Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.73□□□□□ -2.13
CACNA1EQ15878 AC104581.2-201ENST00000572227 430 ntBASIC1.73□□□□□ -2.13
CACNA1EQ15878 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC1.73□□□□□ -2.13
CACNA1EQ15878 MIR4285-201ENST00000581001 85 ntBASIC1.73□□□□□ -2.13
CACNA1EQ15878 AC009318.3-201ENST00000616916 503 ntBASIC1.73□□□□□ -2.13
CACNA1EQ15878 AC012150.2-201ENST00000621300 544 ntBASIC1.73□□□□□ -2.13
CACNA1EQ15878 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CACNA1EQ15878 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.72□□□□□ -2.13
CACNA1EQ15878 Y_RNA.295-201ENST00000364918 102 ntBASIC1.72□□□□□ -2.13
CACNA1EQ15878 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CACNA1EQ15878 AL121972.1-201ENST00000402023 252 ntBASIC1.72□□□□□ -2.13
CACNA1EQ15878 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.72□□□□□ -2.13
CACNA1EQ15878 AF274854.1-201ENST00000413236 615 ntBASIC1.72□□□□□ -2.13
CACNA1EQ15878 AC104332.2-201ENST00000429959 156 ntBASIC1.72□□□□□ -2.13
CACNA1EQ15878 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.72□□□□□ -2.13
CACNA1EQ15878 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.72□□□□□ -2.13
CACNA1EQ15878 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.72□□□□□ -2.13
CACNA1EQ15878 CFTRP1-201ENST00000456646 183 ntBASIC1.72□□□□□ -2.13
CACNA1EQ15878 RPS29P12-201ENST00000460178 152 ntBASIC1.72□□□□□ -2.13
CACNA1EQ15878 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC1.72□□□□□ -2.13
CACNA1EQ15878 AC012170.1-201ENST00000495139 359 ntBASIC1.72□□□□□ -2.13
CACNA1EQ15878 GTF2IP9-201ENST00000502460 301 ntBASIC1.72□□□□□ -2.13
CACNA1EQ15878 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC1.72□□□□□ -2.13
CACNA1EQ15878 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.72□□□□□ -2.13
CACNA1EQ15878 SNORA25.15-201ENST00000516487 89 ntBASIC1.72□□□□□ -2.13
CACNA1EQ15878 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC1.72□□□□□ -2.13
CACNA1EQ15878 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.72□□□□□ -2.13
CACNA1EQ15878 AC092954.1-201ENST00000609121 445 ntBASIC1.72□□□□□ -2.13
CACNA1EQ15878 Z82195.2-201ENST00000612348 18351 ntBASIC1.72□□□□□ -2.13
CACNA1EQ15878 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
CACNA1EQ15878 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.72□□□□□ -2.13
CACNA1EQ15878 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CACNA1EQ15878 AC007390.1-201ENST00000415722 356 ntBASIC1.72□□□□□ -2.13
CACNA1EQ15878 TOMM22P1-201ENST00000418578 312 ntBASIC1.72□□□□□ -2.13
CACNA1EQ15878 SSXP1-201ENST00000453640 473 ntBASIC1.72□□□□□ -2.13
CACNA1EQ15878 AMD1P1-201ENST00000457220 922 ntBASIC1.72□□□□□ -2.13
CACNA1EQ15878 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.72□□□□□ -2.13
CACNA1EQ15878 MTND4LP22-201ENST00000508209 276 ntBASIC1.72□□□□□ -2.13
CACNA1EQ15878 COX6CP5-201ENST00000527162 228 ntBASIC1.72□□□□□ -2.13
CACNA1EQ15878 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.72□□□□□ -2.13
CACNA1EQ15878 AC090751.1-201ENST00000566966 267 ntBASIC1.72□□□□□ -2.13
CACNA1EQ15878 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.72□□□□□ -2.13
CACNA1EQ15878 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC1.72□□□□□ -2.13
CACNA1EQ15878 AC116447.1-201ENST00000613153 453 ntBASIC1.72□□□□□ -2.13
CACNA1EQ15878 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CACNA1EQ15878 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CACNA1EQ15878 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.71□□□□□ -2.14
CACNA1EQ15878 MIR1323-201ENST00000408090 73 ntBASIC1.71□□□□□ -2.14
CACNA1EQ15878 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.71□□□□□ -2.14
CACNA1EQ15878 RAD23BP2-201ENST00000416003 1207 ntBASIC1.71□□□□□ -2.14
CACNA1EQ15878 AC009237.2-201ENST00000421358 284 ntBASIC1.71□□□□□ -2.14
CACNA1EQ15878 TRAPPC2P5-201ENST00000426293 308 ntBASIC1.71□□□□□ -2.14
CACNA1EQ15878 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC1.71□□□□□ -2.14
CACNA1EQ15878 RPL39P40-201ENST00000445481 146 ntBASIC1.71□□□□□ -2.14
CACNA1EQ15878 VN1R96P-201ENST00000446052 858 ntBASIC1.71□□□□□ -2.14
CACNA1EQ15878 AC092754.2-201ENST00000463506 460 ntBASIC1.71□□□□□ -2.14
CACNA1EQ15878 AC107398.1-201ENST00000486904 505 ntBASIC1.71□□□□□ -2.14
CACNA1EQ15878 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.71□□□□□ -2.14
CACNA1EQ15878 RNU1-40P-201ENST00000516816 164 ntBASIC1.71□□□□□ -2.14
CACNA1EQ15878 RNU1-97P-201ENST00000516872 164 ntBASIC1.71□□□□□ -2.14
CACNA1EQ15878 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC1.71□□□□□ -2.14
CACNA1EQ15878 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC1.71□□□□□ -2.14
CACNA1EQ15878 ZNF192P1-203ENST00000565888 810 ntBASIC1.71□□□□□ -2.14
CACNA1EQ15878 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.71□□□□□ -2.14
CACNA1EQ15878 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.71□□□□□ -2.14
CACNA1EQ15878 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.71□□□□□ -2.14
CACNA1EQ15878 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
CACNA1EQ15878 RNU6-342P-201ENST00000384521 104 ntBASIC1.71□□□□□ -2.14
CACNA1EQ15878 HMGB1P13-201ENST00000406019 642 ntBASIC1.71□□□□□ -2.14
CACNA1EQ15878 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC1.71□□□□□ -2.14
CACNA1EQ15878 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.71□□□□□ -2.14
CACNA1EQ15878 AL590664.1-201ENST00000448065 339 ntBASIC1.71□□□□□ -2.14
CACNA1EQ15878 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC1.71□□□□□ -2.14
CACNA1EQ15878 OR4P1P-201ENST00000530808 1136 ntBASIC1.71□□□□□ -2.14
CACNA1EQ15878 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
CACNA1EQ15878 AL359740.1-201ENST00000624340 592 ntBASIC1.71□□□□□ -2.14
CACNA1EQ15878 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
CACNA1EQ15878 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CACNA1EQ15878 AL391987.6-201ENST00000305671 199 ntBASIC1.7□□□□□ -2.14
CACNA1EQ15878 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC1.7□□□□□ -2.14
CACNA1EQ15878 RPL23AP7-203ENST00000449021 469 ntBASIC1.7□□□□□ -2.14
CACNA1EQ15878 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.7□□□□□ -2.14
CACNA1EQ15878 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.7□□□□□ -2.14
CACNA1EQ15878 AL135786.2-201ENST00000608422 615 ntBASIC1.7□□□□□ -2.14
CACNA1EQ15878 VN1R74P-201ENST00000613259 503 ntBASIC1.7□□□□□ -2.14
CACNA1EQ15878 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC1.7□□□□□ -2.14
CACNA1EQ15878 MIR3199-2-201ENST00000636243 86 ntBASIC1.7□□□□□ -2.14
CACNA1EQ15878 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC1.7□□□□□ -2.14
CACNA1EQ15878 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC1.7□□□□□ -2.14
CACNA1EQ15878 MFF-206ENST00000392059 1710 ntTSL 5 BASIC1.7□□□□□ -2.14
CACNA1EQ15878 CKAP2P1-201ENST00000555477 2049 ntBASIC1.7□□□□□ -2.14
CACNA1EQ15878 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
CACNA1EQ15878 RNA5SP138-201ENST00000365098 114 ntBASIC1.69□□□□□ -2.14
CACNA1EQ15878 AC004965.1-201ENST00000413033 213 ntBASIC1.69□□□□□ -2.14
CACNA1EQ15878 EIF1AXP1-201ENST00000419267 435 ntBASIC1.69□□□□□ -2.14
CACNA1EQ15878 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.69□□□□□ -2.14
CACNA1EQ15878 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC1.69□□□□□ -2.14
CACNA1EQ15878 ATP5EP1-201ENST00000510257 156 ntBASIC1.69□□□□□ -2.14
CACNA1EQ15878 AC087441.2-201ENST00000529141 262 ntBASIC1.69□□□□□ -2.14
CACNA1EQ15878 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms