Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.38□□□□□ -1.87
RTL3Q8N8U3 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.38□□□□□ -1.87
RTL3Q8N8U3 UBE2NP1-201ENST00000545592 458 ntBASIC3.38□□□□□ -1.87
RTL3Q8N8U3 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.38□□□□□ -1.87
RTL3Q8N8U3 AC145350.1-201ENST00000567426 208 ntBASIC3.38□□□□□ -1.87
RTL3Q8N8U3 AC090615.1-201ENST00000577519 154 ntBASIC3.38□□□□□ -1.87
RTL3Q8N8U3 OR4K8P-201ENST00000578842 1048 ntBASIC3.38□□□□□ -1.87
RTL3Q8N8U3 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.38□□□□□ -1.87
RTL3Q8N8U3 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.38□□□□□ -1.87
RTL3Q8N8U3 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.38□□□□□ -1.87
RTL3Q8N8U3 AC069200.1-201ENST00000609511 323 ntBASIC3.38□□□□□ -1.87
RTL3Q8N8U3 AL450489.1-201ENST00000612071 468 ntBASIC3.38□□□□□ -1.87
RTL3Q8N8U3 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.38□□□□□ -1.87
RTL3Q8N8U3 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
RTL3Q8N8U3 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RTL3Q8N8U3 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.38□□□□□ -1.87
RTL3Q8N8U3 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
RTL3Q8N8U3 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RTL3Q8N8U3 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.38□□□□□ -1.87
RTL3Q8N8U3 AC007496.3-201ENST00000624987 3443 ntBASIC3.38□□□□□ -1.87
RTL3Q8N8U3 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RTL3Q8N8U3 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
RTL3Q8N8U3 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.37□□□□□ -1.87
RTL3Q8N8U3 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
RTL3Q8N8U3 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RTL3Q8N8U3 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RTL3Q8N8U3 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RTL3Q8N8U3 AC005539.1-201ENST00000443768 1479 ntBASIC3.37□□□□□ -1.87
RTL3Q8N8U3 FRG1BP-201ENST00000278882 761 ntBASIC3.37□□□□□ -1.87
RTL3Q8N8U3 RNU6-1214P-201ENST00000363650 109 ntBASIC3.37□□□□□ -1.87
RTL3Q8N8U3 RNA5SP267-201ENST00000364893 126 ntBASIC3.37□□□□□ -1.87
RTL3Q8N8U3 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RTL3Q8N8U3 SNORA1.3-201ENST00000384676 136 ntBASIC3.37□□□□□ -1.87
RTL3Q8N8U3 HMGB1P17-201ENST00000403495 628 ntBASIC3.37□□□□□ -1.87
RTL3Q8N8U3 AC068533.2-201ENST00000411872 306 ntBASIC3.37□□□□□ -1.87
RTL3Q8N8U3 CCDC58P2-201ENST00000417131 366 ntBASIC3.37□□□□□ -1.87
RTL3Q8N8U3 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.37□□□□□ -1.87
RTL3Q8N8U3 USP9YP36-201ENST00000424581 829 ntBASIC3.37□□□□□ -1.87
RTL3Q8N8U3 AC005300.1-201ENST00000428401 373 ntBASIC3.37□□□□□ -1.87
RTL3Q8N8U3 AC005326.1-201ENST00000429197 123 ntBASIC3.37□□□□□ -1.87
RTL3Q8N8U3 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.37□□□□□ -1.87
RTL3Q8N8U3 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.37□□□□□ -1.87
RTL3Q8N8U3 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.37□□□□□ -1.87
RTL3Q8N8U3 BX679664.1-201ENST00000434429 253 ntBASIC3.37□□□□□ -1.87
RTL3Q8N8U3 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.37□□□□□ -1.87
RTL3Q8N8U3 AC234775.1-201ENST00000454247 670 ntBASIC3.37□□□□□ -1.87
RTL3Q8N8U3 RPL18AP17-201ENST00000455326 198 ntBASIC3.37□□□□□ -1.87
RTL3Q8N8U3 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.37□□□□□ -1.87
RTL3Q8N8U3 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RTL3Q8N8U3 HSPD1P15-201ENST00000505573 1122 ntBASIC3.37□□□□□ -1.87
RTL3Q8N8U3 MTND4LP22-201ENST00000508209 276 ntBASIC3.37□□□□□ -1.87
RTL3Q8N8U3 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.37□□□□□ -1.87
RTL3Q8N8U3 SNORA31.1-201ENST00000515993 133 ntBASIC3.37□□□□□ -1.87
RTL3Q8N8U3 SNORA31.5-201ENST00000516190 133 ntBASIC3.37□□□□□ -1.87
RTL3Q8N8U3 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.37□□□□□ -1.87
RTL3Q8N8U3 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.37□□□□□ -1.87
RTL3Q8N8U3 IGHV3-76-201ENST00000522465 295 ntBASIC3.37□□□□□ -1.87
RTL3Q8N8U3 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.37□□□□□ -1.87
RTL3Q8N8U3 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.37□□□□□ -1.87
RTL3Q8N8U3 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.37□□□□□ -1.87
RTL3Q8N8U3 NBEAP1-201ENST00000554452 979 ntBASIC3.37□□□□□ -1.87
RTL3Q8N8U3 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.37□□□□□ -1.87
RTL3Q8N8U3 BNIP3P26-201ENST00000600827 554 ntBASIC3.37□□□□□ -1.87
RTL3Q8N8U3 CKS1BP3-201ENST00000600888 237 ntBASIC3.37□□□□□ -1.87
RTL3Q8N8U3 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.37□□□□□ -1.87
RTL3Q8N8U3 AL157817.1-201ENST00000614264 790 ntBASIC3.37□□□□□ -1.87
RTL3Q8N8U3 AL596245.1-201ENST00000618994 362 ntBASIC3.37□□□□□ -1.87
RTL3Q8N8U3 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.37□□□□□ -1.87
RTL3Q8N8U3 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RTL3Q8N8U3 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RTL3Q8N8U3 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RTL3Q8N8U3 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RTL3Q8N8U3 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RTL3Q8N8U3 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.37□□□□□ -1.87
RTL3Q8N8U3 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
RTL3Q8N8U3 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.36□□□□□ -1.87
RTL3Q8N8U3 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.36□□□□□ -1.87
RTL3Q8N8U3 AL079343.1-201ENST00000572358 1771 ntBASIC3.36□□□□□ -1.87
RTL3Q8N8U3 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RTL3Q8N8U3 AC010733.2-201ENST00000589496 5702 ntBASIC3.36□□□□□ -1.87
RTL3Q8N8U3 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
RTL3Q8N8U3 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RTL3Q8N8U3 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.36□□□□□ -1.87
RTL3Q8N8U3 RNVU1-14-201ENST00000384770 164 ntBASIC3.36□□□□□ -1.87
RTL3Q8N8U3 MIR34B-201ENST00000385076 84 ntBASIC3.36□□□□□ -1.87
RTL3Q8N8U3 RSL24D1P4-201ENST00000400938 484 ntBASIC3.36□□□□□ -1.87
RTL3Q8N8U3 RNA5SP31-201ENST00000411144 127 ntBASIC3.36□□□□□ -1.87
RTL3Q8N8U3 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.36□□□□□ -1.87
RTL3Q8N8U3 RPS6P15-201ENST00000431996 751 ntBASIC3.36□□□□□ -1.87
RTL3Q8N8U3 CST9LP2-201ENST00000437612 320 ntBASIC3.36□□□□□ -1.87
RTL3Q8N8U3 FGF7P5-201ENST00000441829 291 ntBASIC3.36□□□□□ -1.87
RTL3Q8N8U3 RPL23AP76-201ENST00000441860 458 ntBASIC3.36□□□□□ -1.87
RTL3Q8N8U3 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.36□□□□□ -1.87
RTL3Q8N8U3 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.36□□□□□ -1.87
RTL3Q8N8U3 AL590664.1-201ENST00000448065 339 ntBASIC3.36□□□□□ -1.87
RTL3Q8N8U3 ARPC3P5-201ENST00000448802 534 ntBASIC3.36□□□□□ -1.87
RTL3Q8N8U3 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.36□□□□□ -1.87
RTL3Q8N8U3 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.36□□□□□ -1.87
RTL3Q8N8U3 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RTL3Q8N8U3 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms