Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 AC117503.1-201ENST00000472241 394 ntBASIC6.11□□□□□ -1.43
RNF20Q5VTR2 AC090686.1-201ENST00000481577 749 ntBASIC6.11□□□□□ -1.43
RNF20Q5VTR2 RPS4XP1-201ENST00000482189 787 ntBASIC6.11□□□□□ -1.43
RNF20Q5VTR2 RN7SL441P-201ENST00000492388 296 ntBASIC6.11□□□□□ -1.43
RNF20Q5VTR2 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC6.11□□□□□ -1.43
RNF20Q5VTR2 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC6.11□□□□□ -1.43
RNF20Q5VTR2 AP001922.4-201ENST00000526967 290 ntBASIC6.11□□□□□ -1.43
RNF20Q5VTR2 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RNF20Q5VTR2 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC6.11□□□□□ -1.43
RNF20Q5VTR2 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC6.11□□□□□ -1.43
RNF20Q5VTR2 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC6.11□□□□□ -1.43
RNF20Q5VTR2 NDUFB4P11-201ENST00000560510 395 ntBASIC6.11□□□□□ -1.43
RNF20Q5VTR2 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC6.11□□□□□ -1.43
RNF20Q5VTR2 AL138889.2-201ENST00000603883 242 ntBASIC6.11□□□□□ -1.43
RNF20Q5VTR2 AL512329.2-201ENST00000607350 548 ntBASIC6.11□□□□□ -1.43
RNF20Q5VTR2 MIR6768-201ENST00000610734 72 ntBASIC6.11□□□□□ -1.43
RNF20Q5VTR2 RPSAP73-201ENST00000614820 330 ntBASIC6.11□□□□□ -1.43
RNF20Q5VTR2 MIR6864-201ENST00000617935 70 ntBASIC6.11□□□□□ -1.43
RNF20Q5VTR2 AC091925.2-201ENST00000625059 256 ntBASIC6.11□□□□□ -1.43
RNF20Q5VTR2 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC6.11□□□□□ -1.43
RNF20Q5VTR2 AC063976.2-201ENST00000425667 3556 ntBASIC6.11□□□□□ -1.43
RNF20Q5VTR2 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RNF20Q5VTR2 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RNF20Q5VTR2 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RNF20Q5VTR2 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RNF20Q5VTR2 AL731566.1-201ENST00000620490 1937 ntBASIC6.11□□□□□ -1.43
RNF20Q5VTR2 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RNF20Q5VTR2 MED23-203ENST00000368058 4576 ntTSL 5 BASIC6.11□□□□□ -1.43
RNF20Q5VTR2 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RNF20Q5VTR2 AC103710.2-202ENST00000641454 2853 ntBASIC6.1□□□□□ -1.43
RNF20Q5VTR2 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
RNF20Q5VTR2 U3.2-201ENST00000362981 210 ntBASIC6.1□□□□□ -1.43
RNF20Q5VTR2 RNU1-43P-201ENST00000365052 165 ntBASIC6.1□□□□□ -1.43
RNF20Q5VTR2 U3.29-201ENST00000391296 212 ntBASIC6.1□□□□□ -1.43
RNF20Q5VTR2 SNORA11.3-201ENST00000408471 128 ntBASIC6.1□□□□□ -1.43
RNF20Q5VTR2 USMG5P1-201ENST00000425964 177 ntBASIC6.1□□□□□ -1.43
RNF20Q5VTR2 CEP57L1P1-201ENST00000430943 1201 ntBASIC6.1□□□□□ -1.43
RNF20Q5VTR2 AL353597.2-202ENST00000434901 373 ntBASIC6.1□□□□□ -1.43
RNF20Q5VTR2 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC6.1□□□□□ -1.43
RNF20Q5VTR2 AC002553.2-201ENST00000453217 340 ntBASIC6.1□□□□□ -1.43
RNF20Q5VTR2 AC009127.1-201ENST00000467090 155 ntBASIC6.1□□□□□ -1.43
RNF20Q5VTR2 AC068781.1-201ENST00000488231 618 ntBASIC6.1□□□□□ -1.43
RNF20Q5VTR2 IL7R-208ENST00000511982 612 ntTSL 2 BASIC6.1□□□□□ -1.43
RNF20Q5VTR2 RNU6-27P-201ENST00000516146 107 ntBASIC6.1□□□□□ -1.43
RNF20Q5VTR2 DEFB108D-201ENST00000527787 222 ntBASIC6.1□□□□□ -1.43
RNF20Q5VTR2 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RNF20Q5VTR2 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC6.1□□□□□ -1.43
RNF20Q5VTR2 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.1□□□□□ -1.43
RNF20Q5VTR2 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC6.1□□□□□ -1.43
RNF20Q5VTR2 AL158032.1-201ENST00000605401 106 ntBASIC6.1□□□□□ -1.43
RNF20Q5VTR2 AP005432.2-201ENST00000608162 586 ntBASIC6.1□□□□□ -1.43
RNF20Q5VTR2 SNORA11.6-201ENST00000619030 128 ntBASIC6.1□□□□□ -1.43
RNF20Q5VTR2 BX005214.3-202ENST00000619809 325 ntBASIC6.1□□□□□ -1.43
RNF20Q5VTR2 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
RNF20Q5VTR2 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RNF20Q5VTR2 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RNF20Q5VTR2 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC6.1□□□□□ -1.43
RNF20Q5VTR2 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
RNF20Q5VTR2 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RNF20Q5VTR2 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
RNF20Q5VTR2 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RNF20Q5VTR2 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RNF20Q5VTR2 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC6.09□□□□□ -1.43
RNF20Q5VTR2 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
RNF20Q5VTR2 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
RNF20Q5VTR2 RNU6-946P-201ENST00000383878 107 ntBASIC6.09□□□□□ -1.43
RNF20Q5VTR2 RNU6-393P-201ENST00000384475 107 ntBASIC6.09□□□□□ -1.43
RNF20Q5VTR2 Y_RNA.552-201ENST00000384665 112 ntBASIC6.09□□□□□ -1.43
RNF20Q5VTR2 RNU6-95P-201ENST00000384697 107 ntBASIC6.09□□□□□ -1.43
RNF20Q5VTR2 DUTP5-201ENST00000406790 469 ntBASIC6.09□□□□□ -1.43
RNF20Q5VTR2 U3.32-201ENST00000408116 212 ntBASIC6.09□□□□□ -1.43
RNF20Q5VTR2 RNU2-21P-201ENST00000410368 188 ntBASIC6.09□□□□□ -1.43
RNF20Q5VTR2 RNU2-23P-201ENST00000410545 195 ntBASIC6.09□□□□□ -1.43
RNF20Q5VTR2 RNA5SP111-201ENST00000411386 101 ntBASIC6.09□□□□□ -1.43
RNF20Q5VTR2 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RNF20Q5VTR2 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC6.09□□□□□ -1.43
RNF20Q5VTR2 Z99755.1-201ENST00000414048 380 ntBASIC6.09□□□□□ -1.43
RNF20Q5VTR2 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC6.09□□□□□ -1.43
RNF20Q5VTR2 USP9YP30-201ENST00000430729 455 ntBASIC6.09□□□□□ -1.43
RNF20Q5VTR2 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC6.09□□□□□ -1.43
RNF20Q5VTR2 DYNLT3P2-201ENST00000442517 295 ntBASIC6.09□□□□□ -1.43
RNF20Q5VTR2 EEF1A1P1-201ENST00000447052 739 ntBASIC6.09□□□□□ -1.43
RNF20Q5VTR2 RNU7-167P-201ENST00000459160 62 ntBASIC6.09□□□□□ -1.43
RNF20Q5VTR2 AC008571.1-201ENST00000467232 300 ntBASIC6.09□□□□□ -1.43
RNF20Q5VTR2 AC016065.2-201ENST00000514530 444 ntBASIC6.09□□□□□ -1.43
RNF20Q5VTR2 IGLVIV-53-201ENST00000520107 367 ntBASIC6.09□□□□□ -1.43
RNF20Q5VTR2 AC131281.1-201ENST00000522984 164 ntBASIC6.09□□□□□ -1.43
RNF20Q5VTR2 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC6.09□□□□□ -1.43
RNF20Q5VTR2 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC6.09□□□□□ -1.43
RNF20Q5VTR2 APAF1-207ENST00000547743 651 ntTSL 3 BASIC6.09□□□□□ -1.43
RNF20Q5VTR2 AC007225.2-201ENST00000562529 256 ntBASIC6.09□□□□□ -1.43
RNF20Q5VTR2 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC6.09□□□□□ -1.43
RNF20Q5VTR2 AC114947.2-201ENST00000565748 2125 ntBASIC6.09□□□□□ -1.43
RNF20Q5VTR2 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RNF20Q5VTR2 AC123786.2-201ENST00000603459 275 ntBASIC6.09□□□□□ -1.43
RNF20Q5VTR2 AC126915.2-201ENST00000610957 190 ntBASIC6.09□□□□□ -1.43
RNF20Q5VTR2 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC6.09□□□□□ -1.43
RNF20Q5VTR2 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC6.09□□□□□ -1.43
RNF20Q5VTR2 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC6.09□□□□□ -1.43
RNF20Q5VTR2 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms