Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
CCDC71Q8IV32 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.13□□□□□ -1.91
CCDC71Q8IV32 AC010928.3-201ENST00000587712 541 ntBASIC3.13□□□□□ -1.91
CCDC71Q8IV32 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC71Q8IV32 NIFKP6-201ENST00000598115 845 ntBASIC3.13□□□□□ -1.91
CCDC71Q8IV32 AL596327.1-201ENST00000603629 213 ntBASIC3.13□□□□□ -1.91
CCDC71Q8IV32 AC090425.2-201ENST00000608818 501 ntBASIC3.13□□□□□ -1.91
CCDC71Q8IV32 AL357080.1-201ENST00000617394 239 ntBASIC3.13□□□□□ -1.91
CCDC71Q8IV32 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC71Q8IV32 AP003355.3-201ENST00000623465 114 ntBASIC3.13□□□□□ -1.91
CCDC71Q8IV32 AC079416.3-201ENST00000624479 549 ntBASIC3.13□□□□□ -1.91
CCDC71Q8IV32 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC71Q8IV32 ZNF833P-201ENST00000424938 1494 ntBASIC3.13□□□□□ -1.91
CCDC71Q8IV32 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC71Q8IV32 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CCDC71Q8IV32 MFSD8-233ENST00000641482 4860 ntBASIC3.12□□□□□ -1.91
CCDC71Q8IV32 RNA5SP258-201ENST00000362750 119 ntBASIC3.12□□□□□ -1.91
CCDC71Q8IV32 RNA5SP189-201ENST00000364920 115 ntBASIC3.12□□□□□ -1.91
CCDC71Q8IV32 RNU5A-2P-201ENST00000384337 116 ntBASIC3.12□□□□□ -1.91
CCDC71Q8IV32 RNU6-952P-201ENST00000391164 108 ntBASIC3.12□□□□□ -1.91
CCDC71Q8IV32 Z99755.1-201ENST00000414048 380 ntBASIC3.12□□□□□ -1.91
CCDC71Q8IV32 HMGB3P23-201ENST00000414981 585 ntBASIC3.12□□□□□ -1.91
CCDC71Q8IV32 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC71Q8IV32 EI24P1-201ENST00000416584 867 ntBASIC3.12□□□□□ -1.91
CCDC71Q8IV32 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC71Q8IV32 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC71Q8IV32 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.12□□□□□ -1.91
CCDC71Q8IV32 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC71Q8IV32 AC019178.2-201ENST00000423595 505 ntBASIC3.12□□□□□ -1.91
CCDC71Q8IV32 AL035407.1-201ENST00000429211 571 ntBASIC3.12□□□□□ -1.91
CCDC71Q8IV32 ZYG11AP1-201ENST00000430329 837 ntBASIC3.12□□□□□ -1.91
CCDC71Q8IV32 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC71Q8IV32 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC71Q8IV32 MUPP-201ENST00000438111 566 ntBASIC3.12□□□□□ -1.91
CCDC71Q8IV32 TRIM60P18-201ENST00000441518 828 ntBASIC3.12□□□□□ -1.91
CCDC71Q8IV32 MTCYBP3-201ENST00000445588 1137 ntBASIC3.12□□□□□ -1.91
CCDC71Q8IV32 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC71Q8IV32 MTND1P31-201ENST00000449206 961 ntBASIC3.12□□□□□ -1.91
CCDC71Q8IV32 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC71Q8IV32 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC71Q8IV32 BTF3P5-201ENST00000457252 467 ntBASIC3.12□□□□□ -1.91
CCDC71Q8IV32 RPL7P5-201ENST00000471472 736 ntBASIC3.12□□□□□ -1.91
CCDC71Q8IV32 AC023598.1-201ENST00000472521 361 ntBASIC3.12□□□□□ -1.91
CCDC71Q8IV32 AC068587.2-201ENST00000478386 781 ntBASIC3.12□□□□□ -1.91
CCDC71Q8IV32 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC71Q8IV32 RNU6-27P-201ENST00000516146 107 ntBASIC3.12□□□□□ -1.91
CCDC71Q8IV32 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
CCDC71Q8IV32 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.12□□□□□ -1.91
CCDC71Q8IV32 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.12□□□□□ -1.91
CCDC71Q8IV32 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC71Q8IV32 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC71Q8IV32 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC71Q8IV32 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
CCDC71Q8IV32 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.12□□□□□ -1.91
CCDC71Q8IV32 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC71Q8IV32 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC71Q8IV32 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC71Q8IV32 OR4H12P-201ENST00000556269 907 ntBASIC3.12□□□□□ -1.91
CCDC71Q8IV32 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC71Q8IV32 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC71Q8IV32 AC090888.2-201ENST00000559765 1144 ntBASIC3.12□□□□□ -1.91
CCDC71Q8IV32 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC71Q8IV32 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC71Q8IV32 AC079228.1-201ENST00000624774 1049 ntBASIC3.12□□□□□ -1.91
CCDC71Q8IV32 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC71Q8IV32 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC71Q8IV32 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC71Q8IV32 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CCDC71Q8IV32 AC244517.1-201ENST00000606030 2086 ntBASIC3.12□□□□□ -1.91
CCDC71Q8IV32 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.11□□□□□ -1.91
CCDC71Q8IV32 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CCDC71Q8IV32 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC71Q8IV32 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC71Q8IV32 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC71Q8IV32 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC71Q8IV32 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC71Q8IV32 RNA5SP383-201ENST00000362934 120 ntBASIC3.11□□□□□ -1.91
CCDC71Q8IV32 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CCDC71Q8IV32 RNU6-1200P-201ENST00000384162 107 ntBASIC3.11□□□□□ -1.91
CCDC71Q8IV32 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CCDC71Q8IV32 AL031679.1-201ENST00000400616 525 ntBASIC3.11□□□□□ -1.91
CCDC71Q8IV32 AL049545.1-201ENST00000401856 572 ntBASIC3.11□□□□□ -1.91
CCDC71Q8IV32 RAP1BP1-201ENST00000412709 553 ntBASIC3.11□□□□□ -1.91
CCDC71Q8IV32 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC71Q8IV32 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC71Q8IV32 MTATP6P27-201ENST00000416987 621 ntBASIC3.11□□□□□ -1.91
CCDC71Q8IV32 AC098592.1-201ENST00000419352 333 ntBASIC3.11□□□□□ -1.91
CCDC71Q8IV32 RPL7P46-201ENST00000425129 740 ntBASIC3.11□□□□□ -1.91
CCDC71Q8IV32 AC007742.1-201ENST00000425789 329 ntBASIC3.11□□□□□ -1.91
CCDC71Q8IV32 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC71Q8IV32 ELOCP26-201ENST00000436067 329 ntBASIC3.11□□□□□ -1.91
CCDC71Q8IV32 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC71Q8IV32 AC097262.1-201ENST00000452559 548 ntBASIC3.11□□□□□ -1.91
CCDC71Q8IV32 AC104308.1-201ENST00000454621 333 ntBASIC3.11□□□□□ -1.91
CCDC71Q8IV32 ARPC3P2-201ENST00000457786 533 ntBASIC3.11□□□□□ -1.91
CCDC71Q8IV32 AC091179.1-201ENST00000461606 579 ntBASIC3.11□□□□□ -1.91
CCDC71Q8IV32 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC71Q8IV32 RPL31P50-201ENST00000471002 296 ntBASIC3.11□□□□□ -1.91
CCDC71Q8IV32 MTND4LP22-201ENST00000508209 276 ntBASIC3.11□□□□□ -1.91
CCDC71Q8IV32 RNA5SP216-201ENST00000516111 123 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms