Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 MIR4308-201ENST00000580634 81 ntBASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 AC006254.2-201ENST00000603259 279 ntBASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 MIR6826-201ENST00000617808 98 ntBASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 AC004158.1-201ENST00000564508 4319 ntBASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNFT1Q5M7Z0 MTND5P9-201ENST00000503854 1755 ntBASIC5.29□□□□□ -1.56
RNFT1Q5M7Z0 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RNFT1Q5M7Z0 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.29□□□□□ -1.56
RNFT1Q5M7Z0 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNFT1Q5M7Z0 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RNFT1Q5M7Z0 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNFT1Q5M7Z0 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNFT1Q5M7Z0 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.29□□□□□ -1.56
RNFT1Q5M7Z0 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.29□□□□□ -1.56
RNFT1Q5M7Z0 BMS1P17-202ENST00000416720 316 ntBASIC5.29□□□□□ -1.56
RNFT1Q5M7Z0 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.29□□□□□ -1.56
RNFT1Q5M7Z0 AL663074.2-201ENST00000440621 479 ntBASIC5.29□□□□□ -1.56
RNFT1Q5M7Z0 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.29□□□□□ -1.56
RNFT1Q5M7Z0 AC079168.2-201ENST00000453977 416 ntBASIC5.29□□□□□ -1.56
RNFT1Q5M7Z0 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.29□□□□□ -1.56
RNFT1Q5M7Z0 RPS18P6-201ENST00000476880 458 ntBASIC5.29□□□□□ -1.56
RNFT1Q5M7Z0 RN7SL466P-201ENST00000497546 295 ntBASIC5.29□□□□□ -1.56
RNFT1Q5M7Z0 AC093840.1-201ENST00000511599 336 ntBASIC5.29□□□□□ -1.56
RNFT1Q5M7Z0 Y_RNA.689-201ENST00000516589 107 ntBASIC5.29□□□□□ -1.56
RNFT1Q5M7Z0 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.29□□□□□ -1.56
RNFT1Q5M7Z0 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.29□□□□□ -1.56
RNFT1Q5M7Z0 MIR132-201ENST00000591554 101 ntBASIC5.29□□□□□ -1.56
RNFT1Q5M7Z0 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.29□□□□□ -1.56
RNFT1Q5M7Z0 BDH2P1-201ENST00000602288 736 ntBASIC5.29□□□□□ -1.56
RNFT1Q5M7Z0 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.29□□□□□ -1.56
RNFT1Q5M7Z0 AL008718.3-201ENST00000610217 321 ntBASIC5.29□□□□□ -1.56
RNFT1Q5M7Z0 AC240442.1-201ENST00000616055 283 ntBASIC5.29□□□□□ -1.56
RNFT1Q5M7Z0 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNFT1Q5M7Z0 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNFT1Q5M7Z0 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
RNFT1Q5M7Z0 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
RNFT1Q5M7Z0 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.29□□□□□ -1.56
RNFT1Q5M7Z0 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNFT1Q5M7Z0 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNFT1Q5M7Z0 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RNFT1Q5M7Z0 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.29□□□□□ -1.56
RNFT1Q5M7Z0 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.29□□□□□ -1.56
RNFT1Q5M7Z0 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.29□□□□□ -1.56
RNFT1Q5M7Z0 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.29□□□□□ -1.56
RNFT1Q5M7Z0 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNFT1Q5M7Z0 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNFT1Q5M7Z0 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNFT1Q5M7Z0 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RNFT1Q5M7Z0 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNFT1Q5M7Z0 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNFT1Q5M7Z0 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.28□□□□□ -1.56
RNFT1Q5M7Z0 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNFT1Q5M7Z0 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNFT1Q5M7Z0 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNFT1Q5M7Z0 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNFT1Q5M7Z0 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
RNFT1Q5M7Z0 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNFT1Q5M7Z0 RN7SKP160-201ENST00000363804 340 ntBASIC5.28□□□□□ -1.56
RNFT1Q5M7Z0 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
RNFT1Q5M7Z0 OR3A2-201ENST00000408891 1076 ntBASIC5.28□□□□□ -1.56
RNFT1Q5M7Z0 AC113412.1-201ENST00000425840 504 ntBASIC5.28□□□□□ -1.56
RNFT1Q5M7Z0 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.28□□□□□ -1.56
RNFT1Q5M7Z0 PPIAP13-201ENST00000434706 478 ntBASIC5.28□□□□□ -1.56
RNFT1Q5M7Z0 AC023141.8-201ENST00000442554 208 ntBASIC5.28□□□□□ -1.56
RNFT1Q5M7Z0 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.28□□□□□ -1.56
RNFT1Q5M7Z0 AL162739.1-201ENST00000450606 307 ntBASIC5.28□□□□□ -1.56
RNFT1Q5M7Z0 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.28□□□□□ -1.56
RNFT1Q5M7Z0 AC016065.2-201ENST00000514530 444 ntBASIC5.28□□□□□ -1.56
RNFT1Q5M7Z0 IGKV2-19-201ENST00000518132 283 ntBASIC5.28□□□□□ -1.56
RNFT1Q5M7Z0 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.28□□□□□ -1.56
RNFT1Q5M7Z0 MIR4679-2-201ENST00000578358 77 ntBASIC5.28□□□□□ -1.56
RNFT1Q5M7Z0 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.28□□□□□ -1.56
RNFT1Q5M7Z0 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RNFT1Q5M7Z0 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNFT1Q5M7Z0 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNFT1Q5M7Z0 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RNFT1Q5M7Z0 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNFT1Q5M7Z0 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.28□□□□□ -1.56
RNFT1Q5M7Z0 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNFT1Q5M7Z0 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNFT1Q5M7Z0 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RNFT1Q5M7Z0 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RNFT1Q5M7Z0 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RNFT1Q5M7Z0 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 SRRM1P3-201ENST00000426911 2678 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms