Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 RAC1P3-201ENST00000416129 580 ntBASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 MTND3P17-201ENST00000416968 344 ntBASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 ISCA1P6-201ENST00000427740 390 ntBASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 ARPC3P5-201ENST00000448802 534 ntBASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 AC103987.1-201ENST00000473394 348 ntBASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 HMGN1P12-201ENST00000499125 195 ntBASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 OR5H5P-201ENST00000503164 928 ntBASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 AC034159.1-201ENST00000513885 583 ntBASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 SCARNA14-201ENST00000516903 136 ntBASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 COX6CP8-201ENST00000522620 226 ntBASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 AP003181.2-201ENST00000528941 181 ntBASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 PDCD5P1-201ENST00000543528 309 ntBASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 CKS1BP3-201ENST00000600888 237 ntBASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 AC007363.1-201ENST00000604736 620 ntBASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 AL137849.1-201ENST00000604767 169 ntBASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 AC011816.2-201ENST00000607089 556 ntBASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 AL121757.2-201ENST00000611223 313 ntBASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 AL359697.1-201ENST00000624879 587 ntBASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 U6.101-201ENST00000637707 76 ntBASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 FAM91A3P-201ENST00000456826 2544 ntBASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ZNF549Q6P9A3 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 RPS4XP5-202ENST00000449995 1334 ntBASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 GNG5P1-201ENST00000255500 204 ntBASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 U1.1-201ENST00000384101 164 ntBASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 Y_RNA.509-201ENST00000384506 99 ntBASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 SOD2P1-201ENST00000396543 562 ntBASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 ARF4P3-201ENST00000397387 509 ntBASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 RPL7P25-201ENST00000404151 721 ntBASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 SPA17P1-201ENST00000416656 452 ntBASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 RPL37P1-201ENST00000432310 284 ntBASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 SKP1P1-201ENST00000438081 489 ntBASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 RPL23AP16-201ENST00000441715 421 ntBASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 RPL17P49-201ENST00000443728 411 ntBASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 RPL21P89-201ENST00000444021 467 ntBASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 AP000542.1-201ENST00000448473 371 ntBASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 AC132479.1-201ENST00000449160 144 ntBASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 AC026410.2-201ENST00000460281 156 ntBASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 RN7SL93P-201ENST00000463035 293 ntBASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 AC006511.1-201ENST00000470614 315 ntBASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 AC024589.1-201ENST00000512207 263 ntBASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 MIR2114-201ENST00000516645 80 ntBASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 SOD1P3-201ENST00000518682 454 ntBASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 SUMO2P20-201ENST00000520803 283 ntBASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 AC090281.1-201ENST00000523019 276 ntBASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 MIR3682-201ENST00000581338 84 ntBASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 NRBF2P1-201ENST00000587407 859 ntBASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 UBE2V2P2-201ENST00000587677 504 ntBASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 AC009268.2-201ENST00000621925 457 ntBASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 AL732618.1-201ENST00000623251 301 ntBASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 CR392039.4-201ENST00000624968 501 ntBASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms