Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 AC097714.1-201ENST00000511272 1647 ntBASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 AP001486.2-201ENST00000561652 5113 ntBASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 Y_RNA.9-201ENST00000362354 101 ntBASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 Y_RNA.256-201ENST00000364594 104 ntBASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 Y_RNA.372-201ENST00000365599 102 ntBASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 CALM2P3-201ENST00000400429 449 ntBASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 AL356421.1-201ENST00000403255 413 ntBASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 RPL7P25-201ENST00000404151 721 ntBASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 AC016397.1-201ENST00000412463 242 ntBASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 PIGFP2-201ENST00000421400 651 ntBASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 PSMA6P3-201ENST00000428242 164 ntBASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 FCF1P1-201ENST00000432690 571 ntBASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 NEK4P1-201ENST00000433383 879 ntBASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 RANP8-201ENST00000444720 713 ntBASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 WASF1P1-201ENST00000447560 1131 ntBASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 RPS20P32-201ENST00000456044 356 ntBASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 AL136097.1-201ENST00000456945 913 ntBASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 AC087312.1-201ENST00000471411 480 ntBASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 RPS3AP14-201ENST00000483907 780 ntBASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 AC093267.1-201ENST00000489176 961 ntBASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 FAM92A1P2-202ENST00000504766 877 ntBASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 AC026784.1-201ENST00000507986 352 ntBASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 Y_RNA.672-201ENST00000516289 104 ntBASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 SNORA31.9-201ENST00000516429 84 ntBASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 FAM92A1P1-201ENST00000528023 890 ntBASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 AC024224.1-201ENST00000538284 609 ntBASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 AC091516.1-201ENST00000549191 703 ntBASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 AC025884.1-201ENST00000556034 378 ntBASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 AL353997.4-201ENST00000586196 166 ntBASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 NRBF2P1-201ENST00000587407 859 ntBASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 DUXAP4-201ENST00000603046 613 ntBASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 AC091167.4-201ENST00000605079 184 ntBASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 OR10AB1P-201ENST00000609613 938 ntBASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 AC009268.2-201ENST00000621925 457 ntBASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 AC092628.2-201ENST00000622492 339 ntBASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 MIR4496-201ENST00000635896 61 ntBASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 OR52H1-202ENST00000641796 1061 ntBASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.63□□□□□ -1.83
CLIP4Q8N3C7 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
CLIP4Q8N3C7 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.62□□□□□ -1.83
CLIP4Q8N3C7 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CLIP4Q8N3C7 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
CLIP4Q8N3C7 AC092125.1-201ENST00000562568 1995 ntBASIC3.62□□□□□ -1.83
CLIP4Q8N3C7 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CLIP4Q8N3C7 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CLIP4Q8N3C7 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CLIP4Q8N3C7 RIOK3P1-201ENST00000418778 1528 ntBASIC3.62□□□□□ -1.83
CLIP4Q8N3C7 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CLIP4Q8N3C7 RNU5E-4P-201ENST00000364931 120 ntBASIC3.62□□□□□ -1.83
CLIP4Q8N3C7 SNORD82-201ENST00000365530 70 ntBASIC3.62□□□□□ -1.83
CLIP4Q8N3C7 Y_RNA.450-201ENST00000384198 113 ntBASIC3.62□□□□□ -1.83
CLIP4Q8N3C7 RNU6-878P-201ENST00000384578 110 ntBASIC3.62□□□□□ -1.83
CLIP4Q8N3C7 MIR153-1-201ENST00000384914 90 ntBASIC3.62□□□□□ -1.83
CLIP4Q8N3C7 CIR1P3-201ENST00000405137 479 ntBASIC3.62□□□□□ -1.83
CLIP4Q8N3C7 CCNG1P1-201ENST00000406783 885 ntBASIC3.62□□□□□ -1.83
CLIP4Q8N3C7 RNU4-55P-201ENST00000410731 137 ntBASIC3.62□□□□□ -1.83
CLIP4Q8N3C7 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.62□□□□□ -1.83
CLIP4Q8N3C7 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.62□□□□□ -1.83
CLIP4Q8N3C7 AC069157.1-201ENST00000421749 137 ntBASIC3.62□□□□□ -1.83
CLIP4Q8N3C7 DPPA2P1-201ENST00000428060 556 ntBASIC3.62□□□□□ -1.83
CLIP4Q8N3C7 PSMA2P3-201ENST00000429685 675 ntBASIC3.62□□□□□ -1.83
CLIP4Q8N3C7 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.62□□□□□ -1.83
CLIP4Q8N3C7 AC016712.1-201ENST00000431088 378 ntBASIC3.62□□□□□ -1.83
CLIP4Q8N3C7 MTCYBP45-201ENST00000435243 565 ntBASIC3.62□□□□□ -1.83
CLIP4Q8N3C7 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.62□□□□□ -1.83
CLIP4Q8N3C7 SDCBPP1-201ENST00000440192 890 ntBASIC3.62□□□□□ -1.83
CLIP4Q8N3C7 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.62□□□□□ -1.83
CLIP4Q8N3C7 TXNP1-201ENST00000441872 371 ntBASIC3.62□□□□□ -1.83
CLIP4Q8N3C7 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.62□□□□□ -1.83
CLIP4Q8N3C7 H2AFZP6-201ENST00000444403 394 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms