Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.67□□□□□ -1.82
PCDH20Q8N6Y1 AC006362.1-201ENST00000567392 174 ntBASIC3.67□□□□□ -1.82
PCDH20Q8N6Y1 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.67□□□□□ -1.82
PCDH20Q8N6Y1 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.67□□□□□ -1.82
PCDH20Q8N6Y1 MIR548AB-201ENST00000584917 84 ntBASIC3.67□□□□□ -1.82
PCDH20Q8N6Y1 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.67□□□□□ -1.82
PCDH20Q8N6Y1 AC022146.1-201ENST00000595307 847 ntBASIC3.67□□□□□ -1.82
PCDH20Q8N6Y1 RNA5SP108-201ENST00000605921 117 ntBASIC3.67□□□□□ -1.82
PCDH20Q8N6Y1 HULC.1-201ENST00000612720 240 ntBASIC3.67□□□□□ -1.82
PCDH20Q8N6Y1 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.67□□□□□ -1.82
PCDH20Q8N6Y1 U7.8-201ENST00000619968 63 ntBASIC3.67□□□□□ -1.82
PCDH20Q8N6Y1 CR381572.1-201ENST00000625098 102 ntBASIC3.67□□□□□ -1.82
PCDH20Q8N6Y1 AC138649.5-201ENST00000637456 137 ntBASIC3.67□□□□□ -1.82
PCDH20Q8N6Y1 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
PCDH20Q8N6Y1 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
PCDH20Q8N6Y1 AC092447.10-201ENST00000620607 1652 ntBASIC3.67□□□□□ -1.82
PCDH20Q8N6Y1 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
PCDH20Q8N6Y1 AC007823.1-201ENST00000569932 1566 ntBASIC3.67□□□□□ -1.82
PCDH20Q8N6Y1 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.67□□□□□ -1.82
PCDH20Q8N6Y1 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
PCDH20Q8N6Y1 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PCDH20Q8N6Y1 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PCDH20Q8N6Y1 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PCDH20Q8N6Y1 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.66□□□□□ -1.82
PCDH20Q8N6Y1 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PCDH20Q8N6Y1 MTND5P3-201ENST00000438536 1800 ntBASIC3.66□□□□□ -1.82
PCDH20Q8N6Y1 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.66□□□□□ -1.82
PCDH20Q8N6Y1 SNORD116-4-201ENST00000384733 96 ntBASIC3.66□□□□□ -1.82
PCDH20Q8N6Y1 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDH20Q8N6Y1 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.66□□□□□ -1.82
PCDH20Q8N6Y1 MTCO2P34-201ENST00000421994 607 ntBASIC3.66□□□□□ -1.82
PCDH20Q8N6Y1 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PCDH20Q8N6Y1 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.66□□□□□ -1.82
PCDH20Q8N6Y1 MTND1P28-201ENST00000435623 950 ntBASIC3.66□□□□□ -1.82
PCDH20Q8N6Y1 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDH20Q8N6Y1 ST13P20-201ENST00000447996 1065 ntBASIC3.66□□□□□ -1.82
PCDH20Q8N6Y1 RPS20P32-201ENST00000456044 356 ntBASIC3.66□□□□□ -1.82
PCDH20Q8N6Y1 snoU13.8-201ENST00000458890 104 ntBASIC3.66□□□□□ -1.82
PCDH20Q8N6Y1 snoU13.3-201ENST00000459441 104 ntBASIC3.66□□□□□ -1.82
PCDH20Q8N6Y1 AC034222.1-201ENST00000494052 532 ntBASIC3.66□□□□□ -1.82
PCDH20Q8N6Y1 COX7A2P2-201ENST00000505291 250 ntBASIC3.66□□□□□ -1.82
PCDH20Q8N6Y1 CBX3P3-201ENST00000508108 532 ntBASIC3.66□□□□□ -1.82
PCDH20Q8N6Y1 OR4R3P-201ENST00000525084 838 ntBASIC3.66□□□□□ -1.82
PCDH20Q8N6Y1 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.66□□□□□ -1.82
PCDH20Q8N6Y1 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.66□□□□□ -1.82
PCDH20Q8N6Y1 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDH20Q8N6Y1 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDH20Q8N6Y1 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.66□□□□□ -1.82
PCDH20Q8N6Y1 AC006116.10-201ENST00000591836 581 ntBASIC3.66□□□□□ -1.82
PCDH20Q8N6Y1 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PCDH20Q8N6Y1 AC087752.4-201ENST00000605911 462 ntBASIC3.66□□□□□ -1.82
PCDH20Q8N6Y1 U3.45-201ENST00000607547 219 ntBASIC3.66□□□□□ -1.82
PCDH20Q8N6Y1 MIR7851-201ENST00000610611 160 ntBASIC3.66□□□□□ -1.82
PCDH20Q8N6Y1 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
PCDH20Q8N6Y1 AC027807.2-201ENST00000616099 408 ntBASIC3.66□□□□□ -1.82
PCDH20Q8N6Y1 AC092656.1-203ENST00000624134 423 ntBASIC3.66□□□□□ -1.82
PCDH20Q8N6Y1 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.66□□□□□ -1.82
PCDH20Q8N6Y1 AL049780.3-201ENST00000624612 1583 ntBASIC3.66□□□□□ -1.82
PCDH20Q8N6Y1 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.66□□□□□ -1.82
PCDH20Q8N6Y1 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
PCDH20Q8N6Y1 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.66□□□□□ -1.82
PCDH20Q8N6Y1 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PCDH20Q8N6Y1 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.66□□□□□ -1.82
PCDH20Q8N6Y1 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
PCDH20Q8N6Y1 AC090337.1-201ENST00000579651 2074 ntBASIC3.66□□□□□ -1.82
PCDH20Q8N6Y1 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PCDH20Q8N6Y1 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.65□□□□□ -1.82
PCDH20Q8N6Y1 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
PCDH20Q8N6Y1 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 RNA5SP119-201ENST00000362715 117 ntBASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 RNA5SP258-201ENST00000362750 119 ntBASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 RNU5E-5P-201ENST00000365379 116 ntBASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 RNA5SP167-201ENST00000365461 116 ntBASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 RNA5SP171-201ENST00000391071 115 ntBASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 AL356421.1-201ENST00000403255 413 ntBASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 AC006366.1-201ENST00000422002 759 ntBASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 AL513174.1-201ENST00000423182 629 ntBASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 HMGN2P31-201ENST00000432430 273 ntBASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 MRPS18BP2-201ENST00000434310 759 ntBASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 RPL7P36-201ENST00000444633 681 ntBASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 USP9YP29-201ENST00000445112 563 ntBASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 RPS29P31-201ENST00000446147 164 ntBASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 AL592447.1-201ENST00000447592 540 ntBASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 snoU109.4-201ENST00000458953 143 ntBASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 AL049830.2-201ENST00000480072 201 ntBASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 AC110768.1-201ENST00000509222 400 ntBASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 FABP5P5-201ENST00000515537 406 ntBASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 RNU6-579P-201ENST00000516879 102 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms