Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC63Q8NA47 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC63Q8NA47 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC63Q8NA47 ATG12P2-201ENST00000456830 416 ntBASIC3.34□□□□□ -1.87
CCDC63Q8NA47 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC63Q8NA47 MTCO2P6-201ENST00000463134 685 ntBASIC3.34□□□□□ -1.87
CCDC63Q8NA47 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC63Q8NA47 AC006483.1-201ENST00000487308 313 ntBASIC3.34□□□□□ -1.87
CCDC63Q8NA47 FAM172BP-201ENST00000487497 1089 ntBASIC3.34□□□□□ -1.87
CCDC63Q8NA47 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC63Q8NA47 AC093809.1-201ENST00000509155 340 ntBASIC3.34□□□□□ -1.87
CCDC63Q8NA47 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC63Q8NA47 RNA5SP216-201ENST00000516111 123 ntBASIC3.34□□□□□ -1.87
CCDC63Q8NA47 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC63Q8NA47 AC087276.1-201ENST00000529659 480 ntBASIC3.34□□□□□ -1.87
CCDC63Q8NA47 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC63Q8NA47 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.34□□□□□ -1.87
CCDC63Q8NA47 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC63Q8NA47 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC63Q8NA47 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC63Q8NA47 AC092354.2-201ENST00000607786 514 ntBASIC3.34□□□□□ -1.87
CCDC63Q8NA47 AL360219.1-201ENST00000610230 366 ntBASIC3.34□□□□□ -1.87
CCDC63Q8NA47 MIR7851-201ENST00000610611 160 ntBASIC3.34□□□□□ -1.87
CCDC63Q8NA47 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC63Q8NA47 AL031667.3-201ENST00000620124 655 ntBASIC3.34□□□□□ -1.87
CCDC63Q8NA47 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.34□□□□□ -1.87
CCDC63Q8NA47 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC63Q8NA47 AC007671.2-201ENST00000637344 619 ntBASIC3.34□□□□□ -1.87
CCDC63Q8NA47 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC63Q8NA47 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC63Q8NA47 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.34□□□□□ -1.87
CCDC63Q8NA47 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC63Q8NA47 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
CCDC63Q8NA47 AC110774.1-201ENST00000623567 2018 ntBASIC3.34□□□□□ -1.88
CCDC63Q8NA47 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CCDC63Q8NA47 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CCDC63Q8NA47 RNU6-744P-201ENST00000365557 107 ntBASIC3.33□□□□□ -1.88
CCDC63Q8NA47 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC63Q8NA47 RNU6-1316P-201ENST00000384242 108 ntBASIC3.33□□□□□ -1.88
CCDC63Q8NA47 SAR1AP2-201ENST00000392696 594 ntBASIC3.33□□□□□ -1.88
CCDC63Q8NA47 AL354719.1-201ENST00000406535 843 ntBASIC3.33□□□□□ -1.88
CCDC63Q8NA47 RNU4-65P-201ENST00000410473 140 ntBASIC3.33□□□□□ -1.88
CCDC63Q8NA47 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC63Q8NA47 BX119904.4-201ENST00000424402 301 ntBASIC3.33□□□□□ -1.88
CCDC63Q8NA47 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC63Q8NA47 AL353705.1-201ENST00000433468 480 ntBASIC3.33□□□□□ -1.88
CCDC63Q8NA47 GOT2P5-201ENST00000433995 546 ntBASIC3.33□□□□□ -1.88
CCDC63Q8NA47 RSU1P2-202ENST00000437884 485 ntBASIC3.33□□□□□ -1.88
CCDC63Q8NA47 LSM1P1-201ENST00000438629 273 ntBASIC3.33□□□□□ -1.88
CCDC63Q8NA47 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC63Q8NA47 AL359073.1-201ENST00000448036 403 ntBASIC3.33□□□□□ -1.88
CCDC63Q8NA47 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC63Q8NA47 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC63Q8NA47 RPL30P9-201ENST00000465586 330 ntBASIC3.33□□□□□ -1.88
CCDC63Q8NA47 AC068587.2-201ENST00000478386 781 ntBASIC3.33□□□□□ -1.88
CCDC63Q8NA47 LINC00888-204ENST00000487386 421 ntBASIC3.33□□□□□ -1.88
CCDC63Q8NA47 AC112198.1-201ENST00000505369 1220 ntBASIC3.33□□□□□ -1.88
CCDC63Q8NA47 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC63Q8NA47 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC63Q8NA47 AC105914.1-201ENST00000511798 226 ntBASIC3.33□□□□□ -1.88
CCDC63Q8NA47 RN7SKP18-201ENST00000516005 275 ntBASIC3.33□□□□□ -1.88
CCDC63Q8NA47 RNU1-61P-201ENST00000516107 151 ntBASIC3.33□□□□□ -1.88
CCDC63Q8NA47 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC63Q8NA47 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC63Q8NA47 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
CCDC63Q8NA47 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC63Q8NA47 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC63Q8NA47 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC63Q8NA47 AC145350.1-201ENST00000567426 208 ntBASIC3.33□□□□□ -1.88
CCDC63Q8NA47 OR4K8P-201ENST00000578842 1048 ntBASIC3.33□□□□□ -1.88
CCDC63Q8NA47 AC007448.1-201ENST00000582714 234 ntBASIC3.33□□□□□ -1.88
CCDC63Q8NA47 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC63Q8NA47 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC63Q8NA47 AC019176.2-201ENST00000611579 315 ntBASIC3.33□□□□□ -1.88
CCDC63Q8NA47 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.33□□□□□ -1.88
CCDC63Q8NA47 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
CCDC63Q8NA47 AC097520.1-201ENST00000624435 385 ntBASIC3.33□□□□□ -1.88
CCDC63Q8NA47 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC63Q8NA47 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC63Q8NA47 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.33□□□□□ -1.88
CCDC63Q8NA47 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
CCDC63Q8NA47 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC63Q8NA47 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC63Q8NA47 AL161781.1-201ENST00000354277 403 ntBASIC3.32□□□□□ -1.88
CCDC63Q8NA47 Y_RNA.302-201ENST00000364997 102 ntBASIC3.32□□□□□ -1.88
CCDC63Q8NA47 U8.11-201ENST00000384699 133 ntBASIC3.32□□□□□ -1.88
CCDC63Q8NA47 U8.12-201ENST00000384701 133 ntBASIC3.32□□□□□ -1.88
CCDC63Q8NA47 SNORA46-201ENST00000384762 135 ntBASIC3.32□□□□□ -1.88
CCDC63Q8NA47 RN7SKP266-201ENST00000410232 287 ntBASIC3.32□□□□□ -1.88
CCDC63Q8NA47 AC016769.2-201ENST00000414815 475 ntBASIC3.32□□□□□ -1.88
CCDC63Q8NA47 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC63Q8NA47 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC63Q8NA47 SSXP9-201ENST00000417503 292 ntBASIC3.32□□□□□ -1.88
CCDC63Q8NA47 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.32□□□□□ -1.88
CCDC63Q8NA47 AL445669.1-201ENST00000426743 755 ntBASIC3.32□□□□□ -1.88
CCDC63Q8NA47 AC093151.1-201ENST00000427711 313 ntBASIC3.32□□□□□ -1.88
CCDC63Q8NA47 OR2AS1P-201ENST00000427827 319 ntBASIC3.32□□□□□ -1.88
CCDC63Q8NA47 AC091862.1-201ENST00000438016 1100 ntBASIC3.32□□□□□ -1.88
CCDC63Q8NA47 OR6K5P-201ENST00000447050 945 ntBASIC3.32□□□□□ -1.88
CCDC63Q8NA47 AC115115.1-201ENST00000449927 248 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms