST00000605667 259 ntBASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 AP002360.4-201ENST00000606980 481 ntBASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 AL355472.4-201ENST00000610233 626 ntBASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 AL590099.1-201ENST00000615276 138 ntBASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 AC140113.4-201ENST00000622087 222 ntBASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 AC040168.1-201ENST00000623594 991 ntBASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 LRRC77P-213ENST00000637727 880 ntBASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 MAPK10-303ENST00000641324 3959 ntBASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.91□□□□□ -1.62
SMC1BQ8NDV3 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
SMC1BQ8NDV3 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SMC1BQ8NDV3 AC116667.1-201ENST00000604855 2072 ntBASIC4.9□□□□□ -1.62
SMC1BQ8NDV3 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
SMC1BQ8NDV3 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.9□□□□□ -1.62
SMC1BQ8NDV3 AL049555.1-201ENST00000562834 1933 ntBASIC4.9□□□□□ -1.62
SMC1BQ8NDV3 MARK2P15-201ENST00000432204 2186 ntBASIC4.9□□□□□ -1.62
SMC1BQ8NDV3 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
SMC1BQ8NDV3 Y_RNA.1-201ENST00000352915 104 ntBASIC4.9□□□□□ -1.63
SMC1BQ8NDV3 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4.9□□□□□ -1.63
SMC1BQ8NDV3 RNU6-1103P-201ENST00000384150 107 ntBASIC4.9□□□□□ -1.63
SMC1BQ8NDV3 Y_RNA.493-201ENST00000384422 102 ntBASIC4.9□□□□□ -1.63
SMC1BQ8NDV3 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.9□□□□□ -1.63
SMC1BQ8NDV3 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.9□□□□□ -1.63
SMC1BQ8NDV3 MTND3P17-201ENST00000416968 344 ntBASIC4.9□□□□□ -1.63
SMC1BQ8NDV3 AL035423.1-201ENST00000420331 213 ntBASIC4.9□□□□□ -1.63
SMC1BQ8NDV3 EIF4EP1-201ENST00000422311 642 ntBASIC4.9□□□□□ -1.63
SMC1BQ8NDV3 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.9□□□□□ -1.63
SMC1BQ8NDV3 AC104850.1-201ENST00000435940 476 ntBASIC4.9□□□□□ -1.63
SMC1BQ8NDV3 MTATP6P23-201ENST00000440153 476 ntBASIC4.9□□□□□ -1.63
SMC1BQ8NDV3 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.9□□□□□ -1.63
SMC1BQ8NDV3 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC4.9□□□□□ -1.63
SMC1BQ8NDV3 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.9□□□□□ -1.63
SMC1BQ8NDV3 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.9□□□□□ -1.63
SMC1BQ8NDV3 RPS29P19-201ENST00000479709 171 ntBASIC4.9□□□□□ -1.63
SMC1BQ8NDV3 RPS3AP14-201ENST00000483907 780 ntBASIC4.9□□□□□ -1.63
SMC1BQ8NDV3 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC4.9□□□□□ -1.63
SMC1BQ8NDV3 RPS4XP18-201ENST00000495480 763 ntBASIC4.9□□□□□ -1.63
SMC1BQ8NDV3 UBE2CP3-201ENST00000502715 450 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms