Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AL390237.1-201ENST00000404226 1415 ntBASIC4.08□□□□□ -1.76
CCDC38Q502W7 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC38Q502W7 HSPE1P12-201ENST00000412576 301 ntBASIC4.08□□□□□ -1.76
CCDC38Q502W7 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.08□□□□□ -1.76
CCDC38Q502W7 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC38Q502W7 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC38Q502W7 AC099563.1-201ENST00000456086 418 ntBASIC4.08□□□□□ -1.76
CCDC38Q502W7 HMGN2P16-201ENST00000456802 261 ntBASIC4.08□□□□□ -1.76
CCDC38Q502W7 CEACAMP4-201ENST00000457676 421 ntBASIC4.08□□□□□ -1.76
CCDC38Q502W7 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC38Q502W7 AC105914.1-201ENST00000511798 226 ntBASIC4.08□□□□□ -1.76
CCDC38Q502W7 SNORA31.22-201ENST00000517204 135 ntBASIC4.08□□□□□ -1.76
CCDC38Q502W7 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC38Q502W7 AC008489.1-201ENST00000524271 483 ntBASIC4.08□□□□□ -1.76
CCDC38Q502W7 AC007115.1-201ENST00000546853 234 ntBASIC4.08□□□□□ -1.76
CCDC38Q502W7 AL133153.1-201ENST00000557756 303 ntBASIC4.08□□□□□ -1.76
CCDC38Q502W7 ZNF192P1-203ENST00000565888 810 ntBASIC4.08□□□□□ -1.76
CCDC38Q502W7 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC38Q502W7 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.08□□□□□ -1.76
CCDC38Q502W7 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC38Q502W7 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC38Q502W7 MIR3939-201ENST00000582614 106 ntBASIC4.08□□□□□ -1.76
CCDC38Q502W7 AC005771.1-201ENST00000585581 349 ntBASIC4.08□□□□□ -1.76
CCDC38Q502W7 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC38Q502W7 AL020997.2-201ENST00000602607 184 ntBASIC4.08□□□□□ -1.76
CCDC38Q502W7 AC087752.4-201ENST00000605911 462 ntBASIC4.08□□□□□ -1.76
CCDC38Q502W7 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC38Q502W7 AL592295.2-201ENST00000612578 206 ntBASIC4.08□□□□□ -1.76
CCDC38Q502W7 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC38Q502W7 AC008121.2-201ENST00000614647 523 ntBASIC4.08□□□□□ -1.76
CCDC38Q502W7 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC38Q502W7 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC38Q502W7 RNU5A-8P-201ENST00000364102 114 ntBASIC4.07□□□□□ -1.76
CCDC38Q502W7 RN7SKP227-201ENST00000364445 330 ntBASIC4.07□□□□□ -1.76
CCDC38Q502W7 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC38Q502W7 AC068538.1-201ENST00000376856 336 ntBASIC4.07□□□□□ -1.76
CCDC38Q502W7 AL109755.1-201ENST00000401791 649 ntBASIC4.07□□□□□ -1.76
CCDC38Q502W7 AL356967.1-201ENST00000406305 431 ntBASIC4.07□□□□□ -1.76
CCDC38Q502W7 FCF1P10-201ENST00000407590 479 ntBASIC4.07□□□□□ -1.76
CCDC38Q502W7 RN7SKP33-201ENST00000410942 340 ntBASIC4.07□□□□□ -1.76
CCDC38Q502W7 HMGN1P14-201ENST00000412459 517 ntBASIC4.07□□□□□ -1.76
CCDC38Q502W7 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC38Q502W7 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC38Q502W7 OR5BE1P-201ENST00000425977 939 ntBASIC4.07□□□□□ -1.76
CCDC38Q502W7 BX890604.2-201ENST00000427883 474 ntBASIC4.07□□□□□ -1.76
CCDC38Q502W7 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC38Q502W7 AP000936.2-201ENST00000447151 681 ntBASIC4.07□□□□□ -1.76
CCDC38Q502W7 MTND1P29-201ENST00000448112 647 ntBASIC4.07□□□□□ -1.76
CCDC38Q502W7 AL162389.1-201ENST00000449233 177 ntBASIC4.07□□□□□ -1.76
CCDC38Q502W7 PDSS1P2-201ENST00000449397 678 ntBASIC4.07□□□□□ -1.76
CCDC38Q502W7 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC38Q502W7 RNU6-956P-201ENST00000458868 103 ntBASIC4.07□□□□□ -1.76
CCDC38Q502W7 AC010424.1-201ENST00000506336 297 ntBASIC4.07□□□□□ -1.76
CCDC38Q502W7 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC38Q502W7 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC38Q502W7 RN7SKP122-201ENST00000515923 296 ntBASIC4.07□□□□□ -1.76
CCDC38Q502W7 SNORA31.9-201ENST00000516429 84 ntBASIC4.07□□□□□ -1.76
CCDC38Q502W7 AP003467.2-201ENST00000520175 319 ntBASIC4.07□□□□□ -1.76
CCDC38Q502W7 ERHP1-201ENST00000523006 310 ntBASIC4.07□□□□□ -1.76
CCDC38Q502W7 AP003730.1-201ENST00000524605 285 ntBASIC4.07□□□□□ -1.76
CCDC38Q502W7 AP000873.5-201ENST00000533906 236 ntBASIC4.07□□□□□ -1.76
CCDC38Q502W7 CCNG2P1-201ENST00000549521 1000 ntBASIC4.07□□□□□ -1.76
CCDC38Q502W7 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC38Q502W7 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC38Q502W7 RNU6-87P-201ENST00000607561 108 ntBASIC4.07□□□□□ -1.76
CCDC38Q502W7 AC012531.5-201ENST00000611375 151 ntBASIC4.07□□□□□ -1.76
CCDC38Q502W7 AC024941.1-201ENST00000612250 334 ntBASIC4.07□□□□□ -1.76
CCDC38Q502W7 AC090970.3-201ENST00000612566 866 ntBASIC4.07□□□□□ -1.76
CCDC38Q502W7 TUG1_2.1-201ENST00000614234 87 ntBASIC4.07□□□□□ -1.76
CCDC38Q502W7 AL603758.1-201ENST00000618654 241 ntBASIC4.07□□□□□ -1.76
CCDC38Q502W7 OR5BE1P-202ENST00000641168 1176 ntBASIC4.07□□□□□ -1.76
CCDC38Q502W7 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC38Q502W7 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC38Q502W7 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC38Q502W7 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC38Q502W7 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC38Q502W7 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC38Q502W7 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
CCDC38Q502W7 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC38Q502W7 SNORD6-201ENST00000365444 73 ntBASIC4.06□□□□□ -1.76
CCDC38Q502W7 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.06□□□□□ -1.76
CCDC38Q502W7 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.06□□□□□ -1.76
CCDC38Q502W7 RNU6-328P-201ENST00000390887 106 ntBASIC4.06□□□□□ -1.76
CCDC38Q502W7 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC38Q502W7 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC38Q502W7 RPL17P49-201ENST00000443728 411 ntBASIC4.06□□□□□ -1.76
CCDC38Q502W7 AL500522.2-201ENST00000448562 343 ntBASIC4.06□□□□□ -1.76
CCDC38Q502W7 SSXP1-201ENST00000453640 473 ntBASIC4.06□□□□□ -1.76
CCDC38Q502W7 AC108059.3-201ENST00000456388 214 ntBASIC4.06□□□□□ -1.76
CCDC38Q502W7 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.06□□□□□ -1.76
CCDC38Q502W7 OR9M1P-201ENST00000459641 921 ntBASIC4.06□□□□□ -1.76
CCDC38Q502W7 RPL38P1-201ENST00000460914 211 ntBASIC4.06□□□□□ -1.76
CCDC38Q502W7 AC004801.2-202ENST00000463559 283 ntBASIC4.06□□□□□ -1.76
CCDC38Q502W7 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC38Q502W7 AC020893.1-201ENST00000502452 580 ntBASIC4.06□□□□□ -1.76
CCDC38Q502W7 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC38Q502W7 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC38Q502W7 AL391156.1-201ENST00000554965 554 ntBASIC4.06□□□□□ -1.76
CCDC38Q502W7 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC38Q502W7 AL157394.1-201ENST00000562983 1224 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms